Salvelinus fontinalis (brook trout): 129821932
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Entry
129821932 CDS
T11136
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129821932
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129821932
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
DUF1233
Motif
Other DBs
NCBI-GeneID:
129821932
NCBI-ProteinID:
XP_055735655
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All DBs
Position
24:complement(12127477..12189835)
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AA seq
523 aa
AA seq
DB search
MMAGGAVQQNGGFLNPHHHNQQPHMESDPPDSRKRPLETPTEASSTKRTNTGVAFLQPLF
ETEGIVFPHQESHSEAHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS
KDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSSQKSEPVSILQPQTTVNPDRIK
QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRK
AVEIIVQKIQEDPQSSSCLNISYSNISGPVANSNPTGSPYANSAEVNPAAAAAAAATASS
LLGQATMQSMGGFPTTMGPSFSGNDLLTITSALNTLASYGYNTNSLGLGLNPAAASGVLA
AVAASANPAAAAAANLLASYASDASTSASHQAASLGGFTLGSLAAATGATNGYLSASSPL
MAQSLMATEKQMQEGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFI
PGTRNRKVTITGSPASTQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggcggagcagtacagcaaaacgggggtttcttgaatcctcaccatcacaat
caacagccgcacatggagtcggatcccccagattcgcgtaaaagaccgctagagacccca
actgaggcaagcagcactaaacgcacaaacacgggagtggccttcctgcagccccttttt
gaaactgaaggcattgtattccctcaccaggaatcacactctgaggcacatgaggaaggt
gagtacttcctgaaggttctgatccccagctatgcggccggctccatcatcggcaagggc
ggacagaccatcgtccagctgcagaaagagaccggcgccaccatcaagctgtccaaatcc
aaagacttttaccctggcacgacagagcgggtgtgtctgatccaggggacagtggaggct
ctgaatggagtccataacttcatcgctgagaaggtgcgggagatgccgcagagcagccag
aaatcagaaccggtcagcatactgcagccacagaccaccgtcaaccctgaccgcatcaaa
caggccaagctgatagtaccaaacagcacagcaggtctgatcattggtaaaggtggagcc
acagtcaaggccgtcatggaacagtcgggcgcctgggtgcagctctcccaaaaaccagag
ggcatcaacctgcaggagcgcgtggtcaccattagcggagagcccgagcagaaccgtaaa
gccgtggagatcatcgttcagaagatccaagaggacccccagagcagcagctgcctcaac
atcagctactccaacatctctggccctgttgccaactccaaccccaccggctccccctac
gccaactcagccgaggtgaaccccgctgctgctgctgctgccgctgccacagcctccagc
ctcctgggtcaggccaccatgcagagtatgggcggcttccccaccaccatgggtcccagc
ttctcaggcaacgacctcttgaccatcacctctgccctcaacacgttagccagctacggc
tacaacaccaactccctgggcctggggctcaaccccgccgcagcctcaggagtcctggcc
gccgtagcggctagcgctaaccccgccgcggctgccgctgctaacctcctggcgtcctac
gccagcgatgcctccaccagcgcaagccaccaggccgcctccctgggaggtttcaccctg
ggctcgctggccgcggccacgggggccaccaacggctacctgagtgcctcatccccgctg
atggcacaatccctgatggccactgagaagcagatgcaggagggggccaaggacgtggtg
gagatcgctgttcccgaaaacctggtaggagccatcttggggaaaggagggaaaacgcta
gtggagtaccaggagctgactggagcccggatccagatctccaaaaagggagagttcatt
cccggcacccggaaccgtaaagttaccataaccggctctccggcgtcaacgcaggcagct
cagtatctgatcagccaacggatcacgtatgagcagggtgtgcgcgccaccaacccacag
aaggtgggctag
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