Salvelinus fontinalis (brook trout): 129821965
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Entry
129821965 CDS
T11136
Name
(RefSeq) gem-associated protein 4-like
KO
K13132
gem associated protein 4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129821965
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
129821965
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Paralog
GFIT
Motif
Pfam:
TPR_Edg1
Abhydrolase_8
Motif
Other DBs
NCBI-GeneID:
129821965
NCBI-ProteinID:
XP_055735724
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All DBs
Position
24:complement(13477665..13483915)
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AA seq
1088 aa
AA seq
DB search
MMTQDSWLSCEKTAVLQGGFLLANRLCQPASLSALQKEDWSKVGHPILQAVREICGQERG
SGLSSVRWKKKIICVLWSKLLGRESEEDMEIGWRENPFFSLQNSLPDINRIVLFELVKLT
GFSQIYAQLLLCLPSANLSAELEELVQHVTRNSTEEDVRVLLEVWWELWKGRGGRQEEDD
LDKVFTNQWTRLTNTTGLSPQAAKRFKSDPDTPISPPSTTDVLSIFFHALEEMKEHLSTS
DLCYRALSNCLDSLYTSHLIDQAIILPAEVQLQSLTSAVTVRKRCVGIEKFDLVQVISEA
HSDLKAAHTPSQFRPCGMTLMQALQTVSQLTQAWEKRGLLEMTDSGDTSDLAHRLKNSLA
RVLESLEERSMSETMDEGERQTLNNVHSTLRGLLVSLSFPDTESNAEEMAHIAVAIINHR
LEGFQDFTMLFATELSWSLSMEEWISCLERNKTTFQRKDIVMKLVSTLIVKCQMDSEVDH
CRKLKDIIVNIFAELPLAEKNTTLAEMLTCSKRGLQGSLPLAVMEGFSEELNMTFNCIIQ
GRAVQNNLSLAVAAIARVAFQNPEATLRRCCHLAVVNHGAHSLLSNILQQLSGLRGGAPG
CTEGTGSSAGSLLCSCLQDTAMTKLSSAKEEDQFLHFLVALMQPSISESSERGQSFLHPE
EVVCAFVLPHLSPSSGYSTCSLELCLRLLHSAFSLESQDLSPHWVMNCSPFPLLYVLCQI
LNEGCRCWELPVEGAPHHLSTESKEMLVTVLTALGKVVGREVASAPNTWSRALFWLYNKV
EALDWTVRFHLKVVWGDHFKNEVPSSLLAVCELPEQEWSGLKLARYGQGTGLVAWMECCA
LSDEVQDTMLTSLALDQHRPDDVNMFSKGLLVAVTQTLPWCTITEWGRLLRAMRELLRSG
RLHVPYSLEYVDFLPLLDLRPFSCELRLSVLLLRVLQLLCGTSCKDWLPGQGWAHVGLLY
ASAMREVIDSLRGKLSPSSSNTSPKDSKVERAATTTASQEVLFVLSQLFCHVQHVHVMMP
GGQCESLFLCALEILTHYEAVLAAHPSSSSHLETENTRHFFTTITDNLESAEMKAVLHQK
IAQLSSSG
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcaagattcctggctgagctgtgagaagactgccgttctccagggaggcttt
ctgttggccaacaggttatgccagccagcgtcactcagtgccctgcagaaggaggactgg
agtaaggttggccacccaattctacaggctgtcagagaaatttgtggtcaggagcgaggt
agcggtctgagcagtgtccgctggaagaagaaaatcatctgcgtcttatggagcaaatta
ctggggcgggagagcgaagaagacatggaaattggctggagggagaatccattcttctct
ctgcagaacagcctacctgacattaaccgcatagtgctgtttgagctggtcaagttgaca
ggcttctctcagatctacgcccagctgctgctttgcctcccatcggcaaacctgagtgca
gagctagaggagctagttcaacacgttacccgaaacagcactgaggaggatgtccgcgtc
ctgctggaggtgtggtgggagctgtggaagggcagggggggaaggcaagaggaggacgac
ctagataaggtctttactaaccagtggacccgcctcaccaacaccaccggcctttcacct
caggctgccaagaggttcaagtcagacccagacaccccaatatcaccaccatccaccact
gatgtgctgtccatttttttccatgctctggaggagatgaaagagcatttgagcacctct
gacctttgctaccgtgccctatccaactgcctcgactccctgtacacctcgcatctgata
gaccaagctatcatcctcccagctgaggtgcaacttcagagcctgaccagtgcagtgact
gtcagaaagaggtgtgttgggatagagaagtttgacctggtccaagtgataagtgaggcc
cacagtgacctgaaggcagcccacacaccttctcagtttagaccctgtggaatgacacta
atgcaagccctgcagactgtctcacagctcactcaggcctgggagaagagagggctgctg
gagatgacagacagcggtgacaccagtgacttggcacaccgtttgaaaaacagtctggcc
agagtgctcgagtccctagaggaacggtccatgtctgagaccatggatgagggtgagcgc
cagacactgaacaatgtgcacagcactttgagaggcttgttagtctcactgtccttcccc
gacacagagagcaacgctgaggaaatggcccacattgccgtagccatcattaaccaccgc
ttggagggcttccaagatttcactatgctatttgccactgaactgagctggtccctgagc
atggaggagtggatcagctgtctggagagaaacaaaaccacattccagcgaaaggacatt
gtcatgaaattagtctccactctcattgtaaagtgccaaatggatagtgaagtagaccac
tgcagaaagctgaaggacattattgtgaacattttcgcagagctccccttagctgagaaa
aacacaacgttagcggaaatgttaacctgctccaagaggggtctccagggctctctgccc
ctggctgtgatggagggctttagtgaggagctcaacatgacgttcaactgcatcatccag
gggcgagcggtgcagaacaacctcagcttggccgtggccgccatagcccgcgtggccttt
cagaaccccgaggccaccctgcgtcggtgctgccatctggcggtggtgaaccatggggcc
cacagcctcctctccaacatactccagcagctctcagggctgaggggcggtgcccccggt
tgcacagaggggacgggcagctctgcggggagcttactgtgcagctgtcttcaagatact
gccatgactaaactgtcctcggctaaggaggaggaccagttcctgcacttcctggttgca
cttatgcagccgagcatctcggagagctcagagagaggccagagtttcctgcaccctgaa
gaggttgtgtgtgccttcgtcctgcctcacctctccccctcctctggctatagcacctgc
agcctggagctgtgcctgcgtttgctccactctgccttttctctggaatcccaggatcta
tctccacactgggtcatgaactgctccccgttccccctcctctacgtcctctgccagatt
ctgaacgagggctgcaggtgctgggagcttcctgtagagggcgcaccccaccacttatcc
acagagtccaaggagatgctcgtcactgtgctgactgcactgggcaaggtggtgggacgg
gaggtggcctcagcccccaacacctggtccagagccctcttctggctctacaataaagtg
gaggccctggactggactgttcgcttccatctgaaggtagtgtggggagatcacttcaaa
aacgaggtgccgtcctcactgttggctgtgtgcgagctgccggagcaggagtggtctggc
ctaaagttggcccggtatgggcagggcacagggctggtggcgtggatggagtgctgcgct
ctctctgacgaggttcaggacaccatgctgacctctctggctctggaccagcaccggccc
gacgacgtcaacatgttcagcaaaggcctgctggtggccgtgacacagaccctaccctgg
tgcaccatcaccgagtggggcaggctgctgagagccatgcgagagctgctccgctcaggc
cggctccacgtgccttactctctggagtatgtggactttctccccctgctggacctgcgg
ccgttctcctgcgagctgcgtctgtccgtgctactgctgcgtgtcctccagctgctctgc
ggcaccagctgcaaagactggctgcccggccagggctgggcccacgtggggctgctgtac
gccagcgccatgagagaggtcatagactccctgaggggaaagctgtcgccgtcttcctcc
aacacctcacccaaagactcaaaggtagagagggcagctaccaccaccgccagccaggag
gtgctgtttgtactgagccagctcttctgccatgttcagcacgttcatgtgatgatgccc
ggcgggcagtgcgagtctctgttcctgtgtgccctcgagatcctgacccactacgaggca
gtgctggccgcacaccccagcagcagctcccacctggagaccgagaacactcgccacttc
ttcaccaccatcacagacaacctggagagcgccgagatgaaggccgtgttgcatcagaaa
attgctcagctgtcgtcttcaggttga
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