KEGG   Salvelinus fontinalis (brook trout): 129822247
Entry
129822247         CDS       T11136                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03020  RNA polymerase
sfon03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129822247
  09124 Replication and repair
   03420 Nucleotide excision repair
    129822247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfon03021]
    129822247
   03400 DNA repair and recombination proteins [BR:sfon03400]
    129822247
Transcription machinery [BR:sfon03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     129822247
DNA repair and recombination proteins [BR:sfon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129822247
SSDB
Other DBs
NCBI-GeneID: 129822247
NCBI-ProteinID: XP_055736333
LinkDB
Position
24:28939387..28941902
AA seq 143 aa
MASSGGSTTTVGDIEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELSE
VFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSVE
GRFEDEELQQILDDIQTKRSFQY
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcgtccagtggcggttcaacaacaactgtcggagatattgaggaggacgcttctcag
ctacttttccccaaagagttcgagaacgcggagacacttctaaactctgaggtacacatg
ctcctggagcatcgcaagcagcagaacgagagtgcagaggacgaacaagagctatctgag
gtcttcatgaaaactctgaattatactgcacgtttcagccggttcaaaaacagagaaact
atcgccagtgttcgcagcttgctcttgcagaagaagctgcataagtttgagttagccagt
ttggccaacctttgtcctgaagcagcggaggaggccaaagccctcatccctagcgtggag
gggcgatttgaggatgaggagctccagcaaatccttgatgacattcagaccaagagaagt
ttccagtactga

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