Salvelinus fontinalis (brook trout): 129822317
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Entry
129822317 CDS
T11136
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129822317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129822317
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129822317
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
129822317
NCBI-ProteinID:
XP_055736476
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Position
24:32349948..32808763
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AA seq
415 aa
AA seq
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MEGDGSQAASGGTPNDSQHDPGKMFIGGLSWQTSPDSLRDYFTKFGEIRECMVMRDPTTK
RSRGFGFVTYVDAASVDNVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSA
NTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKM
VECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSY
QFPGFPATAYGPVAAAAVAAVRGSGRGARGRGGYMAYQQNAGAGFPDYGFYSGAGPSDLR
GPPCSFADFGSLGPHAAQMLQHSEHHATSACNSPLQHHLQHSPDPFKSPGTNQARPGAFP
GTNSPGPVADLYGTPSQDSGVGNYISAASPQPGSGFGHSIAQSISGGPGKTGRSF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgggagccaagccgcatctggaggaacccctaatgattcgcaacacgac
ccgggtaaaatgtttatcggtggcctcagctggcaaacttcgccagacagccttagagac
tattttactaaattcggggaaatcagagaatgtatggtgatgagagatccaacgacaaaa
cgctccaggggcttcggattcgttacttacgtagatgctgccagtgtagataacgtctta
gctcagcaacaccacgaattagactcaaaaacgatcgatcctaaagttgccttccctaga
cgtgctcagcccaagatggtcacaagaacaaagaaaatattcgtaggaggattatcagcg
aacacagtagttgaagatgtgaagcagtattttgaacagtttggcaaggtggaggacgcc
atgcttatgtttgacaaaacgactaacagacacagaggtttcggctttgtaacttttgag
gttgaggacattgtggagaaagtatgcgagatccactttcatgaaatcaataataaaatg
gtagaatgcaagaaggctcagcccaaggaggtgatgttcccaccgggtacgcgaggcagg
gccaggggcctgccctacaccatggacgccttcatgctggggatgggcatgctgagttac
ccaaacattgtagcaacgtatggccgtggatacactggttttgccccaagctacagctac
caattccctggcttcccagcgacggcgtatggaccggtggcagcagcggcagtggcggca
gtgcgtggctcaggtaggggggcccgtggaagaggtggctacatggcataccagcagaac
gcaggggcagggttcccagattatgggttctattccggggccgggcccagtgacctgcgg
gggccgccctgctcctttgccgactttggctccctggggccccatgctgctcagatgctg
cagcacagtgagcatcatgccacctccgcctgcaactcccccctccagcaccacctgcag
cacagcccggacccctttaagagcccaggcaccaaccaggccaggcccggagccttcccc
ggcaccaacagtcccgggcccgtggctgacctctatggcactcccagccaggactccggt
gtgggcaactacattagtgctgctagcccacagcctggctctggcttcggccacagcatt
gctcagagtatttcaggaggcccggggaagaccgggcggagtttttaa
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