Salvelinus fontinalis (brook trout): 129822337
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Entry
129822337 CDS
T11136
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit-like isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129822337
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfon01007
]
129822337
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129822337
Enzymes [BR:
sfon01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
129822337
Amino acid related enzymes [BR:
sfon01007
]
Aminoacyl-tRNA synthetase
Class II (U)
129822337
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129822337
Prokaryotic type
129822337
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
129822337
NCBI-ProteinID:
XP_055736526
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All DBs
Position
24:complement(34056085..34076161)
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AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFHALGRTYTDEEFDELCFEFGLELDEITSEKDIISREQGDTKAEGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKQKMEAPRYRRVSPANGEPQRLVITEETAAVRP
HAVAAVLRNITFTLERYDSFIELQEKLHQNVCRKRTLIAIGTHDLDTISGPFTYTAKPPG
DIRFKPLNQAKEYTAQELMSLYKTDSHLRHYLHIIEDKPVYPVIYDSNGIVLSMPPIING
DHSKISLNTKNVFIECTATDLTKAKIVLDMMVTMFCEYCEEPFTVEEAEVVYPDGRTFLY
PELAYRKETLSADFINRKVGISESTEHIAQLLTKMCLRSEVTSDGEQIEVEIPPTRSDVI
HACDIMEDAAMAYGFNNIPRTTPRTYTVANQLPLNKLSELLRQDLAAAGFTEALTFALCS
QEDIADKLLKNISETRACHISNPKTAEFQVARTTLLSGLLKTVAANRKMPLPLRLFEISD
VVLKDETKDVGARNNRRLCAVYYNKSPGFEVIHGLMDRVMQLLEVKPGQGNGYHIQAADD
STFFPGRCAEIFARGKSIGRLGVLHPNVINHFELTMPCSALDIDIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagtgtcaaaagggatcttctgttccatgccttgggcagaacatacact
gatgaagaatttgatgagttgtgttttgagtttggactggagcttgatgagattacctca
gagaaggacatcatcagtcgtgagcagggggacaccaaggcagagggggcatctgatgtg
attctgtataagattgatgtcccagctaaccgctatgacctgctgtgtctggaagggctg
gtcaggggcctgcaggtcttcaagcagaagatggaagcacctcgctacaggcgtgtgagt
ccagccaacggagagcctcagaggctggtcatcacagaggagacggctgctgtgcgaccc
cacgctgtggctgcagttttgagaaacatcaccttcacactggaacgctacgacagcttt
atcgaactacaggagaaactccatcagaacgtctgtaggaaaaggactctgattgccatc
ggcacccatgatctggacaccatttcaggccccttcacctacacagccaaaccacctggt
gacatccgcttcaaacctctcaaccaggcaaaggagtacaccgcacaggaactcatgagc
ctctacaagacagacagccacttgcgacactatctgcacattattgaagacaagcctgta
tatcctgtcatctatgacagcaacggcattgtactgtctatgcctccaatcatcaatggg
gaccattccaaaatctccttgaatacaaagaatgtttttatcgagtgcacagccactgat
cttaccaaggcaaaaatcgtgttggacatgatggtgacgatgttctgcgagtattgtgag
gagcctttcacggtagaggaggctgaggtggtgtacccagatggcaggaccttcctgtac
ccggagctggcttacaggaaggagactctgtcagcagacttcatcaaccgcaaagttggc
atcagtgagtcgactgagcacatcgcccagctgttgaccaagatgtgcttgcgctcagag
gtcacaagcgacggcgaacagatcgaggtggagatcccgcccacgcgctctgacgtcatc
cacgcctgtgacatcatggaggacgccgccatggcgtatggtttcaacaatattccccgc
accacgccgcgcacctataccgtagccaatcagctcccactgaataagctgtcagagctg
ctgagacaggacctggctgctgctggattcacagaggccctcaccttcgccctgtgttct
caggaggacatagctgacaagctgttgaagaacatctcagagaccagagcatgtcacatc
tccaaccccaagacagctgagttccaggtggcgcgcaccaccctgctgtcaggcctgctg
aagactgttgctgccaacaggaagatgcctctgcctctgaggctgtttgagatttcagac
gtggtgctcaaggatgaaaccaaagatgtgggggccaggaacaaccgtcgtctgtgtgct
gtctactacaacaagagtcctgggtttgaggtgatccacggcctgatggacagggtcatg
cagctgctggaggtcaaaccaggccagggcaatggctaccacatccaggctgccgacgat
tccaccttcttccctggtcgctgtgctgagatctttgcacgcgggaagagcataggacgc
ctcggggtccttcaccctaatgtcatcaaccactttgagctcaccatgccatgctccgcc
ctggacatcgacatcgagcccttcctgtga
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