Salvelinus fontinalis (brook trout): 129822420
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Entry
129822420 CDS
T11136
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129822420 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129822420 (dhx36)
03012 Translation factors [BR:
sfon03012
]
129822420 (dhx36)
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129822420 (dhx36)
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129822420 (dhx36)
Translation factors [BR:
sfon03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129822420 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129822420
NCBI-ProteinID:
XP_055736673
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Position
24:complement(39675502..39735962)
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AA seq
1066 aa
AA seq
DB search
MSYGGYGGRGGRRGGRRGGRGFGRDGSRERWDRQAGSSGGGHPRSTESESREDRGERGGR
GGGPNRPPPHLKGREIGLWYAKWGGLKRKENERKSRAVVQMDESREQHITNLLNTVQRGP
TCPGPAREAHPSTSEHWRSGPSGLDRGSHCYFDGDEPSQDVLKIDLKQEKKKEDEERPVQ
NTPLTSQRYLPQDVLKAEPQEEREEKERRGKDKDLEYLFQEVVRENALDQQLKRDLERKK
ADSKYLDMLKFREKLPSFGKKEELVELIRSSQVLVVSGETGCGKTTQVTQFILDDYIERG
MGSVCRVVCTQPRRISAISVAERVAAERAESVGDGNSCGYQIRLQSRLPRKQGSVLYCTT
GIILQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRQDLKVILMSATLNAE
KFSKYFNNCPMIHIPGMTFPVQEFLLEDVLEMIRYRPQKKEQRPRWKRGFMQGQNSRPEK
DQKEAEYKESWPCYARTLRDKYSDRTIDVLEMMDDDDKIDLELIVQLIRHIVLSQEEGAI
LVFLPGWDNISGLNDLLMAQQMFKSDGFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIAT
NIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRRGRAGRVCPGKC
YHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGPIAKFLMKALDPPTEEAVTLAI
THLMDLNALDRSEALTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPF
FIPMGKEKIADFRRRTLSRDSKSDHLTIIYAFTGWEEAKRRGYKFEREFCWDNFLSANTL
QMLHSMKGQFAEHLLGAGFISSKNHKDPDSNINSENEKLIKAVIVAGLYPKVAMIKPSGS
KKRPVRVYTKTDGKVCIHPKSVNAEETQFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLF
FGGDVTIQMDQDQETIAVDEWIVFQSHGRIAHLVKNLKKELDSLLEEKIRSPAPVDWSNR
QSKDCAVITAIIDLITTQERPNVNARNTAPRGRHQYYNNDDGGDQY
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggaggttatgggggcagaggcggccgacgaggtggccgaagaggaggtcga
ggattcggacgggatggaagccgggagaggtgggaccgccaagctgggtcgagtggtggt
ggacacccgcggagcaccgaatcggagtcgagggaggaccggggagaacgaggagggcga
ggtgggggaccaaaccgtccacccccgcatctaaagggccgggagatcggactgtggtac
gccaaatggggaggcttgaagaggaaagaaaatgagagaaaatcgcgggcagtggttcag
atggatgagtccagggaacagcatatcactaatctgctgaacactgtccagagaggaccg
acatgcccgggcccagccagggaggcccacccctccacatctgagcactggcgttccggc
ccgtcaggattggacagaggcagccactgttacttcgatggtgatgagccctctcaggat
gtcctgaaaattgatctcaagcaagagaagaagaaggaggatgaggagaggccagtacag
aacactccacttacatcacaacgttacctcccacaggatgtccttaaagctgaaccccaa
gaagagagggaggagaaggagaggagagggaaggataaagacctggagtacttgtttcag
gaggtggtcagggagaatgccctggaccagcagttaaagagagatctagagaggaagaag
gcagactctaaatacctagacatgctgaaattcagggaaaagcttccatcctttggaaag
aaagaggagttggtggagttgatcaggtccagccaggtgctggtggtcagtggagagaca
gggtgtggtaaaaccacccaggtgactcagttcatcctggatgactacatagagaggggc
atgggttcagtctgcagggtggtctgcacccagccacgtcgcatcagtgccatatctgta
gcggagcgggtggctgcggagagggctgagagtgtgggggacgggaactcatgtggttat
cagatccgcctgcagagtcggttaccacggaaacagggctcggtgctgtattgtacaacg
ggtattattctacagtggctccgctcatcccctctgttgtccaccatcagccacctggtt
ttggatgaaattcatgagaggaaccttcactctgatgttctgctcatcattgttaaagac
ctgctccgagtccgacaggacctcaaggtcatcctcatgagtgccacgctcaacgctgag
aagttctccaaatactttaataactgtcctatgatccacatcccagggatgaccttccca
gtgcaagagttcctactggaggatgtgttggagatgatcaggtatcgtccccagaagaag
gagcagaggcccaggtggaagagaggtttcatgcagggtcagaactccagaccggagaag
gaccagaaagaggccgagtacaaggagagctggccctgctacgcccgcacactacgagac
aagtactctgacagaaccatagatgtgttggagatgatggacgatgatgataagattgac
cttgagctcatcgtgcagctgatcagacatatcgtgctaagccaggaagaaggagccatc
ttggtgttcctgccaggttgggacaacatcagtggcctcaacgacctcctcatggctcag
cagatgttcaaatcagatgggtttgtgatcattcctctgcactccctgatgcctactgtc
acccagacctcggtgttcaaaaggccccctccaggagtcaggaagattgtcattgccacc
aatatcgctgagaccagtattaccatagatgatgtggtgtttgtgatagacgggggaaag
attaaggagactcactttgacactcagaacaacatcagcactatgactgcagagtgggtc
agcctggccaatgccaaacagagaagaggacgcgccggcagggtgtgtccagggaagtgt
tatcacctgtataatggcctgagggccagtcttctggatgcctaccagctacctgagatc
atgcgcacgccactggaggaactgtgtctgcagatcaagatcctcaagctgggtccaata
gcaaagttcctgatgaaagctctggatcctcccacagaggaggctgtcactctggccatc
acacacctgatggacctcaacgctctggaccgctcagaggctctgaccccgttagggttc
cacctggccaggctgcctgtagagcctcacatcggaaagctgatcctgtttggagctctg
ctgggctgtctggaccctgtcctcactatcgccgcctctctcagcttcaaggaccccttc
ttcataccaatgggtaaggagaagattgcagactttaggagaagaactctgtccagagac
tcaaagagtgaccacctcaccatcatctatgccttcacaggctgggaggaagctaagcga
cgcggctacaagtttgaacgagagttctgctgggacaacttcctgtcagccaatacactc
cagatgctgcacagcatgaagggtcagtttgctgagcacctgctgggggctggcttcatc
agcagcaagaaccacaaagaccccgactctaacatcaactcagagaatgagaagctgatc
aaggcagtgatagtggcaggtctctaccccaaagtggccatgatcaaacccagcgggagc
aagaagagaccggtgagggtgtatactaaaactgatgggaaggtgtgtattcaccccaag
tcagtgaatgctgaggagacccagtttaactacacatggctcatctatcacctcaagatg
aggaccagcagtatcttcctgtacgactgtactgaggtgtctccgttctccctgctgttc
tttggaggtgacgtcactatccagatggatcaggaccaggagaccatcgctgtggatgag
tggatcgtcttccagtcccacggacgcatcgctcacctcgtcaagaatctgaagaaggag
ctggactctctattggaagagaagatccgaagccccgcccctgtggactggagcaaccgc
caatccaaagactgtgctgtcatcacagccatcatagacctcatcaccacccaggagagg
cccaacgttaacgcgaggaacactgcccctagaggacgtcaccagtattacaacaacgat
gatggtggtgaccagtactag
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