Salvelinus fontinalis (brook trout): 129822586
Help
Entry
129822586 CDS
T11136
Name
(RefSeq) rab-interacting lysosomal protein-like isoform X1
KO
K13883
Rab-interacting lysosomal protein
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04145
Phagosome
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129822586
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129822586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129822586
Membrane trafficking [BR:
sfon04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129822586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH1
RILP
ATG16
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
129822586
NCBI-ProteinID:
XP_055736906
LinkDB
All DBs
Position
24:complement(27299275..27318680)
Genome browser
AA seq
441 aa
AA seq
DB search
MNTCAIMEKDCGRNDQKQDVKTEVCFERTCSALTVDDVYEIAKLIGSEVETLIDGYGKES
ATGLVPKIVKVLELLESFASRNHAHKSKEEDLLKAFETLNVQKQKKTRNVKECEQSKNEI
QREVQEEVEKQKRRCEELQAQVLHLQMENQELQSCLRGNHVQEDRVQRQEREVMLKLKEV
VDKQRDELRAKAQQIASVSKEVEALQEQLERFMKMNGELRHKQSIVTAQVKNAVERKADM
EADLREKQKAIERLTTQLEKANAAAGTANPCKTEVDLTDKLVIDLKDPNRPCFTKQEVRE
MLTERNELKANLFLVQEELSYYQREILNDERCPGFLLDAVRSAIKKQKTVIKAKMLGMPE
DECSSDEEKGPLFERRAETETETDSTDSKPQESRIRNLFGFLTRSGSNHSSRSPSENNAA
SSWEIIDDTDNTAETEPRQSP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaacacttgtgcaataatggagaaggattgcggtagaaacgatcaaaagcaagacgtc
aagacagaggtgtgttttgaaaggacatgttcagcactaactgtggacgatgtatacgaa
atagctaaattgattggctcggaagtggaaacacttattgacggctacggtaaagagagc
gccacaggactggtgcctaaaattgtcaaagttctagaacttttggagagcttcgcatcg
cggaaccatgcacacaagtcaaaagaagaagacctacttaaagcgttcgaaacacttaat
gtacagaaacagaagaagacgagaaatgtgaaagaatgcgaacaaagcaagaacgaaata
caacgggaggtgcaggaggaggtggagaagcagaagaggaggtgcgaggagctgcaggcc
caggtattgcatctacagatggagaatcaggagttacagagctgcctgaggggcaaccat
gtccaggaagaccgtgtccaacggcaggagcgggaggtgatgctgaaactgaaggaggtg
gttgacaagcagagagatgagttgagggccaaagcacagcagatagccagcgtgtctaaa
gaggtggaggcgctgcaggagcagttggagcgcttcatgaagatgaatggggagctgaga
cacaagcagagcatcgttacggcccaggtgaagaatgctgtggagaggaaggctgacatg
gaggcagacctccgagagaaacagaaagcgatagaacgcctcaccacccagctggaaaag
gccaacgctgctgccggcacggccaatccgtgtaagacagaagtggacctgactgacaag
ctggtgatagacctgaaagatcccaacagaccctgtttcaccaagcaggaggtcagagag
atgctgacagagaggaacgagctcaaagccaacttgttcctggtgcaggaggaactctcc
tactaccagagggagatcctgaatgatgagcgatgtccaggattcttgctggacgctgta
cgttctgccataaagaaacagaaaactgtcatcaaggccaagatgttgggcatgccagag
gacgaatgcagcagtgatgaggagaaaggacccctgtttgagaggagagcagagacagaa
accgagacagatagcactgacagcaaaccacaagagtctcgcatcaggaacctctttggc
ttcctgacgcgctccggcagcaaccacagcagccgtagtcccagtgaaaacaacgctgct
tcttcctgggaaatcatcgacgacactgacaacactgcggagacagaaccccgacagtca
ccataa
DBGET
integrated database retrieval system
