Salvelinus fontinalis (brook trout): 129822730
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Entry
129822730 CDS
T11136
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129822730
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
LRR_14
PDZ_6
LRR_4
PDZ_2
LRR_9
LRR_LRWD1
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
129822730
NCBI-ProteinID:
XP_055737047
LinkDB
All DBs
Position
25:complement(1330135..1457355)
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AA seq
1928 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSKL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEHLD
LGSNELDVLPDTLGALPNLRELWLDRNQLSSLPLELGNLQRLVCLDVSENRLEELPSELS
GLLALTDLLLTHNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDAIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGDVPDELGGCASLNVLSLRDNRVAKLPAELADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDKSTGEKVLTCYLLPQQP
SPSLENLLQNGVDDSWIDSNLNRVSVIQFQEETTKQDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEEKRNEAHISSPDGEPESPGTEEKRLSNLSNQSHDSAASNSTASANSHEERRC
MITTARESLVSGRGEEEELDEMEVEYVEPTVHFAEEPVYRGGIEDGEDAEGGDGVPCSDL
EEQRPQFPTEKQRLIRKDTPHYKKNFKITKLPKPEAVAALLQGFSPDAHLAQHPASHHPD
PEEEEEEEEEEEEEECMVTPQRHNRIEEPEQEVRSLLHVNSSLQPVKGVSFDQVNNLLIE
PARIEEEEHTLTILRQTGGLGISIAGGQGSTPYKGDDEGIFISRVSEEGPAAQAGVKVGD
KLLEVNGVVLQGAEHHTAVEALRSSGSAVSMSVLREHMVEPENAITTTPLRPEDDYFPRE
RRASGLPFCIEAGSPAGLRHRLSTCLARNDKGLGFSIAGGKGSTAYRTGDMGIYISRIAE
GGAAHRDCTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEPGTAGGS
PGLSRARAHSPPPPEPSDSPDQEEGNDDSSLLPHGNHLSQPLEDEYPIEEVALVKAGGPL
GLSIVGGSDHASHPFGINEPGVFISKVISHGLACQSGLRVGDRILEVNTTDLRHATHQEA
VRALLSNKQEIRMLVRRDPSPPGMEEIVIQKQPGEKLGISIRGGAKGHAGNPFDATDEGI
FISKVSSSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLVMLVCDGFDP
GNAAAIEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMVRETSQWER
EEMEKVERMRLEREEDTRLLEEETENLGTGPLKLDYRTLAALPTTALQKVNRAPSTEPPR
TDSPMRDAPYSPSTQPASIHFTPTALPAKEDISPLSPYETRPGAIQPLSRGGGPITSPAT
PDGHSSPNPFQHGPSPINSQTFLQPRAPSPDTIDEFPLNPKQAYKAFAAVPHSLAVLEPP
PQDLFGQRSNVQPNQPSPSPELNNEVFEDEVEGDGGMGMGQAAPVSPRPFLSSDCRDYMS
LAAVPRLSRASMDMVVKTPSPGGRDNQEQRSFRDRQKYFEIDTKQQMPDTKPKGRVSLVG
ADDLKKMREEEERRFEQRAREYLMDEDDEEEDDLVKQMGVLKATGKVLLDGVEYKVEPVA
TPRRHCNTPPSYSTTPPSYCGSSGPSSVDGKGDYQRNSLEESFRLEQQRPNSMTGLIPVY
PGESGAPIRTAKAERRQQERLRMQSPELAPAGDKDLSPSEKRALEAEKRAMWRAARPYGL
EEDVRQYEQDLAKRLYQSRVRASQGTAPPPQSQIAAASSAASQLRMKSLEQDALKAQMVI
AKSREGKKRGTLDQLAESPSTAPTPSPTPLEDFSPQGVTSPGRLSLSEKKFDYRQFAAIP
SSKPVYDIQSPDVVDDIQFIDDGSSNPVHAADPGTEVPTATSALEMALYSSKRKLRQGCR
SLETAVPT
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgttgtaaccgccacgtcgagtcggtggacaagcga
cattgtaatttgcaaaatgtccccgacgagatatttcgctacagccgcagtctggaggag
cttctcctcgacgctaaccaactccgagaactacccaagcccttcttcagactcctgaac
ctgcggaaactgggtctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagcttgacatttccaggaacgacattcctgagatccccgagagc
attaagttctgcaaggcattggagattgcagacttcagtgggaaccccctctccaagttg
cctgatggtttcactcagctcagagggctcgcccacctggcccttaacgacgtgtcattg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcactctctttcctggtgaaactggagcatctggat
ctgggcagcaatgaactggatgtgttgccggacacacttggtgctctccctaacctacgg
gagctgtggttggaccgcaaccagctctcctctttgccactagagctggggaacctgcag
agactagtgtgtctagacgtgtcagagaaccgactggaggagttgccttcggagctcagc
ggtctgctggccctcactgacctgctgctcacacacaacctcctggaggtggtgcccgac
agcataggctctctgaagcagctgtccatcctgaaagtggaccagaaccgactgacccac
ctgagtgacgccataggagagtgtgagaacctgacggaactcgtactgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagttgaagaagctgaccaacctgaatgtggac
cgcaaccggctgggcgacgtgcctgatgagctgggtggttgtgccagcctcaacgtgctc
tccctcagagacaaccgcgtggcgaaattgcccgctgagctggctgacgccaccgagctt
catgttctggacgtggcggggaacaggttacagaacctgccgtttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccaatcacagcccatgctcaagttccagacg
gaggacgacaagagcaccggggagaaggtgctcacctgctacctgttgccccagcagccc
tcccccagcctggagaacctgctgcagaacggtgtggacgacagctggatagacagcaac
ctgaaccgggtgtcagttatccagttccaggaggagactaccaagcaggatgaggacgat
gaggcggctgcagagcgcaggggtctccagcgccgggcgacgccccaccccagtgagctg
aaggtcatgaagaaggtgattgaggagaagaggaacgaggcccacatatccagtcctgat
ggagagccagagtctcctggtactgaggagaaacgactgagcaatctgtccaatcagagc
cacgactctgcggcgtccaacagcacagcctctgccaactctcacgaggagagacggtgc
atgattaccacagcgagggagagcctagtgagtgggcgtggtgaggaggaggagctagat
gagatggaggtggagtatgtagagcccacggtgcactttgcagaggagcccgtataccgg
ggtgggattgaggacggtgaggatgcggagggtggggacggggtcccatgcagcgaccta
gaggaacagaggccccagttccctacggagaagcagcgtctgatcaggaaggacacgccg
cactacaagaagaacttcaagatcaccaagctgccaaaacccgaggcggtggccgcgtta
ctgcagggcttcagccccgacgctcacctggcccaacaccccgcctcgcaccaccctgac
cccgaggaggaggaggaggaggaggaggaggaggaggaggaggagtgtatggttactcca
cagcgccacaaccgaatagaagagccagagcaggaggttaggagtctgcttcatgtcaac
tcttccctgcagccggtcaagggggtgtcatttgatcaagtcaataatctcctgattgag
cctgctcgaattgaggaggaagagcacaccctgaccattctacggcaaactgggggcctg
ggcatcagcatagccggaggacagggatccacaccctacaagggggatgatgagggaatt
ttcatctccagggtgtctgaagagggccctgcagcgcaggctggggtcaaagtgggagac
aaactcctagaggtgaatggtgtggttctccagggggcagagcaccacacggcggtagag
gccctgcgcagctcgggctccgccgtctccatgagcgtcctccgggagcacatggtggag
ccggagaacgccatcaccaccacaccgctgaggcccgaggacgactacttcccccgggag
agacgggccagtggccttcccttctgcattgaggcaggctcccccgcaggcctccgacac
aggctgtctacctgcctggcccgcaacgacaagggtctgggcttcagcattgctgggggc
aaaggctccacagcctaccgcacaggggacatggggatctacatctcgcggatcgcagag
ggaggggcagcacacagagactgcacactccgagtaggggacagggtcatcaccatcaat
ggtgtagacatgacagaggccaggcatgaccaggcagtagcgctgcttaccggcacctct
cccacaattgctctcctggtggagcgtgaccaggccgagccgggcaccgcagggggctcc
ccgggcctgtcccgggcccgcgcccactcccccccacctccagagccctctgactcaccc
gaccaggaagagggcaatgacgactcgagcctcttgccacatgggaaccacctgagccag
ccactggaggacgaataccccatcgaggaagtggcgttggtgaaagcgggcggccccctg
ggactgagcatcgtgggaggcagtgatcacgccagtcacccgttcggcatcaacgagcct
ggcgtcttcatctctaaggtgatctcccatggcttggcgtgtcagagtgggctgcgggtg
ggggacaggatactggaggtgaacaccaccgacctgcgccacgccacccaccaggaggct
gttagagccctgctctccaacaagcaggagatccgcatgctggtgcgcagggacccctcg
cctcccgggatggaggagatagtgatccagaagcagcctggagaaaagctgggtataagc
atccgcggcggtgccaagggccacgctggcaaccccttcgacgccaccgatgagggcatt
ttcatatccaaggtgagctccagcggtgcggcggccagggatggccgtctgcttgtgggc
atgcggatcttggaggtgagtaaccacagcctgctgggcatgacccacacggaggctgta
cgcgtgctccgtgccgtgggagacaccctggtcatgctggtgtgtgacggcttcgaccct
ggcaacgctgccgctatagaggcgtcaccgggcatcatcgccaacccgtttgcagcaggc
atcgtgcgtaagaacagcatggagagcatctcctctatcgaccgagacctgagtcccgag
gagatggacatcctacagaaggaggtggagatggtgcgagagacgtcccagtgggagaga
gaagagatggagaaggtggagcgcatgcgcttggagcgtgaggaggatactcgcctgcta
gaagaggagaccgagaacctgggcactgggcctctgaaactggactaccggacgctggcc
gcactgcccaccaccgctctgcagaaagtcaacagggcgccctccactgagccccccagg
acagacagtcccatgagagacgccccctactcacctagcacacaaccggcaagcattcat
ttcacccctactgcactgcctgccaaggaggatatctcaccactgagtccctatgagaca
aggccaggtgccatccagcccctctcccgtggtggcgggccgatcacctcgccagccact
ccggacgggcacagcagtcccaatcccttccagcatggcccctcccccatcaactctcag
acctttctgcagcctcgtgccccctcccccgacacgatcgatgagttccccctgaacccc
aagcaggcatacaaggcattcgccgccgtgcctcactcgctggccgtgctggagcctccc
ccgcaggatctgtttggccagaggagcaacgtccaacccaatcagccttccccttctcca
gagctgaacaacgaggtgtttgaggatgaggtagagggggacgggggaatgggtatgggt
caggcagcccccgtctctccccgacccttcctctcctctgactgtcgggactatatgagt
ctggcagcagtgccacgcctctccagagcctccatggacatggttgtaaagactccatca
cctgggggcagagacaaccaggagcagcgctccttcagggacagacagaagtactttgaa
atcgacacgaagcagcagatgcccgacaccaagcccaaaggccgcgtgtccctggttgga
gcagacgacctgaagaagatgagggaggaggaagagaggagattcgagcagcgggcacgg
gagtacctgatggatgaagatgacgaggaggaggatgacctggtgaagcagatgggagtg
ttgaaggccacgggcaaagtgctgctggacggggtggagtacaaggtggagcctgtagcc
accccccgcaggcactgtaacacgccccccagctacagcaccacaccccctagctactgt
ggcagctcagggccctcgtcagtggatggtaaaggagactaccagaggaattccttagag
gagagcttcaggctggagcagcagaggcccaactccatgactggtctgatcccagtgtac
cctggagagtcgggggctcccatccggacggccaaggcagaacggaggcaacaggagcgg
ctgaggatgcagagtccagagctggccccagccggagacaaggacctctccccttccgag
aaacgggctttggaagccgagaagagagccatgtggagagcagcaaggccctatggccta
gaggaggatgttaggcagtatgagcaggacctggctaagaggctctaccagtcacgagtg
agggcgtctcagggcaccgcgccaccccctcagtcccaaatcgccgccgcctcttccgct
gcctcccagctcaggatgaagtctctggagcaggatgctttgaaggctcagatggtcatc
gctaagtcccgggagggaaagaagcgtggcacactggaccagctggccgagtcgccctcg
accgcccccacgccatcccccacccctctggaagatttcagtccacaaggagtgacgtca
ccaggcagactgtccctgtcggaaaagaagtttgactaccgacagtttgctgccattcct
tcttccaaacccgtatacgacatccagtcccctgacgtggtcgatgacattcagtttatt
gacgatggctccagtaacccagtgcatgctgcggatcccgggactgaggtgcccactgcc
acctcggcgctggagatggccctctacagcagcaagcgcaaactgaggcagggctgccgc
agcctggagaccgccgtgcccacataa
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