Salvelinus fontinalis (brook trout): 129822738
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Entry
129822738 CDS
T11136
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129822738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129822738
03036 Chromosome and associated proteins [BR:
sfon03036
]
129822738
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129822738
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129822738
PBAF complex
129822738
GBAF(ncBAF) complex
129822738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129822738
NCBI-ProteinID:
XP_055737067
LinkDB
All DBs
Position
25:complement(1821035..1880612)
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AA seq
561 aa
AA seq
DB search
MVEQLLSLIDGAGLAWDAACSKRRGRKTAQVANRRPGMPSGARMPHQGAPMGPPGPPYSG
SPTVRPGLPTPVMEPSRKRPAPSQQNQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQ
SDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKR
PMKQKRKLRLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLV
IELDKDLYGPDNHLVELLTSKAKRFSLPKDNILKGSRARLLVESWHRTPTTQETDGFQVK
RPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHD
KEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDID
VEVEDPLKSQMSSFLLSTANQQEIASLDNKVGQPHRKDSQSQLPKMTLKIHETIESINQL
KIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAAFYHEPWSQEAVSRY
FYCKIQQRRQELEQALAVRNT
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagcagctgctctccttgattgacggggcaggcttggcgtgggacgcggcatgc
agcaagaggagagggagaaagacggctcaagtagcaaacagacgtcctggaatgccatct
ggagctaggatgccccaccagggtgcccccatgggcccccccggcccaccgtacagtggg
agccctacggtgcggcccggcctgcccaccccggtcatggagcccagccgcaagagacct
gccccctcccagcagaaccagcagcagcagaacgtacagaaccgggccagaaagaagcca
gtgggattccctggagccaatgagatgccagcgaggcagatggacatgagagatgcccaa
tcagatccaacgctcggatcaaacgccaagagaaggaaaatggcagacaagattcttcca
cagaggatccgtgaactggtccctgagtcacaggcttacatggacctgctggccttcgaa
cgtaaactggaccagaccatcatgcgtaaacgggtggacatccaggaagccctgaagaga
cccatgaagcaaaagcgtaaactgaggctgtacatctccaacaccttcaaccctgccaag
cccgacgctgacgactcggatggcagtattgcatcatgggagctgcgggttgaggggaag
ctgctggatgatcctgggaagctgaagaggaagttctcctctttcttcaagagcctggtg
atcgagctggacaaagacctatacggtcctgacaaccaccttgtagagctgctgaccagt
aaagcgaagcgattcagccttccaaaagacaacatactcaaagggtcgagagcaaggctg
ctcgttgaaagttggcaccgcactcccaccacccaggagacggacggcttccaggtgaag
cggccaggggacgtgagcgtgcgctgcacactgctgctaatgctggactaccagcccccc
cagtttaaactggaccctcgcctggcccggctgctgggtatccacacccagacccgctcc
tgtatcatccaggccctgtggcagtatgtcaagaccaacaagctgcaggactcccatgac
aaggagtacatcaactgtgacaagtactttcagcagatctttgactgcccgaggctcaag
ttctcggagatcccccagcgtctcaccaacctcctcctgccccctgaccccatcgtcatc
aaccacgtcatcagtgtggaccctaacgaccagaagaagacggcatgctatgacattgac
gtggaggtggaggaccccctgaagagccagatgagcagcttcctgctctccaccgccaac
cagcaggagatcgcctcattggacaacaaggtgggacaaccacacaggaaggatagccaa
tcacaattacccaagatgactttaaagatccatgagaccattgagtccatcaaccagctg
aagatccagagggactttatgctcagcttctccagggatcctaagggctacatccaggac
tggctcaagtcccaaagcagagacctgaagctgatgacagacgtggtggggaacccagag
gaggagaggagggcggcgttttaccacgagccctggtcccaggaggccgtcagtcgctac
ttctactgcaagatccagcagaggagacaggagctggagcaggccttggccgtgaggaac
acctaa
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integrated database retrieval system
