Salvelinus fontinalis (brook trout): 129822823
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Entry
129822823 CDS
T11136
Name
(RefSeq) rab11 family-interacting protein 1-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129822823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129822823
Membrane trafficking [BR:
sfon04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
129822823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
MIC19_MIC25
DUF4635
Motif
Other DBs
NCBI-GeneID:
129822823
NCBI-ProteinID:
XP_055737234
LinkDB
All DBs
Position
2:62368888..62402273
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AA seq
1539 aa
AA seq
DB search
MMSLIELNDDQRWVPTHVNVTVLRARGLRTKGKHGSRYVYTIIQVGKEKYTTGLVEKATV
PEWNEECCFELLPGILEAGGRSAFPSGSGDLVLTVMHRVLIGLDVFLGQAIVPLDKIFQD
GMCPRDEWLKLNSKASRKEKERGEIQVTVQFTRNNMTASMFDLTMKDKPRSTFGKLKDRV
TGRKRGDVESSSAIVPGRFAALSSSLGQPFGEGGGGRGGEDPGEVEVAEEKRSKVKDFFL
GKGKLRRSSDTRSCSSLASESSVSSTTSESHCPPSLGLGLLVDPPSSPIYSSKVKDTHHG
DTDLAKKVLTTTQSSPKILTHKRAFSDEASRITTTAIPRPCPAVESLKGQGMALSQSSLC
INGSHVYGSEPVGPKGSSTLPSKLVLLEKCSPLSRSLQNLTKRSEDKGSAGEGRRWSFDK
VKKDEKDEEKEAEPPVSQFQSARVGGRPVQAAAPMLSSTTTVDSADKGKKLRKTLFSGGR
SDSLPAKSELSQGSPPPEGRLRGWFGSSDSQNKPRLEVSPKVESESDTPPPLPPRSPIPL
QCSSPSASFTGHASPDSAHPTNPFTPSLTPDPISPFNPFLPRMQCNPFFEEEGQRSPPLA
TCSPVTPLCHSTALPCVPSPTHDPVVQIEMAAIWRDRPRPVARQTSLPALLPTAATASPP
NPFTSRSISESGGGEWDESFDAFASSRLNSPKGSATNHPSIATSRQAQVRSTPPYESYTI
PPIEEMRMSEEEEPPPLPPRRPIIRTLVNERPSDSWLHRGQELAVQKEACLLSQTGAASL
QHTREWGHKRHTPSPHLYPSPGKDLVSSDLLDFHTVHSQHYANISPESPSPFKSEDEFKK
FDYEPLRDEDDKIRFTEQNLWPDATDSIISLASEDTTDASPTVRKYAIVKNTSHSELKDL
PLPVMLLNSEMTVADLLNKSSPKHSKSGLKTLDIASTTPDPTTGLFSIHTDKPKSRNNNY
ESPPLTLEDLNKNKSNSDFCFIDSASDASPSPSDMMTVHTLKSLGEEKCQTPQDTPIALS
HEQMMLYAEDMLIFQKTSTIDVNSAVKVNLPEVSSLCQDNCQDGGCELNTSRRDSASDMK
SISIFTPDSLNIERETVELKDTQSPMDRNGNMTKSKIDRSKLDPSCHVRSFPVSHQMEMQ
QEVVRNKQEVSQPLAKQTNPVNESSPRGTSSHRSLKGMIRELHGNSGANSPGKGLGESPL
HRSPSPGQIISESIEGPFSYQPTKSPFSSPLSPNRETALNVATLFVSLQKINTNSSTQSI
PKGNCLSEHSSSKYAGTISFEDLHAKVAPNVRSPMSARLRPGITVHASNPCASIPSSATP
SLATETNSQAKLPPTPVPSSIHHPPTVRPSTGASATLAVAPYTSSSFSSSSSYTSAQPLV
DARHTLLPEETQPASNLPRQESSPHPVKPLTTTASQGEKKEGRSVLEKLKSSIHPGRSAQ
QTLAVAETEKKIEESLADSSAQYEQLTNMELISLLLQQEMDMEKQQVASDQQASMLEKHE
AELKKIKAQVRDLEDYIDKLLVQIMEQTPTLLQVRSRHK
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacttatagagttgaacgatgaccagagatgggtgcctacacatgtgaatgta
actgtccttcgtgcaaggggtttgcggacgaagggcaagcacgggagccgttatgtttac
actatcattcaggttgggaaggagaaatacaccaccggtttggtcgaaaaggcgactgtg
ccagagtggaatgaggaatgttgtttcgaacttctccccggtatactggaggctgggggt
cgcagtgcatttccctcagggagcggcgacttggtcctcacggtcatgcaccgggtgctt
atcggacttgacgtgtttcttggtcaagcaatcgtccctctggataaaatatttcaagat
ggaatgtgtcccagagatgaatggctcaaactcaactccaaggccagccggaaggagaag
gagcgtggcgagatacaggtaacggtccagttcacgcgcaacaacatgacggccagcatg
ttcgaccttaccatgaaggacaagccgcgctctaccttcggcaaactcaaggaccgcgtg
acagggaggaagaggggcgacgtggagtcctcctcggctattgtgccgggacgcttcgcc
gccctgtcgagttccctggggcagccattcggggaggggggcggagggagagggggagag
gaccccggggaggtagaggtagccgaggagaagcggagcaaggtgaaggattttttcctg
ggtaagggaaagctgcggaggtcctctgacacgaggtcgtgttcgtcgctggcctcagaa
agcagcgtgtcatccacaaccagtgagagccactgccccccttctctgggtctaggcctc
ctggtggacccccccagctcccccatctacagcagcaaggtcaaagacacccaccatgga
gatacagacctagctaaaaaagtgcttaccaccacacagtcttccccaaagatactgact
cacaagcgagccttcagcgacgaggcgagtaggatcaccacgactgccattccccggccc
tgtcctgctgtggagtccctcaagggtcaaggtatggctctctcccaatcctctctgtgc
atcaatggaagccacgtctatggatctgaaccggtgggtcccaagggctcaagcaccctt
ccatccaagctggtcctgctcgagaagtgctcccctctctctcgttcgctgcagaacctc
acaaagcggagcgaggacaagggttccgcaggcgagggccggcgctggtccttcgacaag
gtaaagaaggacgagaaggatgaggagaaggaggccgaacctccagtctcccagtttcaa
agtgctcgggtggggggtcggccggtgcaggcagcagccccgatgctgtcttctactacc
acggtggactcagcagacaaagggaagaagctcagaaaaacgttattctccggagggagg
agtgattctctacctgccaagtccgagctgagccagggttctcctccccctgaggggaga
ctgcgaggctggtttggctccagtgactcccagaacaagccaaggctggaagtttctcct
aaggtagaaagcgaatcagacacccctcctcctctcccccctcgctcccccattcccctc
cagtgctcgtctccctctgcttctttcactggccatgcctcgcccgacagtgcccatcca
actaaccccttcactccctctctgacccctgaccccatctctcccttcaaccccttcctc
ccgcgtatgcagtgtaaccccttttttgaggaagagggccagaggtccccccctcttgct
acctgctcccctgtcacacccctctgtcattccacagctttgccttgcgtccccagtccc
acccacgatcccgtcgtgcaaattgaaatggccgccatatggcgagaccggcccaggcct
gtagccaggcagacgtccctccctgccttacttccgacagcagcgacggctagccccccc
aatccgtttacgtctcgctccatatcagagagtgggggaggagaatgggatgagtccttt
gacgcctttgcctccagcaggctgaattcaccaaagggctctgctaccaatcacccttca
atagcaacctcaaggcaagcccaagtaagaagcactcctccatatgagagttacactatt
ccacccattgaggagatgaggatgagtgaagaagaagagcctccaccattgccgccacgg
aggcccataatacggacgctggtgaacgagagaccctctgacagctggttgcacaggggt
caggaactggctgtgcagaaagaggcctgtctcctgtcacaaacaggcgcagcttcccta
cagcacacaagagaatgggggcacaagagacacacaccaagtccccacctgtacccaagc
ccaggcaaagaccttgtcagcagtgacctgttggactttcataccgtacactcacaacat
tatgccaacatatctccagagtctccatctccattcaagtctgaagatgagttcaagaag
tttgactatgaaccattacgagatgaagatgataaaattagatttactgagcagaattta
tggccagatgcaacagattcaataatatcgttggcctcagaggatacaacggacgccagt
cccactgtaagaaaatatgctattgtaaagaacacttcacattctgaactcaaagactta
cctctgccagtaatgcttcttaatagtgaaatgactgtagccgatctactgaataagtct
tccccaaaacactctaaatcaggtcttaagacgctggacattgcttcaactacaccagac
ccaacaacgggcttgttttcaattcacacagataagcccaagtccagaaacaacaattat
gaatcacctccgctaaccttagaagatcttaataaaaacaaaagtaactcagatttttgt
tttattgactctgcttctgatgcttccccatctccatctgacatgatgacagtgcatacc
ctcaaaagtttaggtgaggaaaaatgccaaactccacaagatactcccatagcattatct
catgagcagatgatgctatatgcagaagatatgttaatttttcagaagactagtacaata
gacgtcaactctgctgtaaaagtgaatttaccagaagtctcctcgctttgtcaagacaat
tgtcaagatggaggttgtgaattgaatacatcacgcagagattctgcaagcgatatgaag
agcattagcatttttacgcctgacagtcttaacatagaaagagagactgtagaattaaaa
gacactcaatctccaatggatagaaatggcaacatgacaaaatcaaagatagaccgttca
aaactagacccttcatgtcatgttagatcttttccagtttcgcaccagatggaaatgcaa
caggaagttgtacgcaataaacaggaagtgagtcagcctctggccaaacaaaccaatcct
gtcaatgagtcttcaccaaggggcactagttctcacagaagtctcaagggaatgatacga
gagctccacggcaacagtggtgcaaatagccctggcaaaggattaggtgagagccctctt
caccgatcaccgtctcctggacaaataatctcagagagcattgaaggaccgttctcatat
caacccaccaaatctcctttttcctcacctttgtcaccgaatagagagacagcgctcaat
gtagctacattatttgtgtccttgcaaaaaataaacacaaatagttccactcagtcaatt
ccaaaaggaaactgcttatcggaacattcctcgtccaaatatgctgggacgatcagcttt
gaagacctccacgccaaagtagccccgaacgtgagaagccccatgagtgccaggttaagg
cctggcatcacagtgcatgcttccaacccctgtgcttccatcccctcctctgctaccccc
tccctggcaactgaaactaatagccaggctaagctgccccccacccctgtcccctcctcc
atacatcaccccccgaccgtgaggcccagtaccggagccagtgccaccttggctgtggcc
ccctacacctcttcctccttctcctcctcttcctcctacacctctgcccagcccttggtc
gatgcacggcacacacttttgcctgaggagacacagccagctagcaacctgccccgacag
gagagcagcccccacccagtgaagcccttgaccacaacagccagtcagggggagaagaaa
gagggccggtcagttctggagaagctcaagtcttccatccatccaggccgctctgcccag
cagacactggccgtggctgagactgagaagaagattgaggaatcgttagcagacagctct
gcccagtacgagcagctgacaaacatggagctgatttcccttctgctgcagcaggagatg
gatatggagaagcagcaggtggcctctgaccagcaggcgtcgatgctggagaaacacgag
gcggagctgaagaagatcaaggcacaggtgcgcgacctagaggactacatcgacaagctg
ctggtgcagatcatggagcagacacccacactcctccaagtgcgctcccggcacaagtga
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integrated database retrieval system
