Salvelinus fontinalis (brook trout): 129822930
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Entry
129822930 CDS
T11136
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129822930 (trpc1)
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129822930 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
129822930
NCBI-ProteinID:
XP_055737465
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Position
25:complement(18059339..18092961)
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AA seq
805 aa
AA seq
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MVKWSLAPSSGMHISVLPYSFSVAMAALYQVTDVSSPDKFLALKDVREVKEETTLDEKLF
LLACEKGDYYMVKRLLEEKTELNINCVDVLGRDAVTISIENQNLDILKLLLEHGCQATDA
LLVAIDSEVVGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYE
ILTMLLKQDISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDP
ILRAFELSADLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHMANED
TVDKRGLMEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMST
VLSVAMLWPLLSLCYLVVPRSRVGHIIHTPFVKFIIHSASYFTFLLLINLYSLVYNEGKK
NTMGPALEMIDYLLILWIIGMVWSDVKRLWYEGLEDFLDESRNQLSFVMNSLYLSTFALK
IVAHSKFKNVEDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISVG
QMLQEFGKFLGLFLLVLISFTIGLTQLYGKDQKDPAKSPAKDCEGIFCQQQSNDAFHTFM
GTCYALFWYIFSLAHVALFVTRINYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKS
FRQIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLLTSMSKWICSHTST
GKVKRQNSLKEWRNLKRKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDL
SKFRNEMRDLLGFRTSKYAMFYPRS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggttaaatggtcgctggcgcctagtagtgggatgcacatcagtgttctgccctactcc
ttctccgtcgcaatggccgctctatatcaggtcacggacgtgtcctctccggataaattt
ctggccctgaaagacgtgagggaggtgaaggaggagactactctggatgaaaagctcttc
ctactggcctgtgagaaaggtgactactacatggtgaagagactgctggaggagaagaca
gagctcaatatcaactgtgtagacgtgctggggagagacgctgtcaccatctctatagag
aaccaaaacctggacatccttaagcttctgctggagcacggctgccaggcaacagatgct
ctgttagtggccattgactcggaggtggtgggagctgtggacatcctcctcaaccatcgc
cccaggaggtcctctaagccctccatcgctaaactgatgcagcggatccagaaccctgag
tactccaccaccatggacgtggcgccagtgatcctggcggcccataggaacaactatgag
atactgaccatgttgctgaagcaggatatctccctgcccaggcctcacgctgtgggctgc
gagtgtactctctgtaatgccaagaacaagaaggacagcctacggcactccaggtttcgt
ctggacatctacaggtgcctggccagcccgtctctgattatgctgaccgaggaggacccc
atcctcagggcctttgagctgagtgcagacctcagggagctcagcctggtcgaggtggag
ttcaggaatgactatgaagagctggctaagcagtgtaagatgtttgctaaggatctcctg
gcccaggcacgtaactccagagaactggaggtgatcctcaaccacatggccaatgaggac
acagtggacaagagaggcctgatggaggaacgcatgaacctcagccggctcaaactagct
atcaagtacaaccagaaagagtttgtggcccagtccaactgccagcagttcctcaacacc
gtctggttcggcgagacggccagctaccggcgtaaacacacgtgtttgaagatgtccacg
gtactgagcgtggcgatgctgtggccgctgctctccctgtgctacctggtggtgccgcgc
tcccgcgtgggccatatcatccacacgccctttgtcaagttcatcatacacagtgcctcc
tacttcaccttcctcctgctcatcaacctgtactctctggtgtacaacgagggcaagaag
aacaccatgggtcctgccctggagatgatcgactacctgctcatactctggatcataggg
atggtgtggtcggacgtgaagcgtctatggtacgagggcttggaggacttcctggatgag
tcgaggaatcagctgagcttcgtcatgaactctctctacctgtccacctttgccctcaag
atagtggctcacagcaagtttaagaacgtggaggacacagagaggaaaaattgggatgcc
ttccaccccatccttgtggctgaggggctgtttgccttcgctaacgtcctgagctaccta
cgactgttcttcatgtacaccaccagctcaatactgggcccactgcagatctccgttggc
cagatgctgcaggagtttggtaagttcctgggtctgttcctgctggtgctcatctctttc
accatcggcctgacgcagctctacgggaaggatcagaaggacccggccaagagtcccgcc
aaagactgtgagggcatcttctgtcagcagcagagcaacgatgccttccacacgttcatg
ggaacgtgctacgctctattctggtacatcttctctctggcccacgtggctctcttcgtg
acccggatcaactacacggaggagctgaggtcatttgtgggagccctcatcgtgggcacg
tacaacatcgtggtggtcatcgttctcaccaagctgctggtcgccatgctccacaagagc
ttcaggcagatcgctaaccacgaggataaggagtggaagtttgcccgcgccaagctgtgg
ctgagctactttgacgacaagtgtaccctgccgccgcccttcaacatcctaccctccccc
aagactgtgtgttaccttctgaccagtatgagtaaatggatctgctcccacacctccacg
gggaaggtcaagagacagaacagcctcaaggagtggaggaacctgaagcggaagcgtgat
gagaactaccagaagatcatgtgttgtctggtccatcgctacctgacgtccaccaggcag
aagatgcagagcaccgaccaggccaccgtagagaacctcaacgacctgcggcaggacctc
tccaagttccgcaacgagatgagagacctgctgggattcagaacctccaagtacgccatg
ttctacccccggagctaa
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