Salvelinus fontinalis (brook trout): 129823105
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Entry
129823105 CDS
T11136
Name
(RefSeq) ras-responsive element-binding protein 1-like isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129823105
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129823105
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_8
zf-C2H2_11
zf-C2H2_REST
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
129823105
NCBI-ProteinID:
XP_055737837
LinkDB
All DBs
Position
25:complement(31056209..31123458)
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AA seq
1837 aa
AA seq
DB search
MSRRKQPNPNKVELMESTTEDTRPGGGVSAELSAGETDHSEKQETPDCTHTQDKHTGSNG
AMEEEEEEGAAGENGENMTEEEGVDLSSINTMLSTVMNAGQLNGALEPSTPSTAISKTTL
PRPPSVNRNARRNTTEAKDFSTDFICPLCDKDCMTQHQLTMHIRQHNSDNGATDHSCSIC
GKALSSASSLDRHMLVHSGERPYKCSFCGQTFTTNGNMHRHMKIHDKDPAGVVPISPPLP
TKRRRPSAKRRSAMDENKERSEEPAKKKVLEESVLEELGSGQGDDEVLPCPICFKTFGCK
YDLEVHMDTHPDTTLRCDLCCLSFRTHRGLLRHNAGIHKQLPTDPGGRPFIQNNPSIPSG
FNDLAFIDFSCHKFPHIAQVWCETNLRRCTSKFHRFVCEACDKGFPLLSALVLHRTTIHQ
QQPSPTEGAQEPPAAQEKPATPAPQQASFLETLGLQHISQVKLQPSEDEVRQAQLDSIRV
IQVEPLASTLPQEVDSAAAGSLGGLGLVAASSLQGLSQREALSLLSLQPFPTGFLFRPGG
GTAVKPVCGEAGLMELADIQQILKVASTAPGQMGLLPSLAKAPHWGVSGQGQAAGCKHMP
PLKPKPMVAPRSSLAASTLPPLQSTQQASLGCISPSLPPPASQLLNMPQESSSSSSSSSG
SQASLEKMQMEADFMGDAHMPNDSTELQIKQEEGQAAGGKKGAGGSNRGGVKASYPCRFC
DQVFVYSGVLQAHMRFHLGILPHQCNICDYVAPDKATLIRHLRTHSGERPYVCRVCHYPF
TVKANCERHLRKKHMKNTRKEIEKNIKYVSSTTTQDPLELASAGDTACRFCGEDLKSYRA
LQIHLRTHNGCQRKPFECRRCGAAFLAKRNCIHHMLKQHPEVQEREIEEHIATLLPAITA
TTSRASSSSPLALNGLMPTPSATVQPVKVEDFSVYSSSGDLDQPLDFSNKSRRGGGTSSS
SGSLAGSPGIKLETVSLVAYDSSMEPIDLSIPKNPNKRLKRDATAVDPMGVERREIKKEL
PFPSVLDHLPSALQLDKSYEENLKTPQSGSYQLPPLTISPLLISTPTATGRALRLKPLLP
KPTSSSSSLKELPPLASIAQIISSVSTAPDLLKREPTPDNKAGAGLNGLQTEPERLVGGY
NSSEASMEELPLEGSSRKRTRKKPASQAKTIAPARVPTPEQNTDSGMDLESSGEFASVEK
MLATTDANKFSTYLRTGAVELGRRDEGRQSQGEEKELPPQSVPPQSKGGKKNAYSNSVQK
MICPFCPRVFPWASSLQRHMLTHTVFSNVLSATGQKPFPCPKCDAFFSTKSNCERHLLRK
HGVTNHSLRRNGQMSKNKDGDEGSHDSAESSENEQTAGEALDLSSMDPDQKSSASESPST
DQTPDTAELLLGEMEPQPNNNIENDDNDDSQSNKSLDLNFASKLIDFKFSSEGQQPQTSL
VGDKVVAVAEPDRVTATQQQDQEPSKYTCKSCKKNFRYAATLARHEKAHLCETAPPEESC
GTEETGPAPEDLPNTTTTTAEEEDQEEGEKEAPESEGVGSVMDSGSEEEEKKEERSDEEG
AAEPKNEGEAGRGSGSKADKRKKICNVCSKRFWSLQDLTRHMRSHTGERPYKCQTCERTF
TLKHSLVRHQRIHLKPRGSEGADGADANGAEAPAGDSASEEGECTPTSTCPPSENESEGT
GGAREEGGEGTEKEAPLPDPTSLAQSLSTTEPAQSESATEAIAEPLVEPVSEAVSESVPD
SSVEQTSDGPSETDVELDAEVSASEMARETDGNAATQTPTETPKESSTESPAPQPTTPEK
DPDGPSEGFIQGLLEIHTKPSLEHILPAGEAPLVDVE
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgcaagcagcccaaccccaacaaagtcgaactgatggagagcaccacagag
gacacgcgtccggggggaggagtgagcgccgagctgagcgctggagagaccgaccactct
gagaagcaggagacccctgactgcacacacacacaggacaaacacacagggagtaacgga
gcgatggaggaagaggaggaggaaggtgcggctggagaaaatggagagaatatgacagag
gaggaaggcgtggacttgtcatccatcaacaccatgttgtcgacggtgatgaatgcaggc
cagctcaacggagccctggagccttccacaccctccaccgccatcagcaagaccactctg
cccagaccccctagtgtcaaccgcaatgcccggaggaacaccacggaagccaaagacttc
agtacagatttcatctgtcccctgtgtgacaaggactgtatgacccagcaccagctcact
atgcacatccgacagcacaactcggacaacggggcgacggaccactcatgcagcatctgt
ggcaaggccctgagctcagccagctcgctggaccgccacatgctagtgcacagcggagag
aggccatacaagtgctccttctgcggacagactttcaccaccaacggcaacatgcacaga
catatgaagatccatgacaaagacccggctggcgtcgttcccatcagcccccccttgccc
accaagagacgccgtccctccgccaagaggaggtcagccatggacgagaacaaggagcga
agtgaggaaccggccaaaaaaaaggtgctagaggagagtgtgttggaggagttgggttca
ggccagggggatgatgaggtgttgccgtgccctatctgcttcaagacctttggctgcaag
tacgacctggaagtccacatggacacacaccccgacaccacgctcaggtgtgacctgtgc
tgcctctccttccggacccaccgcggcctgctgcggcacaacgctggcatccacaagcag
ctgcccacggaccccggcggacgacccttcatccagaacaacccctccatcccctctggc
ttcaacgacctggccttcattgacttctcctgccacaagtttccccacatcgcccaggtc
tggtgtgagaccaacctccgccggtgcaccagcaagttccaccgcttcgtgtgtgaagcc
tgcgacaaaggattccccttgctctcggccctggtcctgcacaggaccaccattcatcag
cagcagccatcacccacagagggcgcccaggagccacccgcggcccaggagaagccggca
accccggcccctcagcaggccagcttcctggagaccctgggtctgcagcacatctcccag
gtcaagcttcagccttcggaggatgaggtccggcaagcccagctggacagcatccgggtc
atccaggttgagcctctggcctccaccctgccccaggaggtggattccgcggctgcggga
tccctcggcggcctggggttggtggcggcctcgtccctgcagggcctttcccagagggag
gccctcagcctgctctccctgcagcccttccccacaggtttcctcttccgcccaggtggt
ggtactgcggtcaagcctgtgtgtggcgaggctggcctgatggagctggctgacatccag
cagatcctgaaggtggcctcgaccgcccccggtcagatgggcctcctgccgtccctggcc
aaggctccccactggggagtgtccggccagggccaggcggccggctgcaagcacatgccc
ccactgaagccaaagcccatggtggcaccacgctccagcctggctgcctccacgctgccg
ccgcttcagagcacccagcaggcctccctgggctgcatcagccccagcctgcccccgcca
gccagccagctgctcaatatgccccaagagtcttcgtcatcgtcctcctcttcctcgggc
agccaagcctccctggagaagatgcagatggaagcggacttcatgggcgacgcccatatg
cccaacgactcgacagagctgcaaatcaaacaagaggagggccaggcggccggagggaag
aagggggcagggggttccaaccgcggcggcgtcaaggcctcctacccctgtcgcttttgc
gatcaggtgtttgtttactccggggtgctgcaggcgcacatgcgcttccacctgggcatc
ctgccgcaccagtgcaacatctgcgactacgtggcgcccgacaaggccacccttatccgc
cacctgcgcacgcacagcggcgagcgcccctacgtttgccgcgtctgccactaccctttc
accgtcaaggccaactgcgagcgccacctgcgcaagaagcacatgaagaacacaaggaaa
gagatcgagaagaacatcaagtacgtctcgtcgaccaccacccaggatcccttggagctg
gcctccgccggcgacaccgcctgccgtttctgtggtgaggatctaaagagctaccgggct
ctccagattcacctacgcacccacaacggctgccagcgcaagccctttgagtgccggcgg
tgcggggcggctttcctggccaagaggaactgcatccaccacatgctcaagcagcacccc
gaggtgcaggagcgggagatcgaggagcacattgccacccttctccccgccatcacagcc
accacctccagggccagctccagcagccctctggctctcaacggccttatgcccaccccc
agtgccaccgtgcagccggtcaaggtggaggatttcagcgtctactcctcctccggtgac
ttggatcagccattggacttctccaacaagagccgcagggggggtgggaccagcagcagt
tcagggagcctagccggttctcctgggatcaaactggagacggtcagcctggtagcctac
gacagctccatggaacctattgacctgtccatccccaagaaccccaacaagaggctgaag
agagacgccaccgctgttgacccgatgggcgtggagcgccgagagatcaaaaaggagctg
cccttccccagtgtactggaccacctcccctcagcccttcagctggacaagagctatgag
gagaatctgaagaccccccagtctggctcttaccagctccccccattgaccatctccccg
cttctcattagtacccctactgccacaggccgggcgctccgtctcaagcccctgctgccc
aaaccgacctcttcttcctcctccctgaaagagcttccccctctggcttccattgcccag
atcatctcctccgtctcaacggctccagatttgctcaagagggagcccacgccggataac
aaggctggcgccggcctcaacggcctccagacagaacctgagcgtttagttgggggctac
aacagctctgaagcctcgatggaagagctccccctagagggctcgtccagaaagcgcact
aggaagaagccagcgagccaggccaagactatagcacctgcccgtgtgcccacgcccgag
caaaacacagacagcggcatggacctggagtccagtggggagtttgccagcgtggagaag
atgctagccaccaccgacgctaacaagttcagcacctacctgcggacgggtgcggtggag
cttggaaggagggacgaggggagacagagccagggagaggagaaagagttgcctcctcag
tctgtgccgccccagtccaaaggagggaagaagaatgcctactccaactcggtgcagaag
atgatctgtcccttctgcccccgggtcttcccctgggccagctccctgcagaggcacatg
ctcacacacactgtcttctctaatgtgctgtcggctacaggtcagaagcccttcccctgt
cccaaatgtgacgccttcttctccaccaagtccaactgtgagcgccacctgctgcgcaag
catggcgtgaccaaccactcgctgcgccgcaacggccaaatgtccaagaacaaggatggc
gacgagggttcacacgacagcgcagagagctctgagaatgagcagactgcaggagaggct
ctggacctgagcagcatggaccccgatcagaaaagctctgcatccgagtcgcccagcaca
gaccaaacaccagacactgctgagctgctgctaggggagatggaaccgcaacccaacaac
aacattgaaaatgacgacaacgacgattcgcagagcaacaagagcttggacctcaacttt
gccagcaagctcatcgacttcaagttctcgtcagaaggccagcagccccagacctccctg
gttggagataaggtggtggcggtggccgagccagatagagtgacggccacccagcagcag
gaccaagagccctccaagtacacctgcaagagctgcaagaaaaacttccgttatgccgcc
accctggctcgccacgagaaggcacacttgtgtgagactgcaccccccgaagagtcttgt
ggaacagaggagactgggcctgccccagaggatctccccaacactactacaaccaccgcc
gaggaggaggatcaggaggagggagagaaggaggctccggaaagcgagggagtgggcagt
gtgatggacagtggttcagaggaggaggagaagaaggaggagagaagtgacgaggagggg
gcagcagaaccaaagaatgaaggagaggcaggcagagggtcggggagcaaggcggacaag
aggaagaagatctgtaacgtgtgcagcaaacgcttctggtcactgcaggatctgacaaga
cacatgcgttcgcacacaggtgagaggccctacaagtgccagacgtgcgagcgcaccttc
accctgaagcacagcctggtgaggcaccagcggatccacttgaagccacggggcagcgag
ggggcagatggagctgatgccaacggggcagaggccccggccggggactcagctagtgag
gagggagagtgcacccccaccagcacctgccccccttcagaaaacgagagcgaaggcacc
ggaggggccagagaggagggaggcgagggaactgagaaagaggcccctctgccagacccc
acatccctggcccagtccctgtccaccactgaaccagcccagtcagagtcagctacagag
gccatagctgagccgctcgttgagccagtctcggaagcagtctctgaatcagttcctgac
tcatctgtagaacaaacctcagacggaccctctgaaacagatgtagaactagacgctgag
gtatcagcctctgaaatggctagagaaacagatggcaatgcagccactcaaacgccaaca
gaaacccccaaagaatcttccacagagtccccagccccacagcccactaccccagagaaa
gaccctgatggcccctcggaaggcttcatccaaggcctactggagatccacaccaagcct
tccctggagcacatccttcccgctggcgaggctcccttggtggacgttgagtga
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integrated database retrieval system
