Salvelinus fontinalis (brook trout): 129823142
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Entry
129823142 CDS
T11136
Symbol
spata13
Name
(RefSeq) uncharacterized protein spata13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129823142 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129823142 (spata13)
Membrane trafficking [BR:
sfon04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129823142 (spata13)
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Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
129823142
NCBI-ProteinID:
XP_055737891
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All DBs
Position
25:32242150..32290663
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AA seq
1329 aa
AA seq
DB search
MRRAWQSDGTPSTSEDSLSYRRGSTSDPDLRPPPRPLSDLYPLKAHVSMAVPQSLLSGCD
AQVQPMTCDFNSEESRLNGFNTANWSSPVIGHPSRIMRLFSTQKKCTVPGDSQGSTRPLS
FQGPPSSAGVPQVWPGLSGLTVMGSFKKLRSSVLQGIQNRGTANQDDEYTSAAIQGGDNG
MVTTNQSPRLRCGEGYRVSNGVSIGQQMAGLSPYGSDNEDEEVVDEEDGLQRNTWFSRSI
RRAYGAGRITLLDAGEGKRGEGPGLGVSTNQRPSSGSGSVSEVNLHLEESVNENVNALSR
LSKSADNLHLFKGPFRHKVPCPSPQTDSPGANGDPSIQRTASASSGDLRDRSQSPVRFRS
PVGAKGHMLKLVGSMTDLTVRRRPNPSPVTSPGSPVTPLSPLSRLHDDYSRRTPCLPASD
RQRRPSPARTRAAAERKRNSTSVRLEHTPTIHPQPQSKYHPALFPIEPQEGPDHVFAFPS
INQPFTTTSFSLSAHAQRSSLCEGDRPQERQGDGWRARCDSAPHPQGEPCGSHSKHQPDV
NAEGKTEPKQCVWTRPDLDQEGRGHLWGTLDEQGREALLGGEETPPPSATSTPSLTPTCP
PESPTSPTKIGSTETSTSFIPRQRASRSRPRPISDYAQLVARKYAIPEEETELHPKERTT
NGTPCQDCKSNGGSQDSDSTENYNMNGDLQCRRRRPMSVIGGAEEREDRLPSPLSRPPVP
SHQVPPYKAVSARFRPSTFSQSTPIGLDRLGRRKLHRVLSVEADAGSERSAAVDGDSVSE
EEGSFDELSDVTTYLQPGVELSALSQWISQGQVVYAEALWDHVTMEEQELAFKAGDVIRV
LEAPHKDWWWGMGADREAWFPSSFVRVRVNQEEESGAESVESCALDQEDEHTDTRDTHTH
SAEHREQMRTNVVKEIMNTERIYIKHLRDICEGYIRQCGKHPGMFTELQLKTIFSNIEDI
YKFQRQFLKDLEKKYNTDQPHLSEIGACFLLQGEGFSIYSEYCNTHPAACGELQRLMKLG
RYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYGGVSDAYE
AMRNVASLINEGKRRLESVDAIAHWQVAILRWEGADVLERSSELIHSGELTRIVRQGNKT
QQRSFFLFDHQLVFCKKDVLRRDLLHYRGRLDMDNTSVLQMPDGRDPELGILLRNALRLR
NSSTLETLCYLCCRKPQDRQRWLQAFARERQRVQEDQEMGMKISETQRKQAIFNARRSKQ
GKMKTIGYSGSVPPHHHHHHHHQPLHPIHQRHVTVPTSVPQQQVFTLAEPKQKPAHLWYT
FTRHALFRK
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgagaagggcatggcagagcgatggaaccccgtccaccagcgaggactctctctcctac
cgccgtggctccacatccgaccctgaccttcgacctccaccccgacccctcagcgacctt
taccccttgaaggctcatgtttcgatggcagtgccccagtctctgctgtctgggtgtgat
gctcaggtacagcccatgacctgtgactttaacagtgaagagagtagactaaacggtttc
aacacagccaactggtccagccctgtgataggccacccctccaggatcatgaggctcttc
tctacccagaagaagtgcactgttcctggagacagtcagggctctaccaggcccctctcc
ttccagggccctccatccagtgccggggtcccgcaggtttggccaggcctgtcagggctg
accgtcatgggctcctttaagaagctacgctcctcagtgctccagggcatccagaaccga
gggacagccaatcaggatgacgagtacacctcagcagccatccagggtggagataatgga
atggtcacaaccaatcagagcccaagacttagatgtggggagggctatagagtctccaat
ggggtgtctattggccaacagatggctgggttgagcccttatggttctgacaatgaagat
gaggaggtagtagatgaggaagatggactacagagaaacacatggttctccaggagtatc
cggagagcgtacggggcggggcgcatcacactgctggacgctggggaggggaaacgaggg
gagggtccaggactgggggtttcaaccaatcagaggccaagttcaggctccggttcagtg
tcagaggtgaacctccatttggaggagagtgtgaatgaaaatgtgaacgcgctaagcaga
ctgagcaagagtgcagacaacctacacctctttaagggccctttcagacacaaagtcccc
tgtccctctcctcaaacagactccccaggtgccaatggggaccccagcatccagagaaca
gccagtgcctcatccggtgaccttagggaccgcagccagagccctgttcgctttaggagt
ccagtgggggccaagggccacatgttgaagctagtgggcagtatgactgacctgaccgtg
agacgcaggcctaacccgtctcctgtcacctccccaggctcccccgtgacccccttgtca
cccctcagccgtctccatgacgactactcgcgccgcacgccctgcctgcccgccagcgac
cgccaacgccggccctcgcctgccagaacgagagctgcagcggagaggaagaggaacagc
acttcagtacgactggaacacacgcctaccatccacccccagccccagtctaagtaccac
ccagccttgttccccatagaaccccaggagggaccagaccatgtcttcgctttccccagc
attaaccagcctttcactacaacctcattttccctgagtgctcatgctcagaggagcagc
ctgtgtgagggggacaggcctcaggagagacagggagacgggtggagagcacggtgtgat
tccgctccacacccccagggggagccctgtgggagtcacagcaaacaccagccagacgtc
aacgcagagggaaagacggaaccaaagcagtgcgtatggaccagaccagacctagatcag
gagggaagaggacatctctggggtacgttagatgaacagggcagagaggcactattaggg
ggtgaagagacgccccctccttcagctaccagtaccccttctctcacaccaacatgtccc
ccagagtctcccacttcaccgacgaaaataggttccacagaaacgtccacgtccttcatc
cccaggcaaagggcgagccgatcgaggcctcggccaatctctgactacgctcagctggta
gccaggaagtacgccatccccgaggaggagacggagctacatcctaaggagaggactaca
aatggaactccctgtcaagactgcaaaagcaatggaggctcgcaggacagtgacagcaca
gagaactacaatatgaatggagatctccagtgccggaggagacggccaatgtctgttatt
ggaggagctgaggagagagaggaccgtctgccttctcctctgtcgcgcccccctgtcccg
tcccaccaggtgcccccctacaaagcggtgtcggccaggttccgcccctccaccttctcc
cagagcacccccatcggactggaccgcctcgggcgacgcaaactacacagagtcctcagt
gttgaggcagacgccggttcagagcgttctgcagcggtggatggtgacagtgtgagtgag
gaggaggggagcttcgatgagctcagtgacgtcacaacgtacttgcagcctggggtggag
ctgtctgctctcagccagtggataagccagggtcaagtggtgtatgcggaggccctgtgg
gaccatgtgacgatggaggagcaggagctggcgttcaaggcgggggatgtgatccgggtg
ctggaggcccctcacaaggactggtggtggggcatgggggcagacagggaggcctggttc
ccctctagcttcgtcagggttcgtgtgaaccaggaggaggagtcaggagcagaaagtgta
gagagttgtgctctggaccaagaggacgaacacactgacacccgggacactcacacacac
agcgccgagcaccgtgagcagatgaggactaacgtggtcaaagagatcatgaatactgaa
cgcatctacatcaaacatctccgggacatctgtgagggctatatccgtcagtgtggtaaa
cacccgggcatgttcactgagctgcagctgaagaccatcttcagtaacatcgaggacatc
tacaagttccagagacagttcctcaaagacctggagaagaagtacaacacagaccagcct
cacctcagtgagataggagcctgtttcctcttacagggggagggtttttccatctactct
gagtactgtaacacccaccctgcagcgtgtggggagctgcagcgcctcatgaagctgggc
aggtacaagcacttctttgaggcctgccggctgctgcagcagatgattgacatctccatc
gccggcttcctgctcacgcccgtccagaagatctgcaaataccccctgcagctgggagag
ctgctcaaatacacccccaaagaccacagtgactatggtggagttagtgacgcgtacgag
gcaatgaggaatgtggcgagcctgatcaacgaggggaaaaggaggctggagagtgttgac
gccatagctcactggcaggtggccatcctacgctgggagggagcggatgttctggagcgc
agctcggagctgatccactctggggaactcacccggattgtccggcagggcaacaagacg
cagcagcgcagcttcttcctgttcgaccaccagctggtgttctgtaagaaggacgtactg
cgccgcgacctgctgcactaccgtggtcgcctggacatggacaacacatcggtgctgcag
atgcccgatggcagggaccccgagctgggcatcttgctgaggaacgccttgcggctccgg
aacagctccaccctggagaccctgtgttacctctgctgcaggaaaccccaggatagacaa
cgctggctgcaggccttcgccagggagagacagagggtacaggaggaccaggagatggga
atgaagatcagtgaaacgcagagaaaacaagcaatcttcaatgcaagaagatccaaacaa
gggaaaatgaagaccataggctactctggctctgtcccgccccaccaccaccaccaccac
caccaccaacccctgcatccaattcaccagcgccatgttactgtgccaaccagtgtgcct
cagcagcaggtgttcacattggccgagcccaagcaaaagcccgcccacctgtggtacacc
ttcacccgacatgccttgttcaggaagtga
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