Salvelinus fontinalis (brook trout): 129823293
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Entry
129823293 CDS
T11136
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129823293 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfon01007
]
129823293 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129823293 (gars1)
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129823293 (gars1)
Enzymes [BR:
sfon01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
129823293 (gars1)
Amino acid related enzymes [BR:
sfon01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129823293 (gars1)
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129823293 (gars1)
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
129823293 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
Motif
Other DBs
NCBI-GeneID:
129823293
NCBI-ProteinID:
XP_055738202
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All DBs
Position
25:42747444..42787012
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AA seq
748 aa
AA seq
DB search
MLRSATSALLRTSIEIRTVRSVPRVCRFLQSLLRCPTQNRSLSLSVCLWKKKKSLWLELS
EGHKMSGNIEEILAPLRLAVKEQGELVRQMKQDGTPDVDVLKAVAELKARKRTLETKELS
LQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRQHFIQ
EEQILEIDCTMLTPETVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKC
PAKNKAEMEEVVTQMDNYTQQELTDLFVKYSVKSPTTGNDVSAPHLFNLMFQTSIGPGGN
MTGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEI
EHFVDPTEKFHPKFPNVADLEIILYSSKAQTSGQSAHVMRLGDAVEQGVINNSVLGYFIG
RIYLYLTKVGVAKDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCFDLLC
HARATKVPLVAEKPLKEPKVVDIVQFEPNKGAIGKAYKKDAKLAMEYLAVCDECFITEQE
MLLNSSGEFTIETEGKTFKLTKDMVSVKRFQKTLHVEEVVPNVIEPSFGIGRVMYSIFEH
TFQVREGDEQRTFFSFPATVAPYKCSVLPLSQNQEFVPFVKELSEAMTKQGVSHKVDDSS
GSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPGIIRDLAN
GVMTWAEVESKYPVFEGQETSKKDTAEE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtagcgcaacatcagcactgctgaggaccagcattgagattcgcactgttcgc
tcggtgccgagggtctgccggtttctacagtcgctgctgcgctgtccgacccaaaacagg
tcgttatctctgtcggtctgcttgtggaagaagaagaaaagtctttggctggagctttcc
gaaggacacaaaatgagtggcaatattgaagaaatcctcgccccactgaggctggcagtg
aaagaacagggggagctggtgcgccagatgaagcaggatggtacccctgatgttgacgtc
cttaaagctgtggctgaactgaaagccaggaagagaactctggaaacgaaggaactgtct
ctgcagcccaaagacgacattgttgacagagccaagatggaagatacgttgaagaggaga
ttcttctacgaccaggccttcgctatctatggaggtgtgagcgggctgtatgactttggc
cctgtgggctgtgccctgaagaacaacatcttacaggcctggaggcagcacttcatccag
gaggagcagatcctggagatagactgcaccatgctcaccccggagaccgttctcaagacg
tctggacacgtggacaagtttgcggactacatggtgaaagacgtgaagaacggagagtgt
ttcagggcagaccacctcctcaaagctcatctccagaagctgatgtcggacaagaagtgt
cctgcaaagaacaaggcagagatggaggaagtcgtcactcagatggacaactacacccag
caggagttgacggacctctttgtgaaatacagtgtcaagtcccccaccacaggaaatgac
gtttcggcccctcatctcttcaacctgatgttccagacgtctatcggaccggggggaaac
atgacgggttacttgaggcctgaaactgctcagggaatcttcctgaacttcaagcgtctg
ttggaattcaaccaggggaagcttcccttcgctgctgctcagatcggcaactccttcagg
aacgagatctcacctcgctcaggactcatccgtgtcagagagttcaccatggctgagatt
gagcactttgtggacccgactgagaagttccaccccaagttccccaacgtggctgacctg
gagatcatcctgtactcctccaaggcccagaccagcggccagtctgctcacgtcatgagg
ctgggcgatgctgtggagcagggggtgatcaataactccgtcctgggatatttcatcggg
agaatctacctctacctcactaaagtgggtgtggccaaagacaagcttcgcttccgtcag
cacatggacaacgagatggcccactacgcctgtgactgctgggacgcagagaccaaaaca
tcctatggctggatcgagatagtgggctgtgccgaccgctcctgtttcgacctgctgtgc
cacgcccgggctaccaaggtccctctagtggccgagaagcctcttaaagaacccaaagta
gtagatatcgtccagtttgagcccaataagggagccatcgggaaagcctataagaaggac
gccaaactagcgatggagtacctagctgtctgtgacgagtgtttcatcactgaacaggag
atgctactcaacagcagcggggagttcaccatagagacggagggaaagacttttaaactc
accaaggacatggtcagtgtgaagcgctttcagaagaccctgcatgtggaggaggtggtc
cctaatgtcatcgaaccctcctttggcatcggtagagtcatgtactccatcttcgagcac
acattccaagtccgagagggagacgaacagagaacgttcttcagcttccctgccactgta
gctccgtataaatgctccgtccttcctttgagccaaaaccaggaatttgtgccttttgtt
aaggaactctccgaagcgatgaccaaacagggcgtgtcccacaaggtggacgactcgtca
ggatccattgggaggcgctacgccaggacagacgagatcggagtggcgttcggcatcacc
atcgactttgacacggtgaacaagacgccccacaccgccactctgagggaccgcgactcc
atgaggcagatcagggccgaggttagtgagttgccaggaatcatccgtgatctggcaaac
ggtgtcatgacgtgggccgaggtggaaagcaagtaccctgtctttgagggacaggagacc
agcaagaaggacacggccgaggaatga
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