Salvelinus fontinalis (brook trout): 129823610
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Entry
129823610 CDS
T11136
Name
(RefSeq) vimentin-like
KO
K07606
vimentin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129823610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129823610
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129823610
04147 Exosome [BR:
sfon04147
]
129823610
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
129823610
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
129823610
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129823610
Exosomal proteins of other cancer cells
129823610
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
CCDC39
FKBP15
TPR
HIP1_clath_bdg
DUF7801
TolA_bind_tri
TPR_MLP1_2
Myosin_tail_1
DUF7491
DUF1664
Fib_alpha
Laminin_II
Spidroin_N
Motif
Other DBs
NCBI-GeneID:
129823610
NCBI-ProteinID:
XP_055738443
LinkDB
All DBs
Position
26:8437141..8470456
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AA seq
503 aa
AA seq
DB search
MGTVTRETEQHRTGPRPNPEELKLSSLTSSTEETGHLRMTAARGPQSSYKKYFGGERNMS
HSAYPSSRQLYSNPVAVRSSRVSFGLSSAAPGVYATRTQRLRSSAPMPRLSSETLNFSLS
DAVNSEFKTNRTNEKAQMQSLNDRFASYIEKVRFLEQQNKILQAELEQLRGKGTSRSRIG
DLYEDEMRELRRQVDQLTNEKARVEVHRDNMSDDIDRLREKLQEEMMQREESESTMQSFR
GDVDNAALSRLDLERKVESLQEEINFLKKLHDEELLELQSQVQVSQQVQMDIDVVKPDLT
GALRDVRSQYENLASKNMQESDDWYKSKFADLTDSAARNNESLRIAKQEGNDYRRQVQAL
TCEIDALKGSNESMERQMREMEENFSMESSGYQDNVSGLEEDIRNMKDEMARHLREYQDL
LNVKMALDIEIATYRKLLEGEENRITSPLPNFSSLNLRETMMDSRPMVETTMSKKVLIKT
IETRDGQVINESMNHDDPIDVFN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgtgacgagagagacagaacagcacagaacaggaccgagacccaacccagag
gaactaaaacttagtagcctaactagctccacagaagagaccggacatctcaggatgaca
gcagcccgtggtcctcagtcctcctataagaagtattttggaggggaaaggaacatgagc
cactccgcctacccctccagccgccagctgtactccaacccggtggcggtgcgctcctct
cgggtctctttcggcctgtcctccgccgccccgggggtctacgcaaccaggacccagcgg
ctccgcagcagcgccccgatgccccggctgtcctccgagaccctgaacttctctctgtcc
gacgccgtgaactccgagttcaagactaaccggaccaacgagaaggcgcagatgcagtcg
ctcaacgaccgcttcgcgagctatatcgagaaggtccggttcctggagcagcagaataag
atcctgcaggcagagctcgagcagctacgagggaagggcacgtcccgatcccgcatcggg
gacctgtacgaggacgagatgcgcgagctgcggcgacaggtggaccagctgacgaacgag
aaggcgcgagtggaggtgcaccgggacaacatgtctgatgatatagaccgactcagagag
aaactgcaggaggagatgatgcagcgtgaggaatctgagagtaccatgcagagcttcaga
ggggatgtggacaacgcagctctgtctcgtctggacctggagaggaaggtggaatcgctt
caggaggagatcaacttcctgaagaaactacacgatgaggagctgttggagctgcagtct
caggtgcaggtgtcgcagcaggtgcagatggacattgatgtggtgaagccagacctgacg
ggcgctctccgggacgtccgctctcagtacgagaacctggcctccaagaacatgcaggag
tcagacgactggtacaagtccaagtttgctgacctgactgattctgcagcccgtaacaac
gagtctctacgtattgctaagcaggagggtaatgactacagacgccaggtgcaggcactc
acctgtgagatcgatgccctgaagggaagcaatgagtctatggagcgccagatgagggag
atggaggagaacttcagtatggagtcatctggttaccaggacaacgtcagtggtctggag
gaggacattaggaacatgaaggatgagatggccagacacctcagagaataccaggatctc
ctcaatgtcaagatggccctggacatagagatagctacctacaggaaactactggagggg
gaggagaacagaatcacctctccgttgccaaacttctcctccttaaacctgagagaaacc
atgatggattccagacccatggttgaaaccacaatgtccaaaaaggttctgatcaagacg
atcgagaccagagatggacaggtgatcaatgagtccatgaaccatgacgaccccatcgat
gtcttcaactag
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