Salvelinus fontinalis (brook trout): 129823765
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Entry
129823765 CDS
T11136
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129823765 (cpdp)
Enzymes [BR:
sfon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
129823765 (cpdp)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
129823765 (cpdp)
Prokaryotic type
129823765 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
129823765
NCBI-ProteinID:
XP_055738703
LinkDB
All DBs
Position
26:17175523..17193510
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AA seq
550 aa
AA seq
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MHRSLLLIPASKHIWKFVTLESQRHCSFTKLVGPSSINNRTTMPAEKRKATFAKMDSTKQ
QKLQAVKEGKGEREEGWLQGVVAKQQKDNDLKFNKKRLRFLSQTQKIKQGSEGVVYWMNR
DHRVQDNWALIYAQQLALEEKLPLHICFCLVIPQNSESATIRHFGFMLRGLEEVAKDCSA
LDIQFHLLQGSAGELLPGFVADWSFGAVVTDFSPLRTPLQWVEEVKKGLPSDIPFIQVDA
HNVVPCWVASDKLEYSARTIRNKITKLLKEFLTEIPLVDKHPHTALRTAKPVDWAEALSS
LDVDRTVKEVDWAKSGTAAGIAMLESFIDLRLKNFATQRNNPNSSAVSQLSPWIRFGHLS
AQRVVLQVKCCGKSAGESVSSFTEELVVRRELTDNFCFYNPSYDSVKGANDWAQKTLKDH
AKDPRPYVYTREQLEKAQTHDKLWNAAQYQMVIEGKMHGFLRMYWAKKILEWTSSPEGAL
SIAIYLNDRYELDGQDPNGFVGCMWSICGVHDQGWAERPIFGKIRYMNYKGCTRKFDVAQ
FERKYCPKDL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcagtttgttgctcattccagcatccaagcacatttggaagtttgtgacactc
gagagccaaagacactgctcctttaccaaattagtaggcccaagcagcattaataatcga
accaccatgccagcagaaaaacgcaaggcaacatttgccaaaatggacagcaccaaacag
cagaagctgcaggctgtaaaagaggggaagggggagagagaagagggctggctgcagggt
gtggtggcaaagcaacagaaggacaatgacttgaaattcaacaagaagcgcctccgtttt
ctgtctcaaacccagaagataaagcaaggttcagagggagtagtctactggatgaacagg
gatcacagggtccaagataactgggcattaatctatgcccagcagcttgccctagaagag
aagctgcccctgcatatctgtttctgtttggtgataccacaaaactcagagtcggccacc
atccgccattttggcttcatgctgaggggactggaggaagttgctaaggactgcagtgcc
ctggatattcagttccacctgctccagggctccgctggagaattgctgccagggtttgtg
gcggactggagttttggggcagtagtgactgacttctcccctctaaggacaccgctgcag
tgggtggaggaggtcaaaaaggggcttccatcggatatccccttcatacaagtcgatgcc
cataacgtggtgccctgctgggtggcatcagacaaactggagtattctgccaggacgatc
cgtaacaagatcaccaagcttctgaaggagttcctcacagagatacctttagtggacaaa
cacccacacactgctctccgaaccgccaaaccagtagactgggcagaggcattgtcctct
ctggatgtggacaggacggtaaaggaggtggattgggccaagtctggcactgcagcaggc
atagccatgttggaatctttcatcgacctgcgcctcaagaactttgccactcagaggaac
aaccccaattcttctgccgttagtcaactctcgccgtggatccgcttcggtcacttgtct
gcccagcgtgtggtgctgcaggtaaagtgctgtgggaagagtgccggcgaatccgtttcc
tccttcacagaagaactggtggtgcgcagagagttgaccgataacttctgtttctacaac
cccagctatgacagcgtaaagggtgcaaatgactgggcccagaaaacgttgaaagatcac
gccaaagaccccaggccatacgtctatacccgcgagcagctggagaaagcccagacccac
gacaagctctggaacgcagcccagtaccagatggtgattgagggtaagatgcatggcttc
ctaaggatgtactgggccaagaagatcctggagtggacctcctcaccagagggagcgctc
tccatcgccatctacctcaacgaccgatatgagttggacgggcaggaccctaacggattc
gtaggttgtatgtggtccatatgtggggtccatgaccagggctgggccgagagacccatc
ttcggaaagatacggtacatgaactacaaaggctgcacccgcaagtttgacgtggcacag
tttgagaggaagtactgccccaaagacctgtaa
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