Salvelinus fontinalis (brook trout): 129823787
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Entry
129823787 CDS
T11136
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03272
Virion - Hepatitis viruses
sfon04382
Cornified envelope formation
sfon04514
Cell adhesion molecule (CAM) interaction
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
129823787 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129823787 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129823787 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129823787 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129823787 (cldn1)
04147 Exosome [BR:
sfon04147
]
129823787 (cldn1)
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129823787 (cldn1)
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
129823787 (cldn1)
Exosomal proteins of colorectal cancer cells
129823787 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF7937
TMEM37
DUF6479
OppC_N
Motif
Other DBs
NCBI-GeneID:
129823787
NCBI-ProteinID:
XP_055738733
LinkDB
All DBs
Position
26:complement(17885807..17894042)
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AA seq
211 aa
AA seq
DB search
MANAGIQLLGFVLSFFGFIGLIASTIMAEWKLSSYAGDNIITAQAMYEGLWKSCVSQSTG
QIQCKVYDSLLQLTGMVQGTRGLMVGAILLAGIAILVAMVGMKCTTCLAEDQEQKRKVAL
TGGIVIIIAGLCALVGTSWYGNRIAKEFYDPFTPTNSRYEFGKALFVGWGSACLTIIGGA
FLCCNCSSKGSGKSSRYPPNHSAAPAGRDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcggggatacagctccttggattcgtcttgtctttttttggcttcatcggg
ttgatagcatccacgatcatggccgagtggaaactgtcatcctatgctggggacaacatc
ataacggcgcaagccatgtacgaggggctttggaagtcttgtgtgtcacagagcactggt
caaatccagtgtaaagtgtacgattctctgctccaactaacggggatggtgcagggcaca
cgaggtctcatggtgggtgccatcctgctggctggcattgccatcctggtggccatggtg
ggcatgaagtgtaccacctgtctggctgaggaccaggagcagaagcgcaaagttgccctg
actggaggaatcgtcatcattatcgcaggtctgtgtgctctggtggggacttcctggtac
gggaacagaatagcaaaggaattctacgaccccttcactcctacaaactccaggtatgag
tttggcaaggccctgttcgtaggttggggttctgcctgcctcaccatcataggtggagcc
ttcctttgttgcaactgctccagtaaaggctcaggaaagtcctcccgctaccccccgaac
cactccgctgccccggcaggcagagactacgtctag
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