Salvelinus fontinalis (brook trout): 129823830
Help
Entry
129823830 CDS
T11136
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfon03032
]
129823830 (pif1)
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129823830 (pif1)
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129823830 (pif1)
DNA replication proteins [BR:
sfon03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
129823830 (pif1)
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
129823830 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
UvrD_C_2
AAA_22
DEAD
Herpes_Helicase
Mg_chelatase
ABC_tran
AAA_16
RsgA_GTPase
AAA_7
PhoH
AAA_5
Motif
Other DBs
NCBI-GeneID:
129823830
NCBI-ProteinID:
XP_055738831
LinkDB
All DBs
Position
26:complement(18917075..18926373)
Genome browser
AA seq
645 aa
AA seq
DB search
MSPHIVTMFQGDDGAQLQCTVVVERLNSSGQATKRQVIRKAAVLLGRNEFQEIILRVHDG
KVVPQSYTLKEFQLFTRFAKDGKCTVKLLPENIQVLFSDCPPHLLNVFLKTLSIKHQAWQ
TSKPMTDREKLKACLPRSFETISPLQQKDVQKASELRSKVNAPGLSKGLVVRTGNERTGG
QQVKRQRTDCDSSPLKALHPSKKPTLSLPTARKLNTEQAAVLSAVLSGKNVFFTGSAGTG
KSFLLKRIVGSLPPKSTYATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGV
LQHWTSCRHLIIDEISMVEAQFFDKLEAIARSLRRSTEPFGGIHLIVCGDFHQLPPVSKG
KDKAMFCFQSRSWRKCIHLNMELTEVRRQSDQSFISLLQAVRVGRVTEEFTAKLMKSAYH
KIERDGILATRLCTHKDDVELTNDNKLQQLPGSVRVFEAVDSDPALVKTIDSQSPVSRLL
ELKVGAQVMLTKNLDVQRGLVNGARGVVVDFQPSKLGLPRVRFLCGTTEALKPERWMFKA
GGGLYLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFERGQAYVALSRAKSLEGLRV
MDFDPHVVRADPDVLHFYSKLRKERLLLQASMNEFVGKSNKENRW
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgcacattgttacaatgttccaaggggacgacggtgcccagctccagtgcact
gtcgtggtggagcgcctgaactcctctggccaggccaccaaacgccaagtcatccggaag
gcagctgttcttctcggtcgcaacgagttccaggagataatcctgcgcgtgcacgacggt
aaagtcgtgccccaaagttacacgctcaaagagttccagctttttacccggtttgccaag
gatggcaagtgcaccgtcaaactgctccccgaaaacatccaagtactcttctctgactgc
ccgccccacctactaaacgttttcctgaagaccttgagtataaaacaccaggcctggcag
actagcaaacctatgacagaccgagagaagctgaaagcctgtctgccccgcagcttcgag
accatcagcccattacagcagaaggatgtacagaaggccagtgagctgaggagtaaagtg
aacgcgccagggctctctaaaggtctggtagtgaggactggtaatgagagaactggagga
cagcaggttaagagacaaaggacggactgtgactctagtccattgaaggcactccaccca
agcaaaaagcccaccctgtctctaccaacggcacggaagttgaacacagaacaagccgct
gtcctcagtgctgtgttgagtgggaagaatgttttcttcaccggcagtgcaggcacaggg
aagtccttcctgttgaagaggattgtgggctcgctgccgcccaaaagcacctacgccacg
gccagcacgggcgtagcggcgtgtcacatcggggggaccacgctacacaactttgctggt
atcgggtcaggctcagcccctctggagcagtgtatagagctggcccagaggcccggggtc
ctgcagcactggactagctgtcgccacctcatcatcgacgagatctccatggttgaggcc
cagttttttgacaagctggaggccatagccaggtctctgaggaggtccacagagccgttt
ggaggaatccatctgatagtgtgtggggacttccaccagctgcccccggtctccaaggga
aaggacaaggccatgttctgcttccagtctagaagctggcggaagtgcatccatctgaac
atggagctgactgaggtgcgcagacagtctgaccagtctttcatctccctcctgcaggca
gtgagggtgggcagagtcacagaggaattcactgccaagttgatgaagagcgcctatcac
aagatcgagcgggatggtatcctggcaaccaggctttgcactcacaaggacgacgtagag
ctcactaacgacaacaagctccaacagctgccagggtcagtgcgggtgtttgaggctgtg
gacagcgaccctgcactggtgaagaccatagacagccagagtcccgtcagcaggctgctg
gagcttaaagtgggcgctcaggtcatgctaacaaagaacctggacgtccagcgtgggctg
gtcaacggggctcgaggtgtcgtagtggactttcagccgtcgaaactagggctcccacgt
gtgcgtttcctgtgtggcactactgaagcgttgaagccagagcgctggatgttcaaggcc
ggaggcgggctctatctgagccgccagcagctgccactcaaactggcctgggccatctcc
atccacaagagccagggcatgacgctggactgtgtggagatctccctggcacgggtgttt
gagagaggccaggcctatgtggcgctgtctcgggccaagagcctggaggggctaagggtc
atggactttgacccccatgtggtccgtgccgaccccgacgtgctgcacttctacagcaag
ctgaggaaagagaggctactgttgcaggcttcaatgaatgagtttgtgggcaaaagtaac
aaggagaaccgttggtga
DBGET
integrated database retrieval system
