KEGG   Salvelinus fontinalis (brook trout): 129823878
Entry
129823878         CDS       T11136                                 
Name
(RefSeq) coatomer subunit beta' isoform X1
  KO
K17302  coatomer subunit beta'
Organism
sfon  Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfon04131]
    129823878
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfon04147]
    129823878
Membrane trafficking [BR:sfon04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    129823878
Exosome [BR:sfon04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   129823878
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 129823878
NCBI-ProteinID: XP_055738913
LinkDB
Position
26:20648767..20670919
AA seq 941 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTSGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEDSFFILRYLSEKVAASQENNEGVTEDGIEDAFEVQGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDSEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNAAMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDHCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLKESFVAEQFLRETCLGNSRPATDYPLITPNEERNILEEA
TGYEPKGAPLSLATPVLQAEDSGEETMPAAGVMASVLAAVVAAAVIPSEAEPEVAPEEES
PSSSESQKDKVLDELEDDLDNMELDDIDTSDINLDEDFLDD
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgcctctcaggctggacatcaagcggaagctgacagcccggtcagaccgcgtgaagagc
gtggacctccacccgaccgagccgtggatgctggccagcctgtacaatggtagtgtctgt
gtctggaaccacgaaacacagaccttggtgaagaccttcgaagtgtgtgaccttccagtg
agagcatcgaagtttgtagccaggaagaactgggtcataaccggcgcggatgacatgcag
atccgtgtgttcaactacaacaccctggagagggtccacatgtttgaggcccactctgac
tacatccgctgtatcgccgtgcatcccacccagccctacatcctcacaagcagtgacgac
atgctaatcaagctgtgggactgggagaagaagtggtcttgcagtcaggtgtttgagggc
cacacccactacgtcatgcagatcgtcatcaaccctaaagacaacaaccagtttgccagc
gcttctctggacagaaccatcaaggtgtggcagctgggctcctcctctcctaacttcact
cttgagggccatgagaaaggagtcaactgcattgactactacagcggaggggacaagcca
tacctcatatcaggtgctgatgaccgtctggtcaagatttgggactaccagaacaagacg
tgtgtgcagaccctggagggccacgcccagaatgtgtcatgtgtcagctttcacccagag
ctgcctatcatcatcacaggctcagaggacggcactgtgcgtatctggcactcgagtacg
taccgtctggagagcacgctgaactacggcatggagcgcgtgtggtgtgtgtgtggcctg
agaggctccaacaatgtggcgctgggctacgacgaaggcagcatcatcatcaagctgggg
cgtgaggagccagccatgtccatggacaccagtgggaagatcatctgggccaagcactcg
gaggtgcagcaggcaaacctgaaggccatgggcgacacggagatcaaggatggagagagg
ctgccgctggccgtcaaagacatgggcagctgtgagatctacccccagaccatccagcac
aaccccaacggaaggtttgttgtggtgtgtggagacggagagtacatcatctacactgcc
atggccctgaggaacaagagcttcggctcagcgcaggagtttgtctgggcacacgactcc
tccgagtatgccatcagggaaagcaacagtgtggtcaaaatcttcaagaacttcaaggag
aagaagtctttcaagccagactttggtgctgaaggtatctatggaggctttttgctaggc
gtcaggtcagtgaacggtctggccttctatgactgggaaaacacagagctgatccgccgc
atcgagatccagcccaaacatatcttctggtcagactcaggggagttggtgtgtatagcc
acagaggattccttcttcatcctgcgctacctgtcagagaaagtagccgcctcccaagag
aacaatgagggagtgaccgaggatggcatcgaagacgcctttgaggtccagggggagatc
caggaggtggtgaagacaggcctatgggtgggagactgcttcatctacaccagctccgtc
aacagactcaactactttgtggggggagagattgtcaccatcgctcacctggacaggacc
atgtacctcctgggctacatccccaaggacgaccgcctgtacctgggcgacaaggagctg
aacatcgtcagctactccctactggtgtctgtgctggagtaccagacagctgtgatgcgc
cgggactttggcatggccgacaaagtgctgcccaccatccccaaggagcagaggacccgc
gtagcacacttcctggagaaacagggcttcaagcagcaggctctggccgtgtcatcagac
tcggagcacaggtttgagcttgctctgcagctgggggagctgaagatcgcctatcagctg
gctgtggaggcagagtcggagcagaagtggaagcagctggcagagctggccatcagtaag
tgccagtttagcctggcccaggagtgccttcatcacgcccaggactacggcggcctgctg
ctgctggccaccgcctcgggcaacgccgccatggtgggcaagctggccgagggcgccgag
cgggacggcaagaacaacgtggcattcatgacctacttcctgcaggggaaactggaccac
tgtctggagctgctgatccggaccaaccggctgcccgaggcggccttcctggcccgcacc
tacctacccagccaggtgtccagagtggtcaagctgtggagggagagcctggccaaggtc
aaccagaaggcggctgagtcactggccgaccccactgagtatgagaacctgttccccggg
ctgaaggagtcgttcgtggccgagcagttcctccgtgagacctgcctgggcaactcccgg
ccggccaccgactaccctctcatcacgcccaatgaagaacgtaatatactagaggaggcc
acgggctacgagcccaaaggagctccactctccctcgctacaccggtactgcaggctgaa
gacagcggcgaggagaccatgccggctgcaggcgtgatggcgtccgtgttggcggcggta
gtggctgcagccgtgatcccctcggaggcagagcctgaggttgcacctgaggaggaaagc
cccagctcatctgagtcacagaaggacaaggtcctggacgaacttgaagacgacctggac
aacatggagctggacgacattgatacctcggacatcaacctggacgaagacttcctagat
gactga

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