Salvelinus fontinalis (brook trout): 129823949
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Entry
129823949 CDS
T11136
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7-like isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129823949
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129823949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
129823949
NCBI-ProteinID:
XP_055739064
LinkDB
All DBs
Position
26:complement(22882908..23012040)
Genome browser
AA seq
3208 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPVGQQEHQDYGSLSSNSLHHPSQAV
PGKPKMGHPYDPFAGYEQQQDNGPTVNSMVTPHSRYHNSPQQPGGGHHVYPRAQGDGHGQ
SFPAGVAAWGPQTGPGQGRPPFQQQQVSAQAPSHQQHDPSGPQDHGHRMGPYMGRSDYAT
MQGHPGQTQTPPRINHFPPGMGKEPNHYMGHVGLQQNSSMTGHPAQQQQFLHQPGQGPVH
TQDRMASHTSHQQHQGLAGRPHQNMGFNMHGQAASPGAVTSSGPYPPYPQYSNHNQGLAG
SAGMSPGMSLSSTSNNNSSASGPMGPAQVQCYPNAGGAPQRYPGPQVHQQPVHPNQITSQ
PMHPSQAQATPHKQPHLPTPPHGSYGSPTSMSPMKGMGTTTVTPPPQQVRPPSAGLAPEV
GLYPGVPLQAPNPMAPQRNTTPLGVQQPQHHPQHLSHPQQHPHMPPSQQLYPGMSPNQRG
PLDQVRPPGPMAHGEPPGPQDQRLLPPQQQAPKSGQQPPPVAFQQQVHPAQTALPSSQAQ
THLAGPHHQSSPPNQPPWAPAGHQSPPTPQKVPHIQYSTSSEMTASDRTPASGANLQPAN
RDKKPTEQKPKKKKAKVMVEERVEGKKKPKKKKGGCIEECGEEGKRKVGDGPWAEVNCLT
GALEESLVVKTKKKPKEPKEPKTPKEPKEKAKSTTPKAKMPKKPRSTNKVESAEGSGSSV
KETKRKREPPVSSDVEKSPSGPSDEDDDDDSVQKRRSSRQVKRKRYTEELELRISDDGDV
SPAPKSPFNNSEQQEVETEGPVVEKILSIRMGKKEMESGEKMEVEEFYVKFKSFSYLHCR
WADLEELEKDKRIHQKVKRFRAKQALPTFVTEMDDEPFNPDYVEVDRVLDVSESTDENGE
PVKLYLVKWCSLPYEDITWELKADIDQAKIDEYEAVAARQPETKRVERPPTENWQKSESS
RDYINDNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPF
LVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQAYEMNYRDVQGRVIKGAYKFHA
VITTFEMILTDCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQN
TVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLA
PKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGGGAWGGGGAQVPNLLNTMMELR
KCCNHPYLINGAEEKILDDFRENHHAEMPQFHLQAMIQAAGKLVLIDKLLPKLKAGGHRV
LVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAG
GLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKAS
LKLGLDKAVLQSMSGRENAANGVPQLSKKEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQ
ILLRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKAELDMEAINGRN
TLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKPLTKPRRPQDRAHGYPRSECFR
VEKNLLVYGWGRWGDILSRGRFKRPLQEQDVETICRALLAYCLLHYRGDENIKCFIWDLI
TPSEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAPPAPPQLPRAEWLASCNPDLLLQEDSY
KRHLKHHCNKVLLRVRMLYYLRQEVIGDHADRILEGTDSSEMDIWIPQPFHAEVPADWWD
SKADKSLLIGVFKHGYEKYNSMRADPALWFLERVGMPDAKAIAAEQRGADMMADGPEGED
EDPEYKPLRMTFKDEMEDFANSPLDDKEETVDVESGESKPGENVAGSRGAGRLYWPAASA
LTARLRRLITAYQRTHKREQLRQEAMARPDGRRRRQPREHLFSMVTDGGAYVQEDGAFMA
EGNPYMATGAAFMPETTGLLAEGGAAFKERRQRWTRREESDFYRVVSTFGVIYDTDRQRF
DWTQFRAFARLDKKSDESLEKYYFSFVAMCKRVCRMQVKANTELPDPTLIIDPITEERAS
RTLYRIELLRRIREQVLPNPLLGERLRLCQPSSDLPEWWDCGRHDYDLLLGASKHGVSRT
DYHILNDPALGFLEAHRKFTKGGLAGVPQPPRDGVLSTASSSSTEQATATAGAEKSLPVQ
EDEEGKEMKEEGNDIPCTKPEKPDEGKEEEMEAKKEEKAGSPKKAKEEEKAGSPKKVKEE
EKAGSPKKVKEEEKAGSPKKVKEEEKAGSPKKAKEEEKAGSPKKAKKEEKAGSPKKAKEE
EKAGSPKKAKEEEKAGSPKKVKEEEKGEEDDKEEEMEVNGDADGDTSKEAKPEKGYKATT
EETKDQDKKLDFQEKPESPKASEEQGTKKQERDEKEGSPAKSPKPVAEKGPDEEKMEEDD
KSEKSSQAEAGATSEQKNFDEESNASLSTTARDETRDGFCPEDGEPSAIPALQERITSSF
WPKDRIMINRMDNICDAVIKGKWPANRRQFFDFPGLLPGYPGPMTSESPMTRQSLAELSM
AAAAQTSFSGSEDLTLSPQANEDALSISLPKQRRRRRRKVEIEAERAAKRRNLMDMVAQL
RESHAAESQSQAMDLTKGILHQHHKSSAPSPASYSSSMVSPAALKAQMELLQPATPSRHR
ANCSLAEADLPTRRRRGRRKNVEGLELLFMRGATEDSERTKASVEGLQMPPRSHRHNIPS
TSACVPSVSAMEDREAGTPSNKDLSDWLRQHPTYTMDMPTAYTPKSEETLLSSQFPKPKQ
KRHRCRNPNKIDINTLTGEEKVPVINRRNGRKMGGAMAPPMKDLPRWLLENSDFAVAPDW
TDIVKQSGFLPEAMFDRLLTGPLVREEGVRRRGRRPKSEITKAAAAQAASSGGLNPLLIN
GLFGGMDLTSLQGLQSLQSLQLQLMGFPGMGGADAKHASAMLPLMLPGMAGMGGLPNMFG
LGGLFASNLAAATPAAASNGTNDEGDSDETSKRDAREGGQEQDEEKDDTGEEAESSKANG
EAAALNVAAAAMAASGMSAPSLAFNPFLLSTMAPGLFSPYMFLSPGLGALTLPGFPPTAL
ADLQSAMAGAMGVASGAQGQEKEPGQVAATADLETADDSDSAESLEKTAESSALEDEASA
LAEEADSPEDLEAEEEGEEALKEEEKSD
NT seq
9627 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccggggatgttgagcctgttcggggatgatgccaacctgttctcggacggg
ctggagggccttggggactgtggcttcccccagggccagcccaaccctgtaggacagcag
gagcaccaggactacgggtcgctctcctccaactcactacaccacccctcgcaggccgtc
cccggaaagcccaagatgggtcacccctacgacccctttgcaggctacgagcagcagcag
gacaacggccccaccgtcaacagcatggtgaccccgcactcacgctaccacaacagcccc
caacaacccggaggggggcaccatgtctaccccagagcccaaggcgatgggcacgggcag
tccttccctgccggagtagccgcgtggggcccccagactggccccgggcagggcaggcct
ccattccagcagcaacaggtatccgcccaggccccatcccaccagcagcacgacccctca
gggccccaggaccacggccaccgtatgggcccctacatgggccggtccgactacgccact
atgcagggccaccctggccagacccagacgccacccaggatcaaccacttccctccgggc
atgggcaaggagcccaaccactacatgggccacgtggggctccagcagaactccagcatg
acgggtcacccggcacagcaacagcagtttcttcaccagcccggccagggccctgttcac
acccaggaccgcatggcctcccacacctctcaccagcagcaccagggcttggccgggagg
ccacaccagaacatggggttcaacatgcacggccaggcagcctctcctggtgctgtaacc
agctcagggccgtaccccccctacccccagtacagcaaccataatcagggattagccggc
agtgcagggatgagtcccggcatgagcctcagcagcaccagtaacaacaacagtagcgcc
agcgggccaatggggccagcacaagtccagtgttaccccaacgcagggggggccccacag
cgctacccgggtcctcaggtacaccagcagcctgtccacccaaaccaaatcaccagccag
cccatgcacccctcccaggcccaggccaccccccataagcagccccacctccccacacca
cctcatggatcttacggctctcccacctccatgtcccccatgaagggcatgggaaccacc
acggtcacacctccgcctcaacaggtccgaccccctagtgcaggtcttgctcccgaggta
gggttgtaccccggagtgccactccaggcccctaaccccatggcccctcagagaaacacc
actcccctgggcgtgcagcaaccgcaacatcatccccagcacctctcccaccctcagcag
cacccccacatgcccccgagccagcagctctacccgggtatgtcccccaaccagagaggc
cctctcgaccaggtgagacctccaggtcctatggcccacggtgagcctccaggaccacag
gaccagcggctgctccctccccagcaacaggctcccaaatctgggcagcagcctcctccc
gtggccttccagcagcaggtgcacccagcccagactgctttgccctcgtcacaggctcag
acacatctggccggcccccaccaccagagctccccgcccaaccagccaccttgggcgccg
gcaggacaccagtcgcctccaaccccccagaaagtgcctcacattcagtattctacgtca
tctgagatgacagcttctgacaggacacccgcttcgggggcaaacctccagccagccaac
cgtgacaagaagcccactgagcagaaaccaaaaaagaagaaagcaaaggtgatggtggag
gaaagagtagaggggaaaaagaaaccaaaaaagaagaaaggaggatgtatagaggaatgt
ggcgaggaggggaaacgaaaggtcggggacggtccctgggcggaggttaactgtctgaca
ggtgccctggaggaatcgcttgtggtgaagacaaagaagaaaccgaaggagcctaaagag
cccaagactcccaaagagcccaaggagaaggccaagagcactacccccaaggccaagatg
cccaagaagcccagaagcactaataaggtggagtcagcggagggcagtggcagcagtgtg
aaggagactaagaggaagagggagcccccggtcagctccgatgtggagaagtcaccctca
ggcccctccgatgaggacgacgacgacgacagtgtccagaagcggcgttccagtcgtcag
gtgaagaggaagcgctatacagaggaactggagttgaggatttcagacgatggagatgtt
tcccccgctcccaagtcgcccttcaacaactctgaacagcaggaggtggagacagagggg
cctgtggtggagaagatcctgtctatacgcatggggaagaaagagatggaatcgggagag
aaaatggaagtggaagaattctatgtgaaattcaagagcttctcctacctgcactgtcgc
tgggcagatctggaggagctggagaaggacaaaaggatccaccagaaggtcaagcggttc
agggccaagcaggccctccccaccttcgtgacagagatggatgacgagcctttcaaccca
gactacgttgaggtggaccgggtactggacgtgtcagagagcacagatgagaacggagag
cctgtaaagctgtacctggtgaagtggtgttccctgccctatgaggatataacttgggag
ctgaaggccgacatcgaccaggccaagatcgatgagtacgaggccgtggcggcccgtcag
cccgagaccaaacgcgtggagcgacctcccaccgaaaactggcagaaatccgagagttcc
agggattatataaacgacaacgcactcagggaataccagctggagggagtgaactggttg
ctcttcaactggtacaatacacggaactgcatcctagcagatgaaatgggcctgggcaag
accatccagtccatcacattcctctatgagatctacttgaaggggatccacgggcccttc
ctggtcatcgcccccctctccaccattccaaactgggagcgggagttccgcacgtggacc
gagctcaacgtgatcgtctaccacggcagccaggccagccgcaagaccatccaggcctac
gaaatgaactaccgcgacgtgcagggtcgtgtgataaagggagcgtacaaattccatgcg
gtcatcaccacatttgagatgattcttacagactgtccggagctgcgcagcgtcccatgg
cgctgtgtggtcatcgacgaggctcaccgcctcaagaacaggaactgcaaactgctggag
ggtctcaagatgatggacatggagcacaaggtgctgctgaccgggacgcccctgcagaac
acggtggaggagctcttcagtctgctcaacttcctggaaccggaacgcttcccctcggag
aacaccttcatgcaggagtttggagacctcaagactgaggagcaggtccagaagctgcag
gccatcctgaagcccatgatgctgcgacgtctcaaggaggacgtggagaagaacctggct
cccaaggaggagaccatcattgaggtggagctgaccaacatccagaagaagtactacagg
gccatcctggagaagaacttctcctttctgtctaaaggaggaccgggaggaggaggtggc
gcatggggaggcggaggtgcacaggtccccaacctgctcaacaccatgatggagctgagg
aagtgctgcaaccacccctacctcatcaatggtgcagaggagaagatcctggacgacttc
cgtgagaaccaccatgccgagatgccccaattccacctacaggccatgatccaggcagcg
ggcaagctggtgctgatcgacaagctgctgcccaagctgaaggccgggggacacagggtc
ctcgtcttctcccagatggtgcgctgcctggacatcctggaggactacctcatccagaaa
cggtacccgtatgagcgtatcgatggccgtgtgaggggtaacctccggcaggctgcgatt
gaccgcttctctcgtccggactctgaccgctttgtcttcctgctgtgtacccgggctgga
ggcctgggcatcaacctgaccgctgccgacacctgcatcatctttgactcggattggaac
ccccagaatgacttacaggcgcaagccagatgccacaggattggccagagcaaggcagtg
aagatctacaggctgatcaccaggaactcctatgagagggagatgtttgacaaggccagc
ctcaagctgggcctcgacaaggctgtgctgcagtccatgagtggccgagaaaacgcagcc
aacggggttccacagctgtctaagaaggaggtggaggacctcctccgtaaaggagcctac
ggagctctgatggacgaggaggacgagggctcgaagttctgcgaagaggacattgaccag
atcctcctgagacgaacccagaccatcaccattgagtccgagggcaaggggtccaccttt
gccaaggcgagttttgtggctgctgggaacaggacggacatttccctggaggacccggac
ttctggcagaagtgggccaagaaggcagagctcgacatggaagccatcaatggacgaaac
acccttgtgatcgacactccgagggtgcggaagcagacacgccactacagctcgatgaag
gaggacgaattggccgagttctccgagctggaaagtgacggcgagaacgagaagcccttg
accaaacccaggcggccccaggaccgagctcacgggtacccccgcagcgaatgcttcagg
gtggagaagaacctgctggtttatgggtggggtcgctggggagacatcctgtcccgtggg
cgtttcaagcggcccctgcaggagcaagacgtggagaccatctgccgcgccctgctggcc
tactgcctgctgcactaccgtggcgacgagaacatcaagtgcttcatctgggacctcatc
acgccatctgaggacggacagagccgcacactcaccaaccactccggtctgtctactcca
gtaccgcggggtcgtaaggggaagaaggggaaaccagccccgcctgcccccccccagctc
cccagggcagagtggctggccagctgtaaccctgacctgctactgcaggaggacagctac
aagagacacctcaaacaccactgtaacaaagttctactgagggtccgtatgctctactat
ctgcgacaggaagtcatcggtgaccacgccgacaggatcctagagggaacagactcaagt
gaaatggatatctggatcccgcagcctttccacgccgaggtgcccgccgattggtgggac
agcaaggcagacaaatcgctgctcatcggtgtcttcaaacacggctatgagaagtataac
tcgatgcgtgccgaccctgcgctgtggttcttggagcgggtgggcatgcccgacgccaag
gccatcgccgcagagcagaggggggcggacatgatggcagatggtccggagggagaggat
gaagacccagagtacaagcctctccgcatgacctttaaagatgagatggaggacttcgcg
aactcacccctggatgacaaagaggagactgtcgacgttgagagtggtgaatctaaacca
ggtgagaatgtagcaggcagcagaggggcgggtcgtctgtactggccggcggcctcggcc
ctcaccgctagactccgccgcctcatcacggcctaccagcgcacgcacaagagggagcag
ctccgccaggaagccatggcccggcccgacggacgccgccgccgccagccccgagaacat
ctcttctccatggtcacagatggaggggcctacgtgcaggaggacggagcattcatggca
gagggaaatccttatatggccacgggcgccgcttttatgcctgagacgacggggctcctg
gcggaaggaggggccgccttcaaagagaggcgtcagaggtggaccaggcgtgaggaatca
gacttctaccgggttgtgtccacgtttggtgtgatctatgacacggaccgccagcgcttt
gactggacccagttcagggccttcgcccggctggacaagaagagtgacgagagcctggag
aaatactacttctccttcgtggccatgtgcaagcgggtgtgtcgcatgcaggtcaaggcc
aacacagagctcccagaccctaccctgatcatcgaccccatcacggaggagcgcgcctca
cgcaccctctaccgcattgagctgctgcgtcgcattcgcgagcaggtgctgcccaacccc
ctgctaggtgagcgcctgcgcctctgccagcctagctctgacctgccggagtggtgggac
tgcggccggcacgactacgacctcctcctgggcgcctccaagcacggcgtgagtcgcact
gactaccacatcctcaacgaccctgcgttgggcttcctggaggcccacaggaagttcacc
aaggggggattggctggggtgcctcagccgccccgcgatggagttctctctactgcttct
tcctcttccactgagcaggccacagctactgctggtgctgagaaatccttacctgtccaa
gaggacgaagaagggaaggagatgaaagaggaaggtaacgacattccatgtactaaacct
gagaaaccagacgaaggcaaggaagaagagatggaggcgaagaaggaagagaaggccggg
tctcccaagaaggcgaaggaggaagagaaggccgggtctcccaagaaggtgaaggaggaa
gagaaggccgggtctcccaagaaggtgaaggaggaagagaaggccgggtctcccaagaag
gtgaaggaggaagagaaggccgggtctcccaagaaggcaaaggaggaagagaaggccggg
tctcccaagaaggcgaagaaggaagagaaggccgggtctcccaagaaggcgaaggaggaa
gagaaggccgggtctcccaagaaggcgaaggaggaagagaaggccgggtctcccaagaag
gtgaaggaggaagagaagggagaggaggatgacaaagaggaggaaatggaggtcaacggc
gacgctgacggagatacttccaaggaggccaaacccgagaaggggtacaaagctaccact
gaggagaccaaggaccaggacaaaaagctggacttccaggagaaaccagagtctcctaaa
gcatcagaagagcagggaaccaagaaacaagagagagatgagaaagaaggaagccctgcc
aagtctcctaaaccagtggctgagaaagggcccgatgaggagaagatggaggaagacgac
aagtctgagaagtcctctcaagctgaagcgggcgccacctcagagcagaagaactttgac
gaggagagcaacgcctcactgagcaccacggccagagacgagacccgcgacgggttctgc
cccgaggacggagagccctctgccatcccggccctccaggagagaatcacctcatccttc
tggcccaaggaccgcatcatgatcaatcgcatggacaacatctgcgatgcggtcatcaag
ggcaagtggcccgccaaccgacgccagttcttcgacttcccgggcctgttgcctggatac
cccggccccatgacgtctgaaagccccatgacgaggcagagcctggccgaactgtcgatg
gcagcggccgctcagaccagcttcagtggcagcgaggacctcaccctctcgccccaggct
aatgaggatgctctgagcatatcattgccgaagcagcgtcgtcgcaggcggaggaaggtg
gagatagaggcagagcgtgcggccaagcgcaggaacctgatggatatggtggcccagctc
agagagtctcacgctgcagagtcccagagccaggccatggatcttaccaagggtattctg
caccagcaccacaagtcttcagcgccctccccggcgagctactccagcagcatggtgtca
cctgctgccctcaaggcacagatggagcttctgcagccggccacaccctccagacacagg
gccaactgctcattggccgaggctgacctgcccaccaggaggaggcggggccgcaggaaa
aatgtggaggggctggagctgctgttcatgagaggagccacggaggattcagagaggacc
aaagcttcagtggaggggttgcagatgcccccacgttcccaccgccacaacattcccagc
acctccgcctgtgtcccctctgtcagcgctatggaggacagggaggctggtaccccctct
aacaaagacctgagtgactggctcagacagcaccccacatacaccatggacatgcctact
gcgtacacaccaaagagtgaggagacgctcctctcctcccagttccccaaacccaagcaa
aagagacaccgctgccggaaccccaacaagatcgacatcaacacgctcaccggagaagag
aaggttcccgtgatcaaccggagaaacggaagaaagatgggtggtgccatggcccctccc
atgaaggatcttcccagatggctcctggagaactcagattttgccgtcgctccagactgg
actgacattgtcaagcaatcgggcttcctccctgaggccatgttcgaccgtctcctgact
gggcccttggtgcgtgaggagggtgtccgtcgtcggggaagacgtcccaaatcggagatc
accaaggcagcagcggcccaggctgcatcctctgggggccttaaccccctgctgataaac
ggcctgtttggaggcatggacctcaccagcttgcagggcctacagagcctccagagtctg
cagctgcagctcatgggcttccccggcatggggggggctgacgctaaacacgcctcggcc
atgctgcctctcatgctgcctggcatggctggtatgggcggtctgcccaacatgtttggc
ctgggaggcctgttcgcaagcaacctggctgcagccacgcctgctgcagcttccaacggc
accaacgacgagggcgattcggacgagacatcgaagagagacgccagggagggtggacaa
gagcaggatgaggagaaggacgacactggggaggaggcagagtcgagcaaggctaatggg
gaggccgcggctctgaatgtggctgctgccgctatggccgcctccggcatgtcagctccc
tcactggccttcaatcccttcctgctctccaccatggccccggggctcttttccccctac
atgttcctgtcccctggcctgggagctctcaccctgcctggcttcccccccactgccctg
gccgacctgcagagtgccatggctggagccatgggggttgcctctggagctcagggccag
gagaaggagcccggccaggttgccgctaccgcagacctagagactgctgatgacagtgac
tcagctgagagcctggagaagactgcagagtcgtctgcgctagaagatgaggcctcagca
ttagcagaggaagccgactcaccggaagacctggaggccgaggaggaaggagaggaagcc
cttaaggaggaagagaagagtgactga
DBGET
integrated database retrieval system
