Salvelinus fontinalis (brook trout): 129823959
Help
Entry
129823959 CDS
T11136
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129823959
03012 Translation factors [BR:
sfon03012
]
129823959
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129823959
mRNA cycle factors
Stress granule specific factors
129823959
Translation factors [BR:
sfon03012
]
Eukaryotic type
Initiation factors
eIF-4
129823959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
129823959
NCBI-ProteinID:
XP_055739081
LinkDB
All DBs
Position
26:23353113..23413149
Genome browser
AA seq
1809 aa
AA seq
DB search
MKALFCQSILQVRLASQRHPDAEPREMNKPPQPITGPTSVPHPSPSPGLTQLCFSASPLS
QAAYASGQPTSLVFATQTPQQMNSAPQPRQFATGPRALHQQGGYRALQPYYANRPNMPTS
VPRVQTSSGPRPVGPTHIYQPGSQMMMIPGQQLSFAGSPQGYFIPPGQYRAPYMPPSPQY
PVTSGTAGFYPGTSPAEYPTYEPSLAARERRGGGRENVRLSLHGAPLTSQRYPAGAYYPA
QPQYSHTPPVQTTPVMISPAQPQQQALPPQLPPTQPPAPKRERVTIRIRDPNQGGRDITE
EIMSGGRATSTPTPPSQYSSTEEEGPAQTNGEFTKPVTIVTRTDEIAELAICTVTAAETL
PPVLSTPEPATAAVPLEAKQETDGQVAPLTEQVVSESDAPLAGMRPEVPIPQREDQAPAS
SPLTASTSPPPAEVQTPPPATTMAQASHAVGAGMTPAVKAVTPEGPSTQVEPLDAPASVE
KPLAQAAEEVVVEEKVEKVKNEPAITINPEVVVAVVVIKEDTEPAPRPLTPTSDFAPSLK
LAAAVEAATKTESVVLPPAPKQKAMTEPVSAPAHAVTPSVPEAEPVVAQKKVEQLPLSNG
LPQEDPDEVDAPVAALERIATAITEPATPPPQETANPAAAAVEQVEEKKEEEEEQKEEDA
SPVPLSSSPSEDSSMQAAVSVPKKKRNMKELNKKEAIGDMLDAFKEEEAAPATEPSSSPA
EPSPVAPTSLPPADAPDETWEEKEDKQNADTPPLKPGDLKYQYKGEQWKPIDPEEKKRYD
REFLLGCQFISASMNKPEGLPLITDVVLDKANKTPMRPAEPGRNMNAGPDFTPAFMGNLG
RQSSGGGGPRGPGRDHMGPPGPRRSQQGQRKEPRKIITISSSLGGEVELNKAEKAWKPTV
KKAVTRGRGAAPEDEESDDPEEAKTQELFKRVRSILNKLTPQMFQQLMKQVTELSIDTEE
RLKGVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKPGVTVNFRKLLLNRCQKEFE
KDQDDDIIFEAKQKEMEAAKEEEKAGLKAMLEEAKDEARRRSLGNIKFIGELFKLKMLTE
AIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFAQMDKIIKEKKTSS
RIRFMLQDVIDLRRSGWVPRRGEQGPKTIDQIHKEAEQEEQMQQIKVQQQLMSRNDGGGR
GGGGGRDGRGGDRGGRDQGGRGGQQVGRGSQPQDEGWNTVPISTKNRPIDTSRLSKITKP
GALDFSNQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAAGAEPAAETGRPATGNRFSALQQ
SAPPASSSDADRRVPQRSSSSRDRDRFDRFERHDSSREERAGSRDARPPITKRSFSRETE
ERRGDSCTPTEPPVRRVASMTDDRDRGGSRSRGGSGSRDRALSKEVVVKRETAPTPPPNA
PTKPAMTEEELEKKSSAIIEEYLHLNDMKEALQCVVELNSAPLLFVFVRNGLENTLERSA
IARERMGLLLHQLIKAGTLPTTEYYKGLQEILEVAEDMAIDIPHIWQYLSELINPMLHEG
GIPMGQLFREISKPLIPLRKAGVLLVHILNLLCKEMTHKKVGGMWTEAGLNWRDFLPEDE
DVNKFVTEQKIEFTLGEKSDGTNQKKPMSGEELSKQLDRLIQDKANNQRIRDWVEANLDE
QQTSDNQFVRTLMTSICQSAVICENPYKVDVEQITQRAKLLQRYLSDEKKELQALYALQA
LMVHMEQPANLLRMFFDTLYDEDVIKEEAFYRWESSKNPAEQTGKGVALKSVTAFFTWLR
DAEEESDKD
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccctgttctgtcagtccattttacaagttcggctggcaagtcagcgccaccct
gatgcagaaccacgtgaaatgaacaaaccaccgcagcctataacgggacccacctctgtc
ccacacccctccccctcccctggcctgacacagttgtgtttctctgcctcccctctttcc
caggctgcctatgcctctggacagcccacttctctcgtcttcgccacccaaacacctcaa
caaatgaattctgcaccgcagccacgacagtttgccaccgggccccgtgctttacaccaa
cagggtggatacagggcactgcagccttactatgccaacaggcccaacatgcccaccagt
gtcccccgggtccagaccagcagcgggcctcgtccggttggtcccacccacatctaccag
cccggctcccagatgatgatgatccctggtcagcagctgtcctttgcaggctcccctcag
ggctacttcatcccccctggacagtaccgggctccctacatgccaccaagtccacagtac
cctgtgacaagtgggacagcaggcttctacccaggcaccagcccggctgaataccccacc
tatgagccctctctggctgcgagggagaggagagggggcgggcgagagaacgtgcgtctc
tctctccacggtgctcctctcacctcccagcgctaccccgcaggtgcctactacccggcc
cagccccagtacagccacacaccccctgtccagaccacgcccgtcatgataagccctgcc
cagccccagcagcaggccttgccccctcagctgccgccgacccaaccaccggcacccaag
agggagcgcgtaacgatcagaatacgagaccccaaccaggggggccgtgatatcacagag
gagataatgtccgggggaagggccacctcaacccccacccccccttcacagtactcctcc
acagaggaagaaggtcctgctcagaccaacggagaatttactaaacctgtcaccatcgtg
acgagaacagatgaaattgcggaacttgcaatttgcacagtgacggccgccgaaaccctg
cctccagtgttgtcaactccagagcctgccactgcagctgtcccactggaggccaaacag
gaaaccgatggccaggttgccccgcttaccgaacaggtcgtcagcgaatcagatgcccct
ttggcggggatgaggcccgaggtgcccatcccacaaagggaagaccaggcccctgcctcc
tcccccctgacagcttctacctcccctccccctgcagaggtacagactccaccccctgcc
accaccatggctcaggccagccacgcagtgggcgctggtatgacccccgcggtgaaggca
gtgacccccgaaggtccttccacacaggtagagcctctggatgcaccagcatctgtggag
aagcctcttgctcaggcagcggaggaagtagtggtggaggagaaggtagaaaaggtcaag
aatgagccagcaattaccatcaatccagaggtagtagtggctgttgtggtcattaaagaa
gacactgaacccgctccacgacctctgaccccgacatctgattttgccccgtccttgaag
ttggcggcggctgtggaagcggctactaaaactgagagcgtggtgttgccgccagcgcct
aaacagaaagccatgaccgagcccgtttctgcccctgctcatgccgtcactccctctgtc
ccggaggcagagcctgtcgtggcccaaaagaaggtggagcagctgcccctgtccaacggc
ctcccccaggaggaccccgacgaggtagacgcccccgtggctgcactagagcgcattgca
acggcaatcacagagcctgccactcccccacctcaggaaactgctaaccctgctgctgct
gccgtagagcaggtggaggagaagaaagaagaagaggaggagcagaaagaggaggatgca
tccccagtgcccttgtccagcagcccttcagaggactcgtctatgcaagctgctgtgtct
gtgccaaagaagaagaggaatatgaaggagctgaacaagaaggaagccatcggagacatg
ctggatgccttcaaagaggaggaggcggcacctgccaccgagccctcgtcttcaccggca
gagcccagccctgtggccccgacctccttgccgcccgccgacgcgccagacgagacgtgg
gaagagaaggaggacaagcagaacgccgacacacccccgctcaaaccgggcgacctcaag
taccagtacaaaggagagcaatggaagcctatcgacccagaggagaagaagaggtacgac
agggagttcctgctgggttgccagttcattagtgccagcatgaacaagcctgagggcctg
cctctcatcaccgatgttgtgctagataaggcgaataagacccccatgcgcccagcagag
ccgggtcgcaacatgaacgccgggccagacttcacccccgccttcatgggtaacctgggt
agacagtcctctgggggagggggaccacggggccctggaagggaccacatgggacccccc
ggaccacggcgctcccagcagggccagcgcaaggagccccgcaagatcatcacaatctcc
tcatcgctaggtggcgaagtggagctcaacaaggcggagaaggcatggaagcccacagtg
aagaaggctgtgacccggggccgaggcgccgcccccgaggatgaggagagcgacgacccc
gaggaggccaagacccaggagctgttcaagagggtccgctccatcctcaacaagctgacc
cctcagatgttccagcaactgatgaaacaggtcacagagctgtccatcgatacggaggag
cggctgaagggagtgatcgacctgatctttgagaaggccatctccgagcccaacttctct
gtggcctacgcaaacatgtgccgctgccttatggggttgaaagtgcccaccacagacaag
ccgggagtgactgtaaacttccgcaagctgctgctcaaccgctgtcagaaagagtttgag
aaggaccaggatgatgacatcatctttgaggccaaacagaaggagatggaggctgccaaa
gaggaggagaaagctggtctgaaggcgatgctggaggaggccaaagacgaggcgcggcgc
cggtcgctgggcaacatcaagttcatcggcgagctgttcaagctgaagatgctgacagag
gccatcatgcacgactgcatcgtcaagctgctgaagaaccacgacgaggagtctctggag
tgcctctgtagactgctgtccaccatcggcaaggacctggactttgagaaagccaagccc
cgtatggaccagtactttgcccagatggacaagatcatcaaggagaagaaaacctcgtct
aggatccgcttcatgctgcaggacgtcatcgacctcagacggagtggctgggtcccccgg
cggggggagcagggccctaagacaattgaccagatccacaaggaggctgagcaggaggaa
caaatgcagcagatcaaggttcagcagcagctcatgtcaaggaacgatggaggaggacga
ggaggtggagggggaagagacgggagggggggagacagaggaggaagggatcaggggggc
cgcgggggccagcaggtgggaagggggagccagccccaagacgagggctggaacacagtg
cccatctccaccaagaacagacccatcgataccagccggctcagtaagatcaccaagcct
ggtgctctggacttcagcaaccagctccttgctccccaactcgggggtaagggcatgtgg
ggcagctggggcaagggcagcagtggaggcaccacaggagccaagcctgccgccggagct
gaaccagcagcggagactggccgtccggccaccggcaaccgtttctctgccctgcagcag
tctgctccaccagcatcctcctcagacgctgaccgcagggtaccccagaggtccagctcc
agtcgtgaccgggacaggtttgaccgcttcgagcggcacgacagcagtcgtgaggagcgt
gcaggcagtcgcgacgcccgcccccctatcactaagcgcagcttcagccgtgagacagag
gagcgtaggggcgatagttgcacccctacggaaccccccgtccggcgcgtagccagcatg
acagacgacagagaccggggaggcagccgtagccggggaggcagcggtagccgggacagg
gctctcagcaaggaggttgttgtgaagcgcgagacagcccccacccctccccccaatgct
ccgaccaaaccggccatgaccgaggaggagctggagaagaagtccagcgccatcatcgag
gagtacctccacctcaacgacatgaaggaggcactgcagtgtgtagtggagcttaacagc
gccccgctgctctttgtgtttgtgcggaacggtctggagaacactctggagcgcagcgcc
atcgccagagaacgcatgggcctgctgctgcaccagctcatcaaggctggcaccctgccc
acgacagagtactacaaagggctccaagagatcctggaggtggctgaggacatggccata
gacatcccccacatctggcaatacctgtctgagctcatcaaccccatgctccacgaggga
ggcatccccatgggacagcttttcagagagatctccaagcccctgattcccctgcgtaag
gccggtgtgctgctggtgcacatcctcaacttactctgcaaagaaatgacccataagaag
gtgggcggtatgtggacggaggcggggctcaactggagagacttcctgccagaggacgag
gatgtcaacaagtttgtgactgaacagaaaattgagtttaccctgggggagaagtcagac
gggaccaatcagaagaagcccatgagtggggaggagcttagcaaacagcttgacagactg
atccaggacaaggctaacaaccagcgcatcagagactgggttgaggccaacctggacgaa
cagcagacgtcggacaaccagtttgtgcgcactctgatgacatccatttgccagtcagcc
gttatatgtgaaaacccatacaaggtggatgtggagcagattacccagagggcaaagctg
ctgcagcggtacctgagtgacgagaagaaggaactgcaggccctctatgccctccaggcc
ctcatggtgcacatggagcaaccggccaatctgctgcggatgttctttgacacgctttac
gatgaggacgtgatcaaagaggaggccttttacaggtgggagtccagcaaaaacccagcc
gagcagactggaaagggtgtggccctcaagtcggtcaccgccttcttcacctggctccgt
gatgccgaagaagagtccgacaaagactaa
DBGET
integrated database retrieval system
