Salvelinus fontinalis (brook trout): 129824002
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Entry
129824002 CDS
T11136
Name
(RefSeq) laminin subunit gamma-2-like
KO
K06246
laminin, gamma 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04382
Cornified envelope formation
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129824002
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129824002
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129824002
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
CAP_N-CM
RPN11_C
Motif
Other DBs
NCBI-GeneID:
129824002
NCBI-ProteinID:
XP_055739218
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All DBs
Position
26:complement(25460210..25473050)
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AA seq
1150 aa
AA seq
DB search
MRILIYLIPIRFSVTMKSSWIFLCGLSLCTWSSIQGTYRYGGSDICKCNGKSRYCLPDSG
GLHCVDCQDNTEGRHCERCKEGFYHQRAGDSCLPCNCSPIGSVGAHCDSRGRCSCRAGAQ
GEKCDQCQNGTPISSNGCAANGGQLTDNSVTAQSLPCFCYGHSTECSTAKGYSVHTITST
FDDGPEGWRAATVHGVTPSQVHFRWSPTHHDIEVISKDILPVYLYAPDSYLGNQELSYGQ
NLSFSLRLDRGVRHPSMADVVLEGSGLSVAASLGDLRTIVPSGQKITYTFRLNEQQGSEW
RPHLSSFQFQTLLHNLTDIKIRGTFGENGRGYLDDVHMQSARRGAGSPAAWIQKCTCPVG
YEGQFCEKCAAGYKRSSPSKGPYSSCEPCSCRGGSCDSETGDCYSADETPGRQTCPPGYY
NDPAQPQSCLKCPCPNGGACSVSPGSLEIKCDLCLPGTTGSRCHTCQDGFYGDPLGEDGI
QRPCRRCQCNGHMEPNTVRSCDPQTGECLKCLKHTTGFFCESCLEGYHHSIPSEACKPCG
CNSQGSLYNKCSDQGQCSCREGFEGLKCQRSECPSCFNLVKTEMEGYSRKLREIETLFTG
MESGSLPVNDAQMEKAIRTAEDIVTDLQRNAHTLSESEKDLQARLSDISATQLSEGRDIQ
AISNTVDNIKLQDQKYQRQVSDVQTLISDVRRKLEEARFNIKQAEFPLGDAEAGTYTLSS
LVQRATDLAEKHQSKSGTVEKTANGALAKSEKSLALMRSVMTGENKIKELVSDLKTKYDE
NSAQVKAMESLATRLSSSARDESRMATDTLEQIASLEPGIPRPLKKDIDRVLAKLDGLRE
RVEKNLTVYQALQEDTQEDKAAVEDLLAQGKAAQQKYDQLLDRANDAKADTELALKDITD
NIDGVDNVLEMLRGFDGQINKNKALADEAIKKLPGINATIHQAVGNNSETLFIIGNVSGD
YNDALGTVSSLEAVVSRLERMSGSLPVPPAGLLKDATKLKEDVQGLQKQAVATVAQVAAE
RANAEIQKDRAAEASMGATVAYNNAKHTRDAVGETLLVINNLLSMIGKPGSVDEERLGEL
EQSITSARGQVNLQLQPRLQDLEEKEASQRTRLTGLNLDIDMILDDIRNLEDIHANIPKG
CFNSPPIERP
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttgatctacttaattcccattcgattttctgtgaccatgaagagcagttgg
atatttctgtgtggactttctctttgtacctggtcgtctatccaaggaacctacagatat
ggaggatcagacatctgtaaatgcaatggaaagtcacgttattgcttgcctgactctggg
ggcctccattgtgtggactgccaagacaacactgagggaaggcattgtgagaggtgcaag
gagggattctaccaccagagggcaggagacagttgtctgccgtgtaactgcagccctata
ggttctgtaggcgcacactgtgacagtagaggacgctgcagctgtagagcgggagcacag
ggggaaaaatgtgaccagtgtcagaatggaacacctatcagctcaaatggctgtgctgct
aatggtggccagctcactgacaactcagtgacagctcaatctctaccttgcttttgctat
gggcactcgactgagtgctccacagccaagggatactcagttcacacaatcacctcaacc
ttcgacgatgggccagaggggtggcgagctgccacagttcacggtgtgaccccgtctcaa
gtccacttccgctggtcccccactcatcatgacattgaggtcatctccaaagacatcctg
cctgtttacctctatgcccctgactcttacctgggcaaccaggagctgagctacggtcag
aacctgtccttctccctgaggctggaccgaggggttcgccatccgtccatggctgatgtg
gtgctggagggatctgggctgagcgtggcagcttccctgggagacctgaggaccatcgtt
cccagtggacagaagattacctacacattcagactgaatgagcaacagggcagtgaatgg
aggccccacctttcatctttccagtttcaaacactcctccacaatctgactgacattaaa
atccgtgggacatttggagaaaatgggcgtggttaccttgacgacgtgcacatgcagtct
gcccgtcgaggtgccggttccccggctgcatggatacagaaatgtacctgcccagtggga
tatgagggccagttctgtgagaagtgtgctgcagggtataaaagaagttccccaagcaaa
ggtccatatagctcctgtgagccctgcagctgtagaggaggaagctgtgactctgaaaca
ggagactgttactctgcagatgagacccctggtcgccagacctgcccgccagggtattat
aatgatcctgcccagccacagtcttgtctgaagtgtccctgtcccaatggaggtgcctgc
tccgtaagcccaggttccctggagatcaagtgtgacctctgtctacctggcaccactggc
tcacgttgccacacctgccaggatggtttctatggcgatcccttgggtgaagatggcatc
cagaggccttgtcggcgctgccagtgcaacgggcacatggaaccgaacaccgtccgtagc
tgtgacccacagacaggggagtgcctgaaatgcctaaagcataccactggcttcttctgt
gaaagctgtctggagggctatcaccacagcataccatcagaggcatgcaaaccttgtggc
tgcaattctcagggctctctgtacaacaaatgcagtgaccagggccagtgttcttgcaga
gaaggctttgagggtctgaagtgccagcgttccgagtgtccctcctgcttcaaccttgtc
aagactgagatggaggggtatagtcgtaaactacgggagatagaaactctgtttacaggc
atggagagtggcagtctgccagttaatgacgcccagatggagaaagccatcagaacagca
gaggacatagtcacagacctgcagagaaatgcacacactctctctgaatcagagaaagac
ttacaggctcggctctcagacatcagtgcaacccagctgagtgaaggcagagacatccag
gcgatctccaacaccgttgacaacatcaagctgcaggaccagaagtaccaacgacaggta
tctgatgtccagacactcatcagcgatgtgcggcgcaaacttgaagaggcaagattcaac
atcaaacaagctgaattccccttaggtgatgcagaggcgggcacgtacaccctctcttct
ctggttcagagagcaacagacctggctgaaaaacatcaaagcaaatcagggacagtggag
aagacagcaaacggtgcccttgcaaagtcagagaagtccctggcactcatgagatcggtc
atgacaggggaaaacaagatcaaggagcttgtcagtgatctcaaaaccaagtatgatgag
aactcagcccaggtgaaggccatggagagcctggctactcgcctgagcagctctgcccga
gatgagagcaggatggcaactgacactctggagcagatagcctccctggagccgggaatc
cctcgtcctctcaagaaggacattgaccgtgtgttggctaaattggatggcctgagagaa
cgggtggagaagaacctaacagtgtaccaagcactgcaagaggacacacaggaggacaag
gccgcagtagaggatcttctggcccaggggaaggcagctcaacagaaatatgaccagctt
cttgacagagcaaatgatgcgaaggctgacacagaactggccctgaaggatatcacagat
aatattgatggggtggataatgtactggagatgctaagagggtttgatggccagatcaac
aagaacaaggcattggccgacgaggccataaagaaactccctggcatcaacgccaccatt
catcaagctgttggcaacaactcagagactctattcatcataggcaatgtgtctggagac
tacaatgatgcactgggcactgtcagcagcctggaagctgtggtctctcgactggagaga
atgtccggctctttaccagttcctcctgctggtctgttgaaggacgccaccaagctgaaa
gaggacgtgcagggtctgcagaagcaggcagtggccactgtggcccaagtggcagcagag
agggctaacgctgagatacagaaagacagagctgcagaggcttcaatgggagcaactgtc
gcttacaacaatgccaagcacaccagagacgctgtgggagaaacactcctggtcatcaat
aaccttctgagcatgatcggtaaacctggcagtgtggacgaggagaggctaggggagttg
gagcagtccatcaccagtgctcgtggccaggtcaacctacagctccagcctcgactgcag
gacctggaagagaaggaggccagccagaggaccaggttgactggcctaaacctagatatc
gatatgatcctggatgacatcaggaacttagaggacatacacgcgaacatccctaaaggc
tgcttcaactccccacctattgagagaccttaa
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