KEGG   Salvelinus fontinalis (brook trout): 129824018
Entry
129824018         CDS       T11136                                 
Name
(RefSeq) tenascin-R-like isoform X1
  KO
K06252  tenascin
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon04510  Focal adhesion
sfon04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129824018
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129824018
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sfon00536]
    129824018
Glycosaminoglycan binding proteins [BR:sfon00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   129824018
SSDB
Other DBs
NCBI-GeneID: 129824018
NCBI-ProteinID: XP_055739261
LinkDB
Position
26:26446366..26610210
AA seq 1369 aa
MGPARGWLLGLVLLLLGTQAALSPSGEEGKLVRTIRVRRQAPSDGPTSQSNNQTIKEQPM
VFNHVYNINVPLESLCSVDLDSAVPPPSQATRGAVSSGGGEGATEFTEQTVDADSQVTFT
HRINIPKQACACPTANIVQQLAIRIEMLEREVLLLRAQCSSGNCGCGESSSMGHLDFIPQ
CSGHGSFKMDLCGCVCEDSWTGKNCSEPRCPDDCSGQGVCMEGECVCDSDFGGDNCSEPR
CPADCSGRGLCMDGECICEENFTGEDCTLGRCLNDCSDQGLCTNGTCQCRPGYVGEDCSL
AYCANNCSQKGICKEGFCVCQDGFAGEDCSAVAPALNLRMRGVTEHTIDLEWEGSVLMTD
YLVTYVATSPGGVQLEIRIPGNTTSCSIPDLEPGIEYNINVYAVLNNVISAPTNTQVSTY
LSNPDGLLFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQLPSTITSFHQTGL
RPGEEYTVNLVALRDQGRSQPVSATVTTLIDGPTQLIVRDVSDSVAFVEWTNPKAKMDQI
VLRYGLVGGDRPKTTFRLQPTLSQYSLQMLRPGSRYEVSISGVRKGNESGTISTEFSTVL
VFLSEIDAPKNLRVLSKFSTTLELEWDNSEAEVEGYQVVYSTLAGDQYEKVIVPLNDGPT
SKTTLTNLLPGTEYGIGISAMLGTNQSSPATMNARTGLDVPMDLTVTASTDNTITLLWGV
VQGPIDHYMVTYTSSSGLTTEVTVPKDVTTTTLNDLEPGTEYTITVAAHRGRQQSTAATI
DGFTGSRPIIALYLSDVTWDSVTVAWSAPAPPADLYILTYSSEDGTDTSKVTLDGSKTRS
SIKGLLPSTEYTVSLITIHGEVKSEAVTATLTTGMDPPKEMTVSYATEDSVIISWLRPFA
PFDYYKMSYQSARGTVDSVVIDNDVTNYTLSSLHPATEYEINLNVVRGSQESKSITTSVF
TAMDMPMELTALNITPQGALLRWNPPLSSVDNYVFTLTCNQVTANTFLVEGVKQDHQLSK
LKPSTTYSVALYATKGPLTSGTVIANFETPMDAPLNLTASEVNHRSALISWQPPIADIDN
YMLTYKSVDGNRKELILDAEDTWIRLEGLAETTEYTVRLQAARGLETSGIVSTAFTTGNR
LFATPQNCAQHLLNGESLNGVYTIYINRDANQGVQVYCDMTTDEGGWIVFQRRQNGLTDF
SRKWSDYRVGFGNLEDEFWLGLDNIQKLSAQGRYELRIDMKDGQESVYASYDKFAIGDAR
NLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCALSYKGAWWYKNCHRANLNG
KYGESRHSQGINWYHWKGHEFSVPFVEMKMRPFNYRSISGKRRRSTPPE
NT seq 4110 nt   +upstreamnt  +downstreamnt
atgggccctgcacgaggctggctgctgggcctggttctactccttctggggacccaggct
gctctatccccgtccggtgaggaggggaagctggtccggaccatcagagtcagacgacag
gcaccttcagatggccccaccagtcaatctaacaaccagaccatcaaggagcagccaatg
gtcttcaaccatgtgtacaacatcaacgtgcccctagagtctctgtgctcagtggatctg
gattcagcagtgcctccacctagccaggccactagaggggctgtgtccagtgggggtggg
gagggcgccacggagttcacagagcagacagtggacgcagacagccaggtcaccttcacc
caccgcatcaacatccccaaacaggcctgcgcctgtcctacagccaacatcgtgcagcag
ctggccatccgcatcgagatgttggagagagaggtgttgctgctgagagcccagtgcagc
tctggcaactgtggctgtggggagagttcatccatgggtcacctggacttcattccccag
tgcagtggccatggcagcttcaaaatggacctgtgtggctgtgtgtgtgaggacagctgg
acgggcaagaactgctctgagccgcgctgcccagacgactgctccggacagggagtgtgt
atggagggtgagtgtgtgtgtgacagtgacttcggaggggacaactgctcggagccccgc
tgcccggcggactgctccggtcgagggctgtgcatggacggggagtgtatctgtgaggag
aacttcactggagaggactgtacactgggtcgctgcctcaatgactgctctgaccagggc
ctgtgcaccaacggaacctgccagtgtcgcccgggatacgtaggagaagactgctccttg
gcctactgcgccaacaactgcagtcagaagggcatttgtaaagaaggcttctgtgtctgc
caagatggcttcgctggagaagactgctctgcagtggctccggctctgaacttgcgcatg
cggggagtgacggagcataccattgacctggagtgggaggggtcagtgttgatgacggac
tacctggtcacctacgtggccaccagcccaggtggggtccagctggagatcaggatccct
gggaacaccacctcctgcagtatcccagacctggagcctggcatcgagtacaacatcaac
gtctacgctgtgctcaacaacgtcatcagtgcccctaccaacactcaggtgtcaacctat
ctctcaaatccagacggtttactcttcaaatccatcacggagacatccgtggaggtgcag
tggcaacctttctactactcatttgatggctgggaaataagcttcattcccaaggacaat
gatggagggatgacagcccagctacccagcaccatcacttcgttccaccagacaggcctg
aggccaggggaggagtataccgtcaacctggtagctctgagggaccaaggccgcagccag
cctgtatccgccaccgtcaccacattgattgatgggccgacacagctgatagtgcgtgat
gtctcggactctgtggccttcgtggagtggaccaatcccaaggcaaagatggaccagata
gtgctgcgttatggcctggtaggaggggacaggcccaagactactttccgtctgcagccc
accctcagccagtactccctgcagatgctgaggccaggctcgcgctatgaggtgtccatc
agtggtgttcgcaagggcaatgagagtggaacaatctccacagaattcagcaccgttctg
gtgttcctctcagagatcgacgcccccaagaacttgcgagtgctgtccaagttctccacc
accctggagctggagtgggacaacagcgaggcggaggtagaggggtaccaggtggtctac
agcaccctagcaggggaccaatacgagaaggtcattgtcccactcaacgatggacccacc
agcaagaccacactcacaaacttgttgccaggtacagagtatggcattggcatatcggct
atgcttggcaccaaccagagttctcctgccacaatgaacgccagaactggtctggatgtc
ccaatggacctgactgtgacagcgtccacagacaacaccatcaccctgctgtggggggtg
gtccaggggcctatcgaccactacatggttacctacacctcctcatctggcctgaccacg
gaggtgaccgtccccaaggacgtgaccaccaccacgctcaatgacctggagccaggcaca
gaatacaccatcactgtagctgcccataggggaaggcagcaaagcactgcagccaccatt
gatggcttcacaggctcccgccccatcatagcactctacttgtctgatgtcacatgggac
tcggtgacggtggcatggagcgcccctgccccacccgcagacctctacatcctcacctat
agctctgaggacggcactgacacgtccaaggttaccctggatggatccaagacccggtcc
tctatcaagggactcctgccctccacagagtacaccgtcagccttatcaccatacatgga
gaggtgaagtctgaggctgtcacagccacgctcaccacaggaatggatccacctaaagag
atgactgtgtcatatgccactgaagactccgtcatcatatcatggttgagaccattcgct
cccttcgactactacaagatgtcctatcaatcagcaagagggacagtggacagcgtggta
attgacaatgacgtcactaactacaccctgtccagcctccacccagcaacagagtatgag
atcaacctgaacgttgtgcggggcagccaggagagcaagtccatcaccaccagtgtcttc
acagcgatggacatgccaatggaactaacagccctcaacattaccccacaaggagcttta
ctccggtggaaccctcctctgtccagcgttgacaactacgtgttcaccctcacctgcaac
caggtgacagctaataccttcctggtggaaggtgtgaaacaggaccaccagcttagtaaa
ctcaagcccagcaccacttactctgtagccctctacgccaccaagggacccttgaccagt
ggaaccgtcatcgccaactttgaaacacccatggacgctcctctgaacctgacggctagc
gaggtgaaccaccgcagtgccctcatctcctggcaaccgcccatcgcagacatcgacaac
tacatgctcacatacaagtcagtggacggcaacagaaaggagctgatcctggatgccgag
gacacttggatccgtctggaggggctggcagagaccacagaatacactgtgaggttgcag
gctgccaggggattagagaccagcggaatcgtctctacggccttcacaacaggaaaccgt
ctgtttgccaccccccagaactgtgcccagcatctgctgaacggggagtccctcaatggc
gtctacaccatctacatcaacagagacgccaatcagggagtgcaagtctactgtgatatg
accacagacgaaggaggttggatcgtgttccaacgtcgtcagaacggcctgacagatttc
tccaggaaatggagtgactacagggtcggctttggaaacctagaggatgaattctggctc
ggtttggacaacatacagaagctctcagctcaaggtcgctatgagctccggatcgacatg
aaggatggccaggagtctgtctacgccagctatgacaagttcgccattggagacgccagg
aatctgtacaaactcaggataggagagtacaatggcacagctggggactcgctgagctat
caccaaggccgtcccttctccaccaaggacagagacaatgacattgccgtgaccaactgt
gctctgtcctacaaaggagcctggtggtacaaaaactgccatcgggccaacctgaacggg
aaatacggcgagtcgagacacagtcagggtatcaactggtaccactggaagggccatgag
ttctctgtcccctttgtggagatgaaaatgaggccgttcaactaccgcagcatcagtggc
aagcgaaggaggtccactcctccagaataa

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