Salvelinus fontinalis (brook trout): 129824021
Help
Entry
129824021 CDS
T11136
Name
(RefSeq) tenascin-N-like
KO
K06252
tenascin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129824021
04518 Integrin signaling
129824021
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129824021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfon00536
]
129824021
Glycosaminoglycan binding proteins [BR:
sfon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129824021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
EGF_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_Tenascin
Interfer-bind
EGF_PEAR1L
DUF7949
hEGF
Motif
Other DBs
NCBI-GeneID:
129824021
NCBI-ProteinID:
XP_055739264
LinkDB
All DBs
Position
26:complement(26656190..26687902)
Genome browser
AA seq
1118 aa
AA seq
DB search
MTTRLHWLSRALCLIGILCTVTTTYVTEDSPAPAEKGVTFSHIYKIDLAKSPDCKLALQT
MPHQQDQESGLQELEGGPTLEGDKDIVFRHQINLKTPKCDCDESERFKSLLYRVNGLEEE
VEHLKSQCSQGCCGGKSGGAGGVDTSCSGHGTYQHDTCSCQCNPGWEGPDCSISTCPDEC
NDHGRCVDGKCVCLAGYMGRDCSQMMCPGDCNDKGHCVDGKCVCFSHFTGEDCSEQKCSP
DCVHGTCVNGMCICDEGFFGDECSAVFGPNGLRLVRVTDVSLLVEWQAVRAAEYYVLTWH
PEGNEAERVTVPNTETSYLITGLRPGVTYIVQVYAVIKEIQSEGDRIEATTVVSGIDGIR
VLGQTEDSIQVDWQNPAAPLDHFRLTHANPDGQEEEQIVPMSAEARTTNTIVGLQPGTEY
LITVQGIKGTIEGKASFVTGVTDLDAPTNLSTKEVTEDSATVEWQKVQAEIDGYVISYSS
AEGSSGEIPVGADSSSYRLTGLRPGVIYTVYIWTVKGSQVSRKSSTEAETDLDAPANLLT
REVTEDTTTVTWEKVQAEIDGYVISYSSAEGSSGEIPVGADSSSYRLTGLRPGVIYTVYI
WAVKGSRVSRKSSIVAETDLDAPTNLLTREVTEDTADVSWDRPLADIDGYVISYSSAEGS
SGEIPVGADSSSYRLTGLRPGVIYTVYIWAVKGSRVSRKSSIEAETDLDAPTNLLTREVT
EDTADVSWDRPLADIDGYVISYSSAEGSSGEIPVGADSSSYRLTGLRPGVIYTVYIWAVK
GSRVSRKSSTPAETEIDSPKKLKASDVKLDAATLTWTAPLARIDGYILTFRAEDGTLKTS
EKKLRAGESRFAMSGLEMGKNYIVTLLAYRGAKRSRVIETTFKTVGLLYPFPMDCTQIKT
NGNMASGIYTIYINSDRTKPMEVYCDMDTDGGGWVVLQRRNNGQMDFMKRWRQYMAGFGN
MTDEFWLGLDNIYELTNTPTQYELRVDLGVGSEKAYAVYDNFKIAPAKQKFKLTIGKYRG
TAGDAMNYHQGRPFSTVDNDNDIALGNCALTHRGAWWYKNCHLANLNGKFGDNRHSMGVN
WEPWKGHLMSLDFTEMKIRPVGAARKRRSLSSRTAPRK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactactagacttcactggctctcaagagccctctgcctgataggcatactgtgcacc
gtcactaccacatatgtgacagaagattctcccgcccccgctgagaaaggagtcaccttc
agccacatctataagatagacctggccaagagccctgactgtaaattggccttgcagacc
atgcctcaccagcaggaccaggaatcaggtctgcaagagctggaggggggccctactctg
gagggggacaaggacatagtcttcaggcaccaaatcaacctcaagaccccaaagtgtgac
tgtgatgagtcagagcgcttcaagtctttgctgtacagagtcaacgggctggaggaggag
gtggaacacctgaagagtcagtgctcccagggctgctgtggtggcaaaagtggtggagca
ggaggtgtggacactagctgtagtggccacgggacctaccagcacgacacctgcagctgc
caatgtaaccctggctgggaaggcccagactgctccatctccacctgtcctgatgagtgc
aacgaccacgggcgctgtgtggatggcaagtgtgtgtgccttgctggctacatggggagg
gactgcagccagatgatgtgcccaggcgactgcaacgataagggacactgcgtggacggg
aagtgtgtgtgcttcagccacttcaccggcgaagactgcagtgaacagaaatgcagtcct
gactgcgtccacggcacctgcgtgaatggaatgtgtatctgtgacgagggcttctttggg
gatgaatgctctgcagtgtttggccctaacggcctgcgtctggtcagggtgactgatgtc
tcgctgctggtagagtggcaggcggtgagagcagcagagtactacgtcttgacctggcac
cctgagggcaacgaggcagagcgggtcaccgttcccaacacagagacctcctacctgatc
accggtcttaggccgggggtcacctacatagtgcaggtgtatgctgtcatcaaggagatc
cagagcgagggggacaggatagaggcgaccacagtggtgtctggtattgatggtatccgg
gtattgggccagactgaggactctatccaggtggactggcagaaccctgcagcacctctg
gaccacttcagactgacccatgctaaccctgacgggcaggaggaggagcagatcgtacct
atgagtgcagaggccaggaccaccaacaccatcgtaggactgcaacctggcactgagtac
ctcatcacagtgcaaggcatcaaaggcaccatcgaggggaaagcctccttcgtcaccggg
gtcacagatcttgacgctcctactaacctctcgaccaaagaagtgacagaggacagtgct
actgtggaatggcagaaggtacaagcagagatcgacggctacgtgatcagctacagctct
gctgagggttccagtggggagatccctgtgggggcagacagcagctcctacaggctgact
gggctgaggcctggagtcatctacacagtctacatctggactgtcaagggctcccaggtc
agcaggaagagctccacagaagctgagacagatctggatgctcctgctaacttgttgacc
agagaagtgacagaggacacaacgacagtaacatgggaaaaagtccaggctgaaatcgac
ggctatgtgatcagctacagctctgctgagggctccagtggggagatccctgtgggggca
gacagcagctcctacaggctgactgggctgaggcctggagtcatctacacagtctacatc
tgggctgtcaagggctcccgggtcagcaggaagagctccattgtagctgagacagatctg
gatgctcctactaacctcttgaccagagaagtgaccgaggacacagccgatgtgtcgtgg
gacagacctctagcggacatcgacggctacgtgatcagctacagctctgctgagggctcc
agtggggagatccctgtgggggcagacagcagctcctacaggctgactgggctgaggcct
ggagtcatctacacagtctacatctgggctgtcaagggctcccgggtcagcaggaagagc
tccattgaagctgagacagatctggatgctcctactaacctcttgaccagagaagtgacc
gaggacacagccgatgtgtcgtgggacagacctctagcggacatcgacggctacgtgatc
agctacagctctgctgagggctccagtggggagatccctgtgggggcagacagcagctcc
tacaggctgactgggctgaggcctggagtcatctacacagtctacatctgggctgtcaag
ggctcccgggtcagcaggaagagttccacaccagctgagacagaaattgattcgcctaag
aaactaaaagcgtcagatgttaagctggatgctgcgaccctgacctggactgctccctta
gccagaatcgatggctacatcctcacattcagagctgaggatggcacattgaagacttcg
gagaagaagctgagggcaggagagagcaggtttgccatgtcaggcctggagatgggaaag
aactatattgttaccctcctcgcttacagaggagcaaagaggagcagagtgatagagacc
acattcaaaacagtgggtttattgtacccgttccccatggactgtactcagattaagacg
aatggtaacatggcaagtggaatctacacgatttatatcaacagtgatcgcaccaagccc
atggaagtgtactgtgacatggacactgatggcggtggatgggtggtgttacaaagacgc
aacaatggacagatggacttcatgaagcgctggagacaatacatggccggctttgggaac
atgactgatgagttctggctcggtctggacaatatatatgagctgaccaatactcctacc
cagtatgagctgcgagtggacctgggtgtgggttcagagaaggcctatgctgtctatgac
aacttcaagatagctccagcaaagcagaagttcaagctgaccatcggcaaatacagagga
acagcaggtgatgccatgaactaccatcaaggtcgccctttctctactgttgacaatgac
aatgacattgctctcggtaactgcgcacttactcatcgtggtgcttggtggtacaagaac
tgtcaccttgccaacctgaacggcaaattcggagacaacagacacagcatgggtgtgaac
tgggagccatggaaaggccacctgatgtctcttgatttcactgagatgaagatccggcca
gtgggcgccgccaggaagaggaggtcgcttagcagcagaacagctcctagaaaatag
DBGET
integrated database retrieval system