Salvelinus fontinalis (brook trout): 129824140
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Entry
129824140 CDS
T11136
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129824140
04020 Calcium signaling pathway
129824140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129824140
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129824140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
129824140
NCBI-ProteinID:
XP_055739493
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All DBs
Position
26:complement(32947094..33047940)
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AA seq
2452 aa
AA seq
DB search
MPDHCAPVGLASGPKVCTTSWVMHGTRSSLSLPEPEAWRRTPRPSPGTTRQGGLAQGSRS
CSLQVPRSGLETLALPPRAASFDVPYRVEKAGSDTGSGSVSPCSMQRRRGGIVDQKDVIR
AHESHKMQSTPQARRKEWEMARFGEEVQMAMDSRDSGDPERGEDGGDTASGTGSGTGSGT
LKQTKAARARTMALYNPIPHRQNCLTVNRSLFIFAEDNLIRKTAKRIIEWPPFEWVILAT
ITANCIVLALEQHLPGEDKTPMAKRLECTEPYFIGIFCFEFGIKLVALGFVFHKGSYLRN
GWNIMDFIVVVSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAM
VPLLQIGLLLFFAILMFAIIGLEFYSGKLHHTCLPTADILENETMDTTEVEFACGVRKCP
EKYDCIGSWIGPNNGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGSMWNWMYFIP
LIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQVERELNGYRAWIDRAEEV
MLAEENKSSGRSALDVLKRATSKNAKRRGGPGDAEISTIGAPRMRIRTVRRGPVAYIRRK
ERMLRISLRRMVKTDTFYWTVLSLVALNTICVAIVHHNQPEWLSTFLYYAEFVFLGLFLA
EMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGMSFGISVLRALRLLRIFK
ITKYWASLRNLVVSLMSSMKSIISLLFLIFLFIVVFALLGMQLFGGRFIFEDYTPANFDT
FPAAIMTVFQILTGEDWNEVMYNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEEEEFFNARYARGRDGPMSERRRRPYLRRKKAIHRGRMAVPEEEE
ESDAPGGADQPPNGANAFSNRRDRQRRGGGGGGRGGRSVWEQRANQLRKRRQMESQEVLF
GGSPTEDTTDNPTTAYRAPTRSPDTSPGHLPESPMSGIMPMPEPPMSIAIQLPEPPDSEP
RPLFTLVEERAVHHRPAGGDRRHRVARKFRPGLGGAEEGGVARHRRHRHREARAEAKSRE
SPHEEVRESGSRERKIVEEREEKEEKEEKTDKEEVAEVEGGVSGQEEGASIVNLESEEEH
LRVCIADIPEPPLCDDFPESLPPPLLDPPPQMKEGEVGETGQCEPLSQDPPLEPAPEQFT
DPPELHAASGVNDSENNPASLNREQDEEPGQVLDSQTSVIIEMSGEQPLLEIIAMTALHS
NKEMELYQPERKEKEAQEEKEAQEEASPPKPVPPDSMFLFKASNPIRRICHYMVTMRYFE
MTILLVIVASSIALAAEDPVCTNSDRNRVLRYFDYVFTGVFTFEMVIKMIDLGLLLHDGS
YFRDLWNILDFIVVVGALFAFALTNVIGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLK
AVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSMDTEKECQGYYIDY
ARDKKEVKKREWKRHEFHYDNVCWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRGNR
MEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFTISAKPL
TCYMPQNRQTFQYRLWHFVVSPSFEYTVLVMIALNTVVLMMKYNSAPAAYDTVLKHLNTA
FTVLFSLECILKIMAFGLVNYFRDTWNIFDFITMLGSITEIIVDLQSINTFNMSFLKLFR
AARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNDENH
INQHNNFKTFSGALMLLFRSATGESWQEIMLSCLGGQECEPDSSMAPMTMSPDHEGGCGT
DFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWGEYDRVAC
GRIHYTAMYEMLTHMSPPLGLGKKCPRGMAYKRLVLMNMPVDEDMSVHFTSTLMSLIRTA
LEIKIARGQGMSGEDRVALDTELQKEISVIWPYLPQKTLDVLVPINKDSDMTVGKIYASM
MIMDYFKQNKAKKLRAQLESQKASLMPFKRLDASTLSEDILYNAHPLPCMSLSAGSALTR
GGLVALSPLSQDLFAMQPMTSDQDTSSQHSRVSAGEFSGLIPDSLALPFGKGLCVRASSM
PRLAVEPQTEMASGSIKRSSSTVADQRVNGLWQEEKKSPDRLYRPRHKSYKAAVSRSERK
RQLDTEKERGRSKERRHLLSPDTSRCNSEERSLQPSCSPSRERTHPLDKQGNSSDSPIPT
SESSTPSRRPLSQTPTRSHPHISYSPLVCRTHPPSGDDDDDRGSPETQRRGEASREAGGE
GQTGPRGRRHHHQQVSPLRRYPSEPYLTLQEDEHSPDPSGFMETLTFEAAVATSLGRANT
ISSTSSSSFSSARRGSRSGWQIPNGHFRKRLAQTVSVAGCEPLSDTEEDDRC
NT seq
7359 nt
NT seq
+upstream
nt +downstream
nt
atgccagaccattgcgccccagtgggtttggcttccggtcccaaagtctgcaccaccagt
tgggttatgcacggcacccgctcctccctctctctccctgagcccgaggcatggcgtcgg
accccgaggcccagcccgggcaccacccgtcaggggggcctagcccaggggtcccgctcc
tgctccctgcaggttccccgctccggcctggagaccctggctctacccccgcgggcggcc
agcttcgacgtcccttacagggtggaaaaggccgggtcggacacaggctcggggtctgtg
agcccctgtagtatgcagaggagacgcgggggcatcgtggatcagaaggatgtgatcaga
gcccacgagtcgcacaagatgcagagcacaccacaggcccgcaggaaagagtgggaaatg
gctcggtttggagaagaggttcagatggcgatggattctcgagactccggggacccggag
cgcggggaggacggcggggacacggcttcaggtacagggtcagggacagggtcggggacg
ctgaaacaaaccaaagcagcgagggcgcgcaccatggctctttacaaccctataccccac
cggcagaactgcctcaccgtcaacaggtcactctttatattcgccgaggacaatttaatt
cggaaaactgccaagaggatcatagaatggccaccgtttgagtgggtgatcctggcgacc
atcacggccaactgcatcgttctggccctggagcaacatcttcctggggaggacaagact
cccatggccaaaagactggagtgtactgagccttacttcatcgggatcttctgctttgag
tttggaatcaagctggtggcacttggctttgtgttccataaaggctcctacctgaggaat
ggatggaatatcatggacttcatcgtcgtggtcagcggaatactggcaacagcaggggcc
cacatgaacataccagtggatctgcggaccctgagggcggtgagagtcctgaggccactt
aaattggtctctgggatccccagcttgcagatcgtgctgaagtccatcatgaaggccatg
gtgcccctgctccagatcggtttgcttttgttcttcgccattcttatgttcgccatcatc
ggtctggagttctacagtgggaagctccaccacacctgtctacctactgctgacatcctg
gaaaatgagacgatggatacgaccgaggtggagtttgcgtgtggagtcaggaagtgtccg
gagaagtatgactgcatcgggtcatggattggccccaacaatggcatcacccagtttgac
aacatcctgttcgctgtgctcactgtcttccagtgcatcaccatggagggatggacagct
gtactctacaataccaacgatgccttgggctctatgtggaattggatgtactttatccct
ctcatcatcattggctcattcttcgtactcaacctggtgttgggagtcctctctggggag
tttgccaaagagagggagcgggtggagaacaggagagccttcatgaagctgagacgtcaa
cagcaggtggagagagaactcaatggatacagagcctggatagaccgagcagaggaggtg
atgctggctgaggagaacaagagttcagggagatctgctttagatgtgctgaagcgggcc
accagtaaaaatgctaagcgtagaggaggtcctggggatgcagagatctccactatagga
gcacctcgtatgcggatccggacagtgcggcgtggcccggtagcgtatatacgtcgtaag
gagcgtatgctgcgtatctccctgcggcgcatggtgaagaccgacaccttctactggacc
gtcctcagcctggtggctctcaacaccatctgtgtggccatcgtacatcataaccagcct
gaatggctctccaccttcttgtactatgcggagtttgttttcctggggctctttttggca
gagatgttcttaaagatgtacggcctgggttttcggctctatttccactcctccttcaac
tgcttcgactgtggagtgatagttggcagcatctttgaggtggtgtggggcttcttccgg
cctggcatgtcctttggcatcagcgtcctgagggcactgagactcctgaggatctttaag
atcaccaagtactgggcatctcttaggaacctggttgtgtctctcatgagttccatgaag
tccatcatcagtctgctcttcctcatcttcctcttcattgtcgtcttcgccctgctgggc
atgcagctctttgggggcaggttcatctttgaagattacactcctgccaactttgacacg
tttccagctgccatcatgacagtgttccagattctgactggtgaggactggaatgaggtg
atgtacaatggcatccgctcccaaggaggagtgcagtacggcatgtggtcctccatatac
ttcatagtgctcaccctgtttgggaactatacactactcaatgtcttcttggccatcgct
gtggataaccttgccaacgcacaggaactcaccaaggacgaagaggaggaagaggagttt
ttcaatgcgagatacgccagaggcagagatggcccgatgtctgagaggaggaggaggccc
tatctccgcaggaagaaggccattcacaggggccgtatggccgtccccgaagaggaggag
gagagcgacgccccaggcggagctgaccagccccccaatggggccaacgccttctccaac
cgccgtgacagacagaggagggggggaggaggaggaggaagaggcggaagatccgtgtgg
gagcagagggccaaccagttacgcaagcggcgccagatggagagccaggaggtgctgttc
ggaggcagccccaccgaggacaccactgacaaccctaccaccgcctaccgtgcacccacc
cgttccccagacaccagtcccggacacctgcccgagtcgcccatgtccgggatcatgccc
atgcctgaacccccgatgtccatcgccatccagctgccggaacctccagactctgagcct
aggcctttgtttacattggttgaggagagagcagtgcaccatcgacccgccggtggggac
aggaggcacagggtggcccggaagttcagacctggccttgggggggcggaggagggaggg
gtggctcggcataggaggcaccgtcatcgtgaggcccgggctgaggccaagagcagagag
tccccacatgaggaggtcagagaatcaggcagcagagagaggaagatagtagaagagagg
gaggagaaagaagaaaaagaggagaagacggacaaagaagaggtcgctgaggtggaggga
ggagtgtcgggccaggaagaaggagccagcattgtcaacttagagagtgaagaagagcat
ctgagagtgtgtattgcagacatccctgagcctcccctatgtgatgacttccctgagtcc
ctacccccacccctgttggaccctccaccccagatgaaggagggcgaggtgggggaaact
gggcagtgtgagcccctgtctcaggaccctccattggagccagccccagaacagttcaca
gaccccccagagctccatgcagcatccggggtcaatgattcagagaacaacccagcctcc
ctgaaccgtgagcaggatgaggagccaggccaagtcctagacagccagactagtgtgatc
atagagatgtctggagaacagccactgctggagatcatcgctatgacagctttacacagc
aacaaagagatggagctgtaccagcctgaaaggaaggagaaggaggcgcaggaggagaag
gaggcgcaggaggaggccagcccgcccaaacctgtacctcctgacagcatgttcctcttc
aaggcctccaatccgatcagaaggatctgtcactatatggtgaccatgcgctactttgag
atgaccatcttgctggtgatcgtggctagcagcatcgctctggctgctgaagaccctgtg
tgcaccaactctgacagaaacagggttctccgttactttgattacgtctttactggagtc
ttcacttttgaaatggtcataaagatgattgacctgggcctgcttctgcacgacggctcc
tacttccgtgacctgtggaacattctggacttcatcgtggtggtgggagctctgttcgcc
ttcgctctgacgaatgtgattgggaacaacaaaggcagagacatcaagaccatcaagtcc
ctcagggtcctgagagtcctacgacctctgaagaccatcaaaagactccccaaactcaag
gcagtgtttgactgtgtggtgacgtccctgaagaacgtcttcaacatcctcatcgtctac
aagctcttcatgttcatcttcgctgtcatcgccgtgcagctcttcaagggaaagttcttc
tattgcacagacagctccatggacacagagaaggagtgccaaggttactacatagactac
gctcgagacaagaaggaagtgaagaagagggagtggaagagacatgagttccactatgac
aatgtctgctgggctctgctcaccctcttcactgtttccactggagagggctggccgcag
gtcctgcagcattctgtggatgtgacagaggaggacaggggtccaagtcggggcaacagg
atggagatgtccatcttctacgtcgtctacttcgtggtcttccctttcttctttgtcaat
attttcgttgctctcatcatcatcaccttccaggagcagggggataagatgatggaggag
tgcagcttagagaaaaatgagagggcatgcattgactttaccatcagtgccaagcccctg
acctgctacatgcctcagaacagacagactttccagtacaggctgtggcactttgtggtg
tcaccgtcatttgagtacacagtgctggtcatgattgccctcaacactgtggtgctcatg
atgaagtacaactccgctccagcagcgtatgatacagtattgaagcacctgaacacagcc
ttcaccgttctcttctccctggagtgtatcctcaagatcatggcctttggtttagtgaac
tattttcgagacacttggaacatttttgatttcatcaccatgctcgggagcatcactgaa
atcattgtggacttacagtcaataaacacgttcaacatgagtttcctgaagctgttccgg
gctgccaggctgatcaagctgttgaggcagggctacaccatacgaatcctgctctggacc
ttcgtacaatcctttaaggcccttccttatgtgtgtctgctcatcgcaatgctgttcttc
atctatgccatcattgggatgcaggtgtttggaaacatcaaactgaacgacgaaaaccac
ataaaccagcacaacaacttcaagaccttctctggtgcgctgatgcttctcttcaggagt
gcgaccggggagtcatggcaggagatcatgctatcgtgtctgggggggcaggagtgtgag
ccagactcctccatggcacccatgaccatgtcccctgaccacgagggtggctgtggtact
gacttcgcctactgctactttgtctccttcatcttcttcagctccttcctgatgctgaat
ctgtttgtggctgtgatcatggataactttgagtacctgaccagagactcttccatcttg
ggacctcatcacctggatgagtttgtccgtgtctggggagagtacgaccgcgtagcatgt
gggcgcatacactacactgccatgtatgagatgttgacccacatgtctccaccccttggt
ctggggaagaaatgccccagaggtatggcctacaagaggctggtgttgatgaacatgcca
gtggatgaggacatgtcagtccacttcacctccaccttgatgtctctcatccgcaccgct
ctggagatcaagatcgcacgaggtcagggaatgagtggggaggaccgagtagctctggac
actgagctacagaaggagatcagtgtgatatggccgtacctcccccagaagaccctggat
gtactggtgcccatcaacaaagattccgacatgacagtaggtaagatatatgcctccatg
atgatcatggactacttcaaacagaacaaagccaagaagctgagagcacagctggaatca
cagaaggccagcctgatgccgttcaagaggctggatgcctcgactctctctgaagacatt
ctgtacaatgcccatcccctgccctgcatgtccctcagtgccggctccgccctgaccaga
ggaggcctggtggcattgagtcctctctcccaggacctgttcgccatgcagcccatgacc
tctgaccaggacaccagcagtcaacactccagggtgagtgcaggggagttcagtgggttg
attcctgactcactggcgctcccgtttggcaaggggctgtgtgtacgggcctcctctatg
ccacgtctggctgtagagccacagacggagatggccagtggctccattaagcggtcctcg
tctactgtggctgaccagagggttaatggactgtggcaggaggagaagaagagtcctgat
agactgtacagaccacgccacaagagctacaaggctgccgtctcccggtcagaaagaaag
aggcagttggacacggagaaggagcgcgggaggtccaaagagcgccgccacctcctctcc
ccagacacatcccgctgtaactctgaggagaggagtctgcagccctcatgctcccctagc
cgagagcgcacacaccccctggacaaacagggtaacagctccgacagccccatccccacc
tctgaatctagtacccctagtcgccgccccctgtcccagaccccaactcgctcccatccc
cacatctcctactcccctctggtgtgtcgcacacaccctccctccggggacgatgatgac
gacaggggcagcccagagacccagaggcggggggaggcctccagagaggcagggggagag
ggacagaccgggccaaggggccgtcgccaccaccaccagcaggtctcccctctgcgtcgc
tacccgtcggagccctatctcaccctgcaggaggacgagcacagtccggacccctccggg
ttcatggagacactgaccttcgaagcggcggtggccactagcctgggacgcgctaacaca
atcagctccacctccagctctagcttcagctcagcccgacggggctccaggagcggctgg
cagatccccaatggacacttccggaaacgcctggctcagaccgtctctgttgcaggctgt
gagccactcagcgacacagaggaggacgaccgctgctag
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