Salvelinus fontinalis (brook trout): 129824155
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Entry
129824155 CDS
T11136
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129824155 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfon01009
]
129824155 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129824155 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129824155 (rb1cc1)
Protein phosphatases and associated proteins [BR:
sfon01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129824155 (rb1cc1)
Membrane trafficking [BR:
sfon04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129824155 (rb1cc1)
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129824155 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
129824155
NCBI-ProteinID:
XP_055739540
LinkDB
All DBs
Position
26:complement(33603366..33621759)
Genome browser
AA seq
1634 aa
AA seq
DB search
MKLYVFQVNNGSTLAFDTELAVQTVLDLKHAIQVKYKIATQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLWKFDTAYINYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRHSYKECIEKSCSTPNKDSDETEEEKSTDSV
ICPTPTKLPASFSAPGAGGSPDTAEAQESSEMTDSSGLRAALQEADSPERANPLSFNVTL
LDWINVQDRPNDVESVVRKCFDSINRLDPRVIQPFLAECRDTIAKLDNQNMKAIKGLEDR
LYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIMLTNHR
KLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERVRVVDA
LSTVPQMYCLAVVEVVRRKLFIGHYREWACALVKDGKHLYETEKYKRETFGKLFRKSFLR
NRLFRGLDSWPPTSFCTRKPRRFDFELPDISLGDLQYLKTCCPTEVQLFLRVPTLCDFEP
LHLHVEMLQQLVLASQAASVDEMSQTITDLLSEQRGSCSQSAQRSTAAVTPRSDSTPGTS
SPKTPSSLSLPGPPCQPLLGPIALEDLSPDSIDAQTFDFETIGHPNMDPVLQQAGSLDLD
SLAESPESDFLSAVNEFVIENSPTPISDPTSPEMMVESLYSSVINAIDSKRMHDTTTLER
ENFKVATLKLSIEKYRCAAEESQANLRSVKDDLYHFRGLVLKEQRDFGFALKTMTIEVRN
MVDTIRKREEEELREQHQAELLSVQQDHEKQLQTLTEENRVNRNIVKDVQRAMLELEGLL
ERKEKELTQLEAERQCWTEAESGHTQRLRVLEQKISDQAQEVLTVAASRDSLYSQLETLH
IEIERGQQKIRQELEGTEQFHLQELEERMRQQHQAQLDTLARENQEAMECLATVNRVELS
EVADRHAASLTERDGQLRDLEARATELADLRCKLEVELALKESEMEVVRLLYEEAKHGQQ
EANVRKATVEAEAQSLNEQLVQVNGQLHARNEEYEKGLAELRMLMRMEKDQCISELVGRH
EEERNQHHSELTALQQQAQDAGRSHAEQLQNLQLDLDLQTAALRNDKEVQQRSFEEQEQH
LRTVICDLQTENDMLTKRLEQDTQAAQERLEKEESLKAAVPDAFKDFEQQKEEMEKRLLE
KIRQLENELQERQSSEREAGLLKVQTEGRGSEAGAPLSLDSALQERLQQETASLHTQLEL
LERRKDEEMQNLKTSLIAEQQTNFNTVLMREKLKKEQIISELTEELRKVTQQQEKDKGLI
EMLSEDRAIVMQEKKQLEEDLNRLRSTALVSSAYYSPNPLALEPTGAGARLGSGACPGPG
TEVGAGACSSELFPDPDRLASVAATREDDRVDSAVEASMVTVHDNILMMSEEKQRILLLE
RTLHMKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTV
GPTLYFLHSESLTALDLKPDPMFTSASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGT
KFYRVKAVPWNKKV
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggaagcactctggcatttgacacagagctt
gctgtccaaacagtgttggacctcaaacatgccatccaggtcaaatacaagattgcaacc
cagcatcaagttctggttgtcaatggaggggagtgtatggttgcagagaggagagtctgc
agctacagtgccggcactgacaccaaccccatattcctgttcaacaaagagatgattttg
tgtgaccgggctccgacgatccctaaaaccaccttctctattgagaatgagatggagctc
aaggtggaggagtcactaatgatgccagcagtctttcacaccgttgcctcgcgaacacaa
cttgctgtggaaatgtttgaagtcgccaagaaactttgctctttctgcgaacgcctggtt
catgatgaacatctccaacaccaaggttgggctgctatcatggcaaacctggatgactgc
accctgtcttatcagaagctattgtggaaatttgacacggcatacattaattatcaacaa
gactttgaggatatcaaattgaaactgacaaaactggggacagcagtttcagtcatggcc
aagatccccctgctggagtgtctgacccgccacagctacaaagaatgcatagagaagtcc
tgctccaccccaaacaaggactctgacgagaccgaggaggagaagtccaccgactcagtg
atctgccccacccccaccaagctacctgcatcgttctccgctccgggggcggggggctcg
cccgacaccgccgaagcccaggaaagcagtgagatgacggacagtagtgggctgagggca
gccctgcaagaggcagactctccagagagggccaaccccctgtccttcaacgtcacactg
ctggactggatcaacgttcaagacaggcccaatgacgtggaatcagtcgtgaggaaatgc
tttgactccatcaataggctcgacccacgggtcattcaaccattcttagcggaatgtcga
gacacgattgccaaattggataatcagaacatgaaagccatcaaaggacttgaggacagg
ttatacgctctagaccaaatgatagcgagctgtaaaaagttggtcaatgaacagaaggaa
cttgctcagggatttctagccaatcagaagcgtgctgagaacctgaaggatacgtccgtg
ctgcctgacctgtgtcttagtcacgccaatcagctgatgatcatgctgaccaaccacagg
aagctgctggacatcaaacagaagtgcaccactgccaaacaggagctggcgaacaaccta
caagttcgtctcaaatggtgctgctacgtgatgctgcacgcggaccaggatggggagaag
ctgcaggccctgctgaggctgctgaccgagctgatggagagagtccgggtggtggatgcc
ctcagcaccgtgcctcagatgtactgcctggctgtggttgaggtggtccgcaggaagctc
ttcatcggccactaccgagagtgggcctgtgctctcgtgaaggatggaaagcatctctat
gagactgagaagtataaaagggaaacgtttggcaagttgttcaggaaatcttttctccga
aatcggttgtttagaggacttgactcatggccccccacttcattttgcacaagaaagccc
agaaggtttgactttgagcttccagatatttcccttggtgacctgcagtacttaaagacc
tgttgtcctacagaggtgcagcttttcctcagggttccaacactgtgtgattttgagcct
ttgcatctgcatgtggagatgcttcaacagttggtccttgcttctcaagctgcaagtgtg
gatgagatgtctcaaactatcaccgatttactgagcgaacaaagggggtcgtgctcccag
agtgctcagagatccacggcagcggtgaccccacggtccgacagcaccccagggacttcc
tcccccaagaccccctcctctctcagtctcccggggcccccctgccagcccctccttggc
cccatcgccctggaggacctgtccccggacagcatcgatgcccaaacttttgacttcgag
acaattggccaccccaacatggaccccgtcctgcagcaggctggctccctggacctggac
tcactggctgagagccccgagtcagacttcttgtcggcggtcaacgagtttgtgatcgaa
aactcgcccacccccatcagcgaccccaccagcccagagatgatggtggagtcgctgtac
tcgtcggtcatcaacgccatagacagcaagcgcatgcatgacaccaccaccttagagagg
gaaaacttcaaggtggctacgctgaagctgagcatcgagaagtaccgctgtgctgccgag
gaatcccaggctaacttgcggagcgtcaaggatgacctgtaccacttcagaggactggtg
ctgaaggagcagcgagactttggcttcgccctgaagaccatgaccattgaggtgcgcaac
atggtggacaccatccgtaagagggaggaggaggagctgagggagcagcaccaggccgag
ctcctctctgtgcagcaggaccacgagaagcaacttcagaccctgacggaggagaaccgg
gtcaaccggaacatcgtgaaagacgtgcagcgggccatgctggagctggaggggctgctg
gagcgcaaggagaaggagctgacccagctcgaggctgagaggcagtgctggaccgaggcg
gagagcggacacactcagaggctcagggtcctggagcagaaaatcagcgatcaggcccaa
gaggtgctgactgtggctgcctccagagactccctgtacagccagttggagacactccac
attgagatcgagcgcggccagcagaagatccgccaggagctggaggggaccgagcagttc
cacctgcaggaactggaggagaggatgaggcagcagcaccaggcccagctagacaccctg
gcccgggagaaccaggaggctatggagtgcctggcaacggtgaacagggtcgagctgagt
gaggtcgcagaccgccacgccgcctctctgacagagagggacggccagctgagggacctg
gaggcccgggcaaccgagctggctgacctacgctgcaagctggaggtggagctggccctg
aaggagtcagagatggaggttgtgaggcttctctacgaggaggccaagcatgggcagcag
gaagccaacgtgaggaaggccactgttgaggcagaggcccagtccctcaacgaacagtta
gttcaggtcaacgggcagctgcatgctaggaacgaagagtatgagaagggcctggccgag
ctccggatgctgatgcgcatggagaaagaccagtgcatctcggagctggtgggcaggcac
gaggaagagaggaaccagcaccacagcgagctgactgccttgcagcagcaggcccaggac
gcaggaaggagccatgcagaacagctgcagaacctccaactagacctcgacctgcagacg
gcagcactgcgcaacgataaggaagtgcagcagaggagttttgaggagcaggagcaacac
ttgaggactgttatctgcgatttgcagacagaaaatgatatgctcaccaaaagattagag
caggacacccaagcagcccaggaacgtttggagaaagaggagtccttgaaggctgcagta
ccagatgccttcaaagactttgagcaacaaaaggaggagatggagaaaagacttctagaa
aaaattagacaacttgaaaatgagcttcaggaaagacaatcctcagaaagagaggcaggg
ttgttgaaggtgcagacagagggtcggggatccgaagcaggagctcctctctccctggac
tctgccttgcaggagcgtctgcagcaggagacagcctccctgcacacccagctggagctc
ctggagaggaggaaggacgaggagatgcagaacctcaagacctccctcatcgcagaacaa
cagactaacttcaacactgttctgatgcgagagaagctgaaaaaggaacagatcatcagt
gagctgacagaggagctgcggaaggttacccagcagcaggagaaggacaaaggtctgata
gagatgctgtctgaggaccgggccatcgtcatgcaggagaagaagcagttggaggaggat
ctgaaccggctgcgcagcaccgccctggtgtcctcagcctactacagccctaacccctta
gctctagagcccactggagccggggctagacttggatctggagcatgtcctggacctggg
actgaggttggggctggagcctgctcctcggagctcttccctgatccagacagactggcc
tctgtggctgccaccagagaggacgacagagtggactcggctgtggaggccagcatggtg
accgtgcacgataacatcctgatgatgtcggaggagaaacagcggatactgttacttgag
aggactttacatatgaaggaagaagaaaacaagcgcctcagtcaaagactgatgtctcaa
agcatgtcctcggtgtcatcacggcattcggagaaaattgccatcagagatttccaggtt
ggcgacttggttctgatcatcctagatgaaaggcatgacaactatgttctattcaccgtg
ggtcccaccctgtactttctccactctgagtccctcacggcactggacctcaaaccagat
cctatgtttacttcagcatcaggagcctcaagacggccgtgggttcttggaaaagttatg
gagaaagaatattgccaggcgaaaaaggctcaaaatcggttcaaagttcctttgggcacc
aagttctacagggtgaaagctgttccgtggaacaagaaagtatag
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integrated database retrieval system
