Salvelinus fontinalis (brook trout): 129824351
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Entry
129824351 CDS
T11136
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129824351
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
129824351
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
129824351
NCBI-ProteinID:
XP_055739914
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All DBs
Position
26:complement(40756600..40812360)
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AA seq
1202 aa
AA seq
DB search
MEAQFDMPMDKKATMKKKAAGGSGCSHISAPKAAASNCRSSNSGNCVDSVPAAAASQSAP
SVKQLGVASNAVMDEAEDDEEESKFQHPWLRRVGGSSSSGGGGGGGGSIRMKNFKPGGGA
VATATRNNSTNNEPSLLQAEDAPAATEPTVASKVIDTATCLGDNAGRGETNRVAGAETSG
AAITLEVLNAAAGDGCNSTAPISRMKCNKNGECRRDSGTGSLRSIISNKTAGAGRAEDGG
TLRRGACNSARASMDGSMTSSITQGHGEVGANPGITPVSTGVPEKKDSRVSFSNAPSRKA
SSSLHGSTQTQTTQQPRNSVTFQKPEEGPQIQTEDAEADGSTFMQRQFSAMLQPGVNKFS
LRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFNDG
TTTPWIIFNVISDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKTYLKTWFIVDFVSSI
PVDYIFLIVEKGIDSEMYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYD
LASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMVNDTWSELYSFAVF
KAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQEK
YKQVEQYMSFHKLPSDFRQKIHDYYEHRYQGKMFDEESILEELNEPLREEIVNFNCRKLV
ASMPLFANAEPNFVTAMLIMLRFEVFQPRDYIIREGTIGKKMYFIQHGVCNVITKGTLGM
KLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDR
LDRIGKKNTILMHKVQHDLNSGVFNNHENEMIQEIVKYDREMVKLVDLQRPRTMSMTSSA
PGGMFSPAGPSGAGALASLQQAVAMSFCPQGMGPMGGMGMPGMGLMGMPMGMGTGPMGPG
PMGLGMASGSGSGTLQSPRMLRRFQVVHSLSQSPVSASPLQSQPPQMAHATGAFGSAISS
PPVQSPLTHQGRTFQYMGGAGPSGSQLSLVQHHVPSPTHTIQRPSSHKSTHSLHSGTLSQ
DARALSSSQLSLPQEGTPVVALSPPQSTHPSTHASSTSIGPPQPTHPSQPGPSGVGVQVE
GRPTGAPQRVAFASTPPPGAPGMGAAVAAAESGIPDSGVPNKDLIDSLPELDSARSRLSS
NL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacaatttgacatgcccatggacaagaaggcgaccatgaaaaagaaggctgcg
ggcggaagcggatgtagccacatcagcgcgcccaaagctgccgcgtccaattgtaggagc
agcaacagcggcaattgtgttgactctgtccccgctgctgctgccagccagagcgcccca
agtgtgaagcagctcggcgtggccagcaacgccgtcatggacgaggctgaggatgatgag
gaggagtccaagtttcagcatccgtggctgcgccgagttggggggagcagcagtagcggt
ggtggtggaggcggaggaggtagtatcagaatgaagaactttaagccaggagggggagcc
gtggccacggctaccagaaataactctacaaacaacgagcccagcctactgcaagcggag
gacgcgcctgctgccactgagcccactgtagcatccaaagtgattgataccgcaacgtgt
ctgggagataatgccgggcgcggcgagaccaacagagtggcaggggcggagacgtctgga
gcagccatcacactagaggttttaaacgcggcagcaggtgatggttgcaatagcaccgct
ccaatttcaagaatgaaatgcaacaaaaacggagaatgcaggagggactccgggaccggg
agcctgcgctcgatcatctccaacaagactgccggggcggggagggccgaagacggaggg
acccttaggcgtggtgcctgtaactcagccagggccagcatggatggctccatgacaagc
tccatcacgcagggccacggggaagttggcgcaaaccccggcatcaccccggtttccacc
ggcgtccccgagaaaaaagactccagggtgtccttctccaacgcgccgagcaggaaagcc
tcctcatcgctgcacggctcgacccagacccagacgacccagcagcccaggaattctgtc
accttccagaagcccgaggagggaccccagatccagaccgaggatgccgaggctgacgga
agcaccttcatgcagcgacaattcagtgccatgctgcaacctggagttaacaaattctcc
ttacgtatgtatgggagtcaaaaggcggtggagagggagcaagagcgggttaaatcagcg
ggcaattggattatccacccctacagtgatttcaggttctactgggatttcacaatgctt
ctcttcatggtgggtaacctgatcatcatcccggtgggcatcaccttcttcaacgacggg
acaaccaccccttggatcatcttcaacgtcatctccgacaccttcttcctcatggacctg
gtcctcaacttccgcacaggcatcatcatcgaggacaactccgacatcatcctggacccc
aagaccatcaagaagacgtacctgaagacctggttcatcgtggactttgtctcctccatc
cccgtggattatatcttcctgatcgtggagaaggggatcgactctgagatgtataagacg
gccagggccctgaggatcgtacgattcactaagatccttagcctactgaggctgctgagg
ttgtcccggctcatccgctacatccaccagtgggaagagatcttccatatgacctatgac
ctggccagtgcggtgatgcgtatcttcaacctgattggtatgatgctgctgctgtgtcac
tgggatggctgtctacagttcctggttcccatgctgcaggacttcccctcagactgctgg
gtctccctcaacaagatggtgaatgacacctggtcggagctatattcgtttgcagtgttc
aaggcgatgagccacatgctgtgtatcggctacggtcggcaggccccggagagcctgtct
gatatctggctcaccatgctcagtatgatcgtcggggccacctgctatgctgtgttcata
ggccatgccacagcactcatccagtccctggactcgtcccgacgacagtaccaggagaag
tacaaacaagtggagcagtatatgtccttccacaagctgccgtccgacttccgacagaaa
atccatgattattacgagcaccggtaccaggggaagatgtttgatgaagagagcatcctg
gaagagctgaatgaaccactcagagaggaaattgtcaatttcaactgccgtaaactggtg
gcatccatgccactgttcgccaacgcagagcccaactttgtgacagccatgttgatcatg
ctccgcttcgaggtcttccagccccgtgattacatcatcagagagggcaccatcggcaag
aaaatgtactttatccagcacggagtctgtaatgtcatcactaagggaaccctgggaatg
aagctctctgatggctcctactttggagagatctgtttgctgacacgtggtcggcgtact
gccagtgttagagcggagacgtactgtcgtctctactccctgtctgtggacaacttcaat
gaggttctggaggagtaccccatgatgagacgggccttcgagacagtggccatcgaccga
ctggaccgcataggcaagaagaacaccattctgatgcacaaagtgcagcacgacctcaac
tccggcgtcttcaacaaccatgagaatgagatgatccaggagattgtcaagtacgaccgt
gagatggtcaaactggtggacctccagagaccccgcaccatgtccatgacttcctccgcc
cccgggggcatgttctcccctgcaggtccttccggggctggggccctcgctagcctccag
caggctgtggccatgagcttctgcccccaggggatggggccgatggggggaatggggatg
ccggggatggggctgatgggtatgccgatgggtatggggactgggccgatggggccaggt
ccgatggggcttgggatggcgtctggttcggggtcagggacgctgcagtccccccgcatg
ttgcggaggttccaggtggtccatagcctgtcccaaagcccagtctccgcatcccctctc
cagtcccagccaccccagatggctcatgcaacaggggcgtttgggtcggctatctccagc
ccaccagtccagagccctctgacgcaccagggacggacattccagtacatgggaggagca
gggccctctgggtctcagctgtccctggtgcagcaccacgttcccagtcccacgcacacc
atccagaggccctcctcgcacaagagcacccactccctccactcgggcactctgagccaa
gacgcccgtgccctctcctcctcccagctctccctccctcaggaaggaacccctgtcgtc
gccctcagccctccccaatcaacccacccatccacccatgcctcctctacctccatcggc
cctcctcagcccactcaccctagccagccggggccctccggggtgggggtccaggttgag
ggaagacccacgggagcaccacagcgtgtggctttcgcctctactcctcccccaggagca
cccgggatgggggcggctgtggcggcagctgagtcggggatcccggactctggggttcct
aacaaggatttgatcgatagcctaccggagttagactcggcccggagccggctgtcttct
aacttgtga
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