Salvelinus fontinalis (brook trout): 129824528
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Entry
129824528 CDS
T11136
Name
(RefSeq) transcription factor HES-1-B-like
KO
K06054
hairy and enhancer of split 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03460
Fanconi anemia pathway
sfon04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129824528
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129824528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129824528
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129824528
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
129824528
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
129824528
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
MAJIN
Motif
Other DBs
NCBI-GeneID:
129824528
NCBI-ProteinID:
XP_055740196
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Position
26:complement(17917453..17919237)
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AA seq
266 aa
AA seq
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MPADILEKTSPSSVAATPSSVNGNPDKLRTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRLQMTGAISTDPSVLGKYRAGFSECMSE
VTRFLSTCEGVNMELMSQLLSHLAGCVSQINTVNYSTHRQSLTYPPHPAHPTLGQAIVQI
PSASPQLNVIMPCKSGSPINFTSAVAKLYSGLQIVSATDGQFAFLIPSAALAHMSVPNAL
HGNPTVAVAVSPVAPPITADSVWRPW
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgatattttggagaaaacgtctccatcttctgttgcggccaccccgtcgagc
gtaaatggaaatccagataaactaaggactgcctcagagcacagaaagtcttctaaacca
attatggagaagagaagacgtgcgcgaatcaacgaaagccttggacagctcaagaccctc
atactggacgctctaaagaaagatagctccaggcattcgaagctggagaaggcggacatc
cttgagatgactgtgaagcacctaaggaatatgcagcgtcttcaaatgactggtgctata
agcacggatccgtcagtccttggcaagtacagagcgggattcagcgagtgcatgagtgaa
gtcacccgttttctgtccacatgtgaaggggtgaacatggagttaatgtcccaacttctc
agccacttagccggttgtgtgtcacagatcaacaccgtaaactactcaactcatcgccag
agcctcacttaccctccgcatccagctcatccaacgcttggccaagccattgtgcaaatc
ccaagtgcgtcgcctcagttgaatgtaatcatgccttgcaaaagtggctcgccaatcaac
ttcacgtcagcagtggctaaattatacagtggacttcagattgtgtcagcgacagatgga
caattcgcctttctgattccaagcgcggcccttgcgcatatgagcgtgccaaacgcccta
catggcaatccaacagttgcggtggcggtgtcacctgttgcacctcccatcactgcagac
tccgtgtggagaccatggtag
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