Salvelinus fontinalis (brook trout): 129824983
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Entry
129824983 CDS
T11136
Name
(RefSeq) CASP8-associated protein 2-like
KO
K25593
CASP8-associated protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129824983
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
129824983
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
YabA
Motif
Other DBs
NCBI-GeneID:
129824983
NCBI-ProteinID:
XP_055740565
LinkDB
All DBs
Position
27:8949617..8960494
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AA seq
1949 aa
AA seq
DB search
MEGDLMDEVYGDLSQDHHNTTAAFNEDSVDIYFGLESPKMNSNSERNYTLLSPQNLKYMD
LYEEIITEEQQDRESSYNELRTRFNAAQSQVDELMRRLQQTETQNTTLNTENSRLKKNIC
ALIKTAKMEVVRKDEEINRLSQSFRPRRGPVVHHQSQMNCLRNQIPTRQNPTEQSQPSQP
QVPTRLNPTGLSQLSQPLISTRQNLTGQPPPSQPPGPRKDCVVKDLSQLLCKDRDVVHPL
LPPTPSDATVFRPPLLDATVLRPPLPVTSKTARGDSEALVKRTVSSSSQDSVIRHPTREL
GPSDEPKQTKHREGGGENPRLPDSKEQRKCNSKSSKYPRLSDVEVCRRSERAKNPTSDIL
HCSASSNRTSEGLSKDGAAYQSKSSSRHYKELRRDKDDDNRHSRSTKDISSNRKHAYLNQ
ASVTERSSESFNRKGGTSPPRDHRRKEERRREDEIRKEKNRSKKSGERKSTCTERRRTKE
SDRCSTDVSKDKTMDNSKVGGQKTDEKSELLPSEAKVAEKSSVEENGPNRKLSFMETLNL
TLSPVKKPRRPAETKEQEGTPPEEVPDDQSAEDSGQPDLDKLIILDEINSSVVQSSSEIP
MPSEPESINLRHTDKEPCQDATKGLAEATVAKKQPKCQLEVEDTIVQDVSEGRPELPEAT
VDQRTEPTTPEPLRKVCVSARDCDIVLRTPLKSRPEQCASANKICESEDFTAAAVTATTV
TGNCGNNSNNDTGLSSNGFTPDHSMENETPSALVCKSQAVETVTQVPPAAAVCVGNPAVE
GVPGKEQSESLQLPLPASVISSSSLDVTAEVQDISKHGVSSTISMEVIPEICITSEIVND
VTEIPLECVKEKAVVEQSSPLSSIAVSKVSSTTGEVAPSAQHNSGLSQTPKKSLNTEPEN
EDVNVEPSSSIPLAHDEDSMRLTLSSLKGIPDAISPLTSPVRPMRKSHPPPCHSKPAYVK
SLCKELTSAAGDPNSKKLDVNMENKNPGRSIASATQQDVDWASVRSSSPEDELEEGEILS
EGEETPITPSSPDKTLRPTSTVKSQQIPKSSPRLSKKSPEEQGNSKLLSKTLSSPVGSPM
SKARYKTVQPPLPKAALCTVEEVMAMFVKIRYACRKKYMKLRSTFSKDRFCGVMDMSLDS
FTDFVDSVSFTELCSQEDDLKVKLKNNILSVLSKLSNNGIVNRIFDQEPLNMKSKLWDFV
NVQLDFLFKEIQTALRSVCKSANGNQSAGADKRDLSLSKQPVKSPKQPVKSPKQPVKSSV
STASKLKRPQGAVQKTNCVSRTSATKRPQEELTECVEHNIKRTRAQTLPPCKTGLGRGKN
IKMSFEEDKESEPQTSDHSLMQPPMQPPLQHGLEILPSNSSSSAEKTAAYVRRLSQNGSL
HDKSDFEILTEQQASNLTFNLVTDSQMGEIFKCLLQGSDLLETSVSAGDNQGWPLGTPRK
GERFRGVTTPSKVGTTTKVGTPSKVIATWSSISPCKFSSPNSKVQIPLNPALLDESCMLE
VPSSLPEDKMTSQASVFSQRSYSILAEDLAVSLTIPSPLKSDNHLSFLHPANVEPTSAPD
SVISAHFSEDALMDGEDATEQDIHLALDTDNSSGASSGGGRTREAPVNPLFHFKPHLPMQ
AVVMEKSNDHFIVRIRHANTSPDINSNNSSVNFTNPGINCTNPGINCTNPGINSTSLVVN
PTCLGVKSTSQGVNSSSPGSVKSTYPGNNSTNPDTNSSYPCVNSTSPQVNCTNPGIYPTS
ADINPRAVSSPQTPPGEEQHGKDKAHPTGLTPSKTPFSEASPPFYLITSTETASALSSPC
LTIIEDTPERDHSKGKTGKKRTKHHVEMKAKWPKKEVIPEKIKHKKKSSSAKGKETRSSK
RERSKVTTLPQSTPSPNSLSAKNIIIKKGAVVVTWTRDEDRDILLSLKMKGASPGTFSAL
SEKMNKTPAQIAERFSQLMKLFKKKKMAS
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgatttgatggatgaagtgtatggtgacctcagccaagaccaccataacacc
acagcagctttcaatgaagattctgtggatatttattttggtttagaaagtccaaagatg
aattcaaattcagaaaggaactacacactcctctcaccacagaatctgaaatatatggac
ttatatgaagaaatcataacagaggaacagcaggatagagagtcttcctacaatgagttg
aggacaagattcaatgcagcacaaagccaagttgatgagttaatgagaaggttgcagcag
actgaaacacagaatacaacgctgaacaccgagaacagccgcctgaagaagaacatctgt
gcgctcatcaaaacggctaaaatggaggttgtgcggaaggacgaggagataaataggttg
agccaaagtttcaggccaaggaggggtcctgtagttcaccatcaatctcagatgaactgc
ctgagaaatcaaattccaaccagacagaatcctacggagcagtcacaacctagccaacca
caagttccaaccagactaaatcctacggggctgtctcaacttagccaaccactaatttca
actagacagaatcttacagggcagcctccaccaagccaaccaccgggtcctagaaaggat
tgtgttgtaaaggatcttagccagctcctctgtaaagacagagatgtggtccaccccctt
ctccctccaaccccctctgatgcaacagttttccgaccacctcttctcgatgcaacagtt
ctcagaccacctcttcctgtcacttcaaagacagctagaggagattcagaagctctcgtg
aaacgcactgttagtagttccagccaggactctgtgattagacaccctacacgtgaactt
ggcccgtcagacgagccgaaacaaaccaagcaccgagaaggcggaggtgaaaatcccagg
ctgcccgactcaaaggagcagcggaaatgtaactccaagtcaagcaaataccctcgtctc
tcagatgttgaagtatgcaggagatcagagcgggctaaaaatccaacctcagacattttg
cattgcagtgcttcctctaaccgcacttctgaaggattgtctaaagatggtgcagcctat
caatcaaaaagttctagtcggcattataaggagctcaggcgtgataaggatgatgataat
aggcatagtagaagtactaaagacatttcctctaacagaaagcacgcctatttgaatcaa
gccagtgtcactgaacgatccagtgaatcttttaatcgcaagggagggacaagtcctcca
agggaccatcgaaggaaagaggagagaagaagagaggatgagatcagaaaagaaaagaat
agatcaaaaaaatcaggagaaagaaaaagcacttgtacagagagaagaagaacaaaggaa
agtgaccgatgcagtacggacgtaagtaaggacaagacaatggacaacagtaaagtcggg
gggcaaaagacagatgagaagtctgaattgcttccatctgaggctaaagtggctgagaaa
agctctgtagaggagaacggtccaaacagaaagttaagtttcatggaaactctgaatctt
accctgtcaccagttaaaaaaccaagacggcctgctgaaaccaaggaacaggagggcaca
ccacctgaggaagttcctgacgaccagtcagcggaagacagcggacagcctgatctagac
aaattaataatcttagatgaaatcaacagtagtgtggtacagtcctcttcagaaatccca
atgccttcagaacctgaaagtattaaccttagacatacagacaaagaaccttgtcaggat
gctaccaaaggtctggctgaggccacagtggccaaaaagcaacctaagtgccagttagaa
gtggaagacactattgtccaagatgtctcagaaggtaggcctgagctgccggaggccaca
gtggatcagaggactgaacccaccacaccagaacctctcaggaaggtttgtgtttcagct
cgagactgtgacattgttttgagaactccactgaaaagcagacctgaacaatgtgcctct
gcaaataaaatttgtgagtctgaggattttactgctgctgctgtcactgctactactgtt
actgggaattgtggaaacaattcaaataatgacactggcctatcttctaacggatttacc
cctgaccattcaatggaaaatgaaactcccagtgctttggtctgtaaaagtcaagctgtt
gaaactgtgacacaagttccacctgctgctgctgtctgtgtgggaaatcctgctgttgaa
ggtgttccaggaaaagaacaatcggaatctctgcaattgccactgcctgcctctgttatt
tcaagttctagtctagatgtgacggcggaggtgcaagatatttccaagcatggtgtttcc
agtacgattagcatggaggtaattccagagatctgcattacatctgagatcgttaatgat
gtcacagagatacctctggagtgtgtgaaagagaaagctgttgtggaacaaagttcaccg
ttgagcagtattgccgtgtctaaggtgagcagcacaacaggagaggttgcaccatcagca
cagcacaacagtggtttgtcacaaacaccaaagaagtccctcaatactgagccagagaat
gaggacgtgaatgtcgagccctctagctccattccattggcccatgacgaggactcgatg
aggcttacactgagcagccttaaaggtattccagatgccatcagcccactcacaagccca
gtccgtccaatgaggaaaagccatccgccgccatgtcacagcaaacctgcttacgtcaag
agtctttgcaaagagttgaccagtgctgctggggatcccaattcaaagaagttggatgtg
aatatggagaacaagaatcctggccgctccattgcaagtgctacacaacaagatgtggat
tgggcttctgtccgttcttccagccctgaggatgaattggaagagggtgaaattcttagt
gaaggggaagaaactccaatcactccaagttctccagacaaaacgcttaggcccacaagc
actgttaaaagtcaacaaattcccaagtcatcccctagactttccaagaagtcgcctgaa
gagcaagggaattctaaactcctaagtaaaaccttgagttcaccagttggaagccccatg
tcaaaagctcgctataaaactgttcaacctccgttacccaaagctgccttgtgtaccgtg
gaggaggttatggccatgtttgtaaagatccgctatgcgtgcaggaaaaagtacatgaag
cttcgttcaaccttctctaaggaccgcttctgcggtgttatggacatgtcccttgactct
tttacagactttgttgatagtgttagcttcactgaactatgcagccaagaagatgacctc
aaagtgaaactgaagaataacatactgtctgttttgagtaagttatcaaataatggcatt
gtcaaccgcatctttgaccaggaaccacttaatatgaagtcgaagctgtgggattttgtg
aatgtgcagttagacttcttattcaaggaaattcagactgctctgagaagtgtttgcaaa
tccgcaaatggaaaccagtctgcaggagctgataaaagggacttgagtctctccaagcag
ccagtgaagtcccccaagcagccagtgaagtcccccaagcagccagtgaagtcatcggtg
tccacagcctctaaacttaaaagaccgcagggagcggtacaaaaaacgaattgtgtgtcc
agaacatctgcaactaaaagaccgcaagaggaattaacagagtgtgttgaacacaacata
aaaagaaccagggctcagactctccccccttgcaaaactggtcttggaagaggcaaaaat
attaaaatgtcatttgaagaagataaggaatcagagcctcaaacctcagatcattctctt
atgcaacctccaatgcaacctcctttgcaacacgggttagagatcttaccatcaaacagc
tcttcatctgctgagaaaacagcagcctatgttcgccggctgtctcaaaatggctcactc
catgacaagtctgacttcgaaatcctcacagaacagcaagcctccaacctaacattcaac
ctggtgacagactcccagatgggagagatcttcaagtgtctcttacaagggtctgatctg
ctagaaactagtgtctcagctggcgacaatcagggctggcctcttggtactcctcgcaaa
ggagagcgcttccgaggcgttaccaccccaagcaaagttggtaccacaaccaaagttggt
actccctctaaagtcattgccacatggtcttctatttcaccttgcaagttttcctctcca
aattcaaaagtccaaattccactaaatccagctctgttggatgagagttgcatgttagag
gtgccctccagcctaccagaagacaaaatgacatcacaggccagtgtgttctcgcagaga
tcttattccattttggcagaagatctggctgtctccctcacaattccttcgcctctcaag
tctgacaatcacctcagcttcttgcacccagccaacgtggagcccacgtctgctccagat
agtgtcatcagtgcacacttcagtgaggatgctcttatggatggggaagatgctacagag
caggacattcacctcgccctggacacagacaactccagcggtgcgtcaagcggtggtggc
aggactagggaggctcctgttaaccccctgtttcacttcaagcctcacttgcccatgcag
gcagtagtgatggagaagtcaaatgatcatttcattgtgaggatacggcatgcaaacacc
agcccagacatcaactccaacaactcaagtgtcaacttcaccaacccaggcatcaactgc
accaacccaggcatcaactgcaccaacccaggcatcaactccaccagcctagtggtcaac
cccacatgcctaggagttaaatcaacaagccaaggagtcaactcttcaagcccaggaagt
gtaaaatctacctacccaggaaataactccaccaacccagacacaaactcaagctaccca
tgtgtcaactccacaagccctcaagtcaactgcaccaacccaggcatctaccccacaagt
gcagacatcaatccaagggctgtctcaagccctcaaacaccaccaggagaagaacaacat
ggcaaagacaaagctcatcccacaggactaactccttctaaaactcctttttcagaggcc
agtcctcctttctaccttatcacaagcaccgaaacagcatctgcgctatcttcaccatgc
ctcaccatcatagaagacacaccggagagagaccacagcaagggtaagaccgggaaaaag
aggacaaagcaccatgttgaaatgaaagcaaagtggcctaaaaaggaggtgatccctgag
aagatcaagcataaaaagaagtcctcaagtgccaaaggaaaggagactagaagctccaag
agagagagaagtaaagtcactactctaccccaatctaccccatcacccaacagcctgtct
gccaagaatatcatcataaaaaagggtgcagtggtggtgacttggacaagggatgaagac
cgagatattctcctctcgctgaagatgaaaggtgcctctccgggtactttctctgcccta
tcggagaagatgaacaagacacccgctcagattgcagagagattttctcagctgatgaag
ctttttaagaagaagaagatggcaagttga
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