KEGG   Salvelinus fontinalis (brook trout): 129824995
Entry
129824995         CDS       T11136                                 
Name
(RefSeq) collagen alpha-1(X) chain-like
  KO
K19479  collagen type X alpha
Organism
sfon  Salvelinus fontinalis (brook trout)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 129824995
NCBI-ProteinID: XP_055740595
LinkDB
Position
27:9881332..9887672
AA seq 661 aa
MDLRVTSVLLLLVALAVATPERYYHVQKVAKQQQHYPTKSHVQTVSGEPGIPGSPGEPGP
MGPPGPPGNNGVGHTGQQGPPGAPGPAGYSAAGKPGNPGGPGKPGSNGMPGEKGHTGATG
AMGPRGPPGSPGSPGPAGYSSAGKPGPHGLPGGMGPRGESGLKGHPGIPGLQGQKGERGV
GIPGAPGANGQVGPMGPSGMPGQPGVGKSGAPGYPGESGKSGTPGRDGAPGAMGQPGPKG
HNGNPGVGAPGKSGENGSPGMPGNMGPKGPQGHAGQPGAPGLPGVGKPGANGMPGDRGSP
GTSGTTGQKGEPGPTGYTGATGATGLMGPAGPQGARGFQGEPGMQGSKGDVGMLGAPGAK
GTKGDQGHQGYAGKAGIPGAAGPAGATGATGHQGNKGAQGHTGSPGQPGSNGLAGAKGHP
GTPGGPGKPGESGIPGTRGPVGPSGPAGQAGLRGHAGLPGAPGPAGQMAKGMSGPMGPPG
APGSRGHDGNPGAMGPPGPPGPPGEMVYQHEKSMPIKSHEIMMPHEMMKAPMSAFSAVLT
MAYPSAGSPVPFNQIIYNGEQHYDPQTGIFSCQVPGLYYFSYHMHVNGANALVALYKNGE
PIMFSYDEYNKGFLDQLSGSTVLMLNAHDQVYIQVPDEETNGVFAAENVHCSFSGFLIAS
T
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggacctcagagtgacaagcgttctcctcctcctggtggccttggccgtggcaacacca
gagagatactaccatgtacagaaagtagccaagcagcagcagcattatcctactaagagc
catgtgcaaactgtttcaggtgagccaggtattcccggatcccctggtgagccaggacct
atgggcccccctgggcctcccggcaataacggcgtgggacatactggacaacagggccca
cccggggcccccgggcccgctggctactccgcagctggcaagcctggcaatccaggtggt
cctgggaaaccaggtagtaatggaatgcccggtgagaagggtcatactggtgcaactgga
gccatgggtccaagaggaccccccggttcccctggaagcccaggacctgctggatactct
tctgctggcaaacctggcccacacggtctgcccggaggcatggggccaaggggtgagagt
ggacttaaaggacatccaggtatccctggtctgcaaggacaaaagggagagaggggagtt
ggtattcctggggcaccaggtgcaaacggtcaagtgggcccaatgggaccctctggtatg
ccagggcaacccggagttggtaagtctggtgcccctggataccctggggagtctgggaag
tcaggtactccaggtagggatggagctccaggagctatgggtcagccagggccaaagggc
cacaatggaaaccctggggtaggagcaccaggaaaatcaggtgagaatggcagtccaggt
atgcctggaaatatgggacctaaaggtccccagggacatgccggacaaccaggtgcacct
ggcttaccaggagttggtaaaccaggagctaatggcatgccaggtgacagaggatcaccc
ggtacatcaggaaccaccggtcagaaaggagagccagggccaacaggttacactggggca
acaggtgctactggccttatgggtccagctgggccacagggtgctagaggattccaggga
gaaccaggtatgcagggatctaaaggagatgtcggcatgctgggagctccaggggcaaag
ggaaccaagggggatcagggacatcagggttacgcagggaaggcaggtatccccggggca
gcaggcccagctggtgcaaccggcgctacaggacaccagggtaacaagggagctcagggc
catactggctctcccggtcagccaggttcaaatgggcttgcaggagcaaagggacaccca
ggcactcctggaggcccaggaaaaccaggcgagagcggcatcccaggaacaagaggacca
gtggggccttcaggtccagcaggtcaagcaggtcttaggggtcacgcaggtcttcccggt
gcacccggcccagctggccagatggccaagggaatgtctggtcctatgggtccacctgga
gctcctggttccagaggtcacgatggtaacccaggtgctatgggacctcctggcccacct
ggtccccctggtgagatggtctaccaacacgagaagagcatgcccatcaagtcccatgag
attatgatgcctcatgagatgatgaaggcccctatgtccgccttcagcgctgttctgacg
atggcttacccatctgcgggttcacccgttccattcaaccagattatttacaatggggag
cagcactatgacccccagactggcatcttctcctgccaggtaccaggtctctattacttc
tcctaccatatgcatgttaacggcgctaatgcattggtggcactgtacaaaaatggtgag
ccaatcatgttctcatacgatgagtacaacaagggcttcttggatcagttatctggcagc
actgtacttatgctgaatgcccatgaccaagtctacattcaggtccctgatgaggagacc
aatggtgtctttgctgctgaaaatgttcactgctctttctctgggttcctgattgcctca
acgtga

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