Salvelinus fontinalis (brook trout): 129825247
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Entry
129825247 CDS
T11136
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03410
Base excision repair
sfon04210
Apoptosis
sfon04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129825247 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129825247 (parp1)
04217 Necroptosis
129825247 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfon03032
]
129825247 (parp1)
03036 Chromosome and associated proteins [BR:
sfon03036
]
129825247 (parp1)
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129825247 (parp1)
Enzymes [BR:
sfon01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
129825247 (parp1)
DNA replication proteins [BR:
sfon03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
129825247 (parp1)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
129825247 (parp1)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
129825247 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
129825247
NCBI-ProteinID:
XP_055741154
LinkDB
All DBs
Position
27:19794070..19807945
Genome browser
AA seq
1012 aa
AA seq
DB search
MADAQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RASAHSPADIAGFSDLRWEDQEKVKKAIETGGAAGGKGDVKGGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVGRREELVFKPEYSATQ
LKGFNTLRVEDKEELKRRLPAIKSKGKRKTDEVDGEGASKKDEEEKKKVELQMKEQSQLI
WGIKDKLRQFCSTNDMKELLIANGQEVPSGESNVVDSLGDCMAFGALNPCEECQGQLVFK
SDAYYCTGDLSAWTKCVFKTQLPNRKGWVIPKEFHELAFLKKFKFKRQDRVFPKVSAAPP
PASSASAPVPSASSAPSIPLPEGAPADKPLTGMKLLTVGKLRQNKDELKAAVEELGGKIT
GTANKATLCLSTKKEVEKMSKKMEEAEEAGVRVVSEDFLTDIKSSGKALQELVSLHAISP
WGAEVKLETQAQSAASRSGATAGKSTKRVKEEGVNKASKKMKLTVKGGAAVDPDSCLENS
AHVLDQNGKIFSATLGLVDIVRGTNSYYKLQLLEDDVHKRYWVFRSWGRVGTTIGGNKLD
KFHDKNSAMDNFLGVYEEKTGNAWGSSHFTKYPNRFYPLEIDYGQDEEAVKRLTASAGTN
SLLAKPVQELIRTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLSEVQQAVSD
SSSESHILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVAYSLLKGGA
EDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYVKNTHAATHNTYTLEVEEIFKIVRE
GEYQQYRPFQDLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMVS
KSANYCHTSQSDPTGLLLLGEVALGNMHELKKASHITKLPKGKHSVKGLGRNAPDPSATV
TLDGVQVPLGKGTNTNIDDTSLLYNEYIVYDVAQVNLKYLLKIKFNYQMSMW
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcacaagaggacaagctttacaaagctgaatatgccaaaagtggacgtgct
tcgtgcaagaaatgtaaggaaaacattgcaaaggattcgctgcggatggctatcatggtg
cagtcgcccatgtttgacggtaaggtgccccactggcaccacttctcctgcttctggctg
cgggcgtctgcccattctcctgcagacatcgctggattctctgacttgcgatgggaggac
caggagaaggtcaagaaggccatcgagactgggggagctgcaggaggaaaaggtgatgtg
aagggtggggccaaaggagagaagactctgaatgactttgcagtggagtatgccaagtca
aaccgtagcacatgtaaagggtgtgagcagaaaattgaaaaggaccagatccgtgtatct
aagaagacggttgacccagagaagccccagctggggttgatagaccgctggtaccatacc
gcctgctttgttggccgcagggaggagctggtcttcaaaccagagtacagcgccacccag
ctcaaaggctttaacacactcagggtggaggacaaggaggagctgaagagaaggctgccc
gccatcaaatctaaaggaaagagaaagactgatgaggtagatggagaaggggcatcgaag
aaggatgaggaggagaagaagaaagtggagttgcagatgaaggagcagagccagctgatc
tggggcatcaaggacaagctcaggcagttctgttccaccaacgacatgaaggagctgctc
atcgccaacggacaggaagtgccctctggagagtccaatgtggtggacagcctaggcgac
tgcatggcctttggcgcactgaatccctgcgaggagtgccagggccagctggtgttcaag
agcgacgcctactactgcactggagacctctccgcctggaccaagtgtgtgttcaagacc
cagctgcccaaccgcaagggctgggtcatccccaaggagttccatgagcttgccttcctc
aagaagttcaagtttaagagacaggaccgggtgttccccaaggtgtccgccgcccctccc
ccagcctcctctgcatccgctccagtccccagtgcctccagtgctcccagtatacccctc
ccagagggagcccctgcagataagcctctgacagggatgaagttgctgactgtgggcaag
ctgagacagaacaaggacgagctgaaggctgccgtggaggagctgggcgggaagatcacc
ggcacagccaataaggctactctctgcctcagcaccaagaaggaggtagagaagatgagt
aagaagatggaggaggcggaggaggcgggcgtgcgcgtggtctcggaggacttcctcact
gacatcaagtcctcgggcaaggccctgcaggagctggtctccctgcatgccatctccccc
tggggggccgaggtcaaactagagacccaggctcagtcagcggcctccaggtctggagcc
acggctggcaagagcaccaaaagggtgaaggaggaaggtgttaacaaggccagtaagaag
atgaagctgactgtgaaaggaggagcagcagtggaccccgactcatgtctagagaacagt
gctcatgtcctggatcagaacggcaagatcttcagtgctacgctaggtctggtggacatc
gtcaggggaaccaactcctactacaaactgcagctgctggaggacgatgtgcataaacgg
tactgggtgttccgctcctggggcagagtgggcaccaccatcgggggaaataagcttgat
aagttccatgataagaactctgccatggacaacttcctgggtgtgtacgaagagaagaca
ggcaacgcctggggctcttcccacttcaccaagtatcccaacaggttctaccctctggag
atcgactacggtcaggatgaggaggcggtgaagaggctgacagccagtgctggcacaaac
tctctgctggccaagcctgtccaggaactcatcaggaccatctttgatgtggagagcatg
aagaaggccatggtggagtttgagattgacctgcagaagatgccgctggggaagctgagt
aagaggcagatccagagtgcctacgccctcctcagtgaggtgcagcaggctgtatcagac
agttcctcagagtcccacattctggacctgtccaatcgcttctacaccctcatacctcac
gactttggcatgaagaaaccaccgctgctcagcaaccttgactacattcaggctaaggtc
cagatgttggacaacctgctggacattgaagtggcctacagtctgctgaaaggaggggct
gaggataacaagaaggaccctatcgacatcaactatgagaaactcaaaaccaagattgag
gttgttgacaagaccacaaaggaggcagagatcattctgcagtatgtcaagaacacacac
gctgctacacacaacacatacacactggaagttgaggagatcttcaagatcgttagggag
ggagagtaccagcagtaccgcccgttccaggatctgcccaatcgacagcttctgtggcac
ggttctcgtgccaccaactacgctggtatcctttctcagggtctgcgtatcgcccctcct
gaagcccctgtgacgggttacatgtttggcaaaggtgtgtactttgccgacatggtgtcc
aagtcggccaactactgccacacctcccagtccgacccaactggcctacttctactggga
gaggtcgccctcggaaacatgcatgaactgaagaaggcctcacacattacaaaactaccc
aagggtaaacacagcgtgaaaggtttgggtcgaaatgccccagatcctagtgccactgtc
actttagacggggtgcaagtgcctttgggaaaaggaaccaacaccaacatcgacgacacg
agtctgctgtacaacgaatacattgtgtatgatgtggcacaggtgaacctgaagtacctg
ttgaagatcaagttcaactaccagatgtccatgtggtga
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