Salvelinus fontinalis (brook trout): 129825278
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Entry
129825278 CDS
T11136
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
129825278 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129825278 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129825278 (esr1)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
129825278 (esr1)
Nuclear receptors [BR:
sfon03310
]
3. Estrogen like
3A. Estrogen receptor
129825278 (esr1)
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Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
129825278
NCBI-ProteinID:
XP_055741222
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Position
27:complement(20687419..20715535)
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AA seq
617 aa
AA seq
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MLVRQSHTQISKPLGAPLRSRTTLESPTISPPKLSPQQPTTPNSNMYPEETRGGGGAAAF
NYLDGGYDYTAPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPF
LHPPSHHGLPSQSYYLETSSTPLYRSSVVTNQLSASEEKLCIASDRQQSYSAAGSGVRVF
EMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRNRRKS
CQACRLRKCYEVGMVKGGLRKDRGGRILRKDKRYCGPAGDREKPYGDLEHRTAPLQDGGR
NSSSLNGGGGWRGPRITMPPEQVLFLLQGAEPPALCSRQKVARPYTEVTMMTLLTSMADK
ELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILDR
SEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCSNSVESLHNS
SAVESMLNNITDALIHHISHSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLYSIKCKN
KVPLYDLLLEMLDGHRLQSPGKVAQAGEQTEGPSTTTTTSTGSSIGPMRGSQDIHIRSPG
SGVLQYGSPSSDQMPIP
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccccaccatctcccccccaaaactctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagacacgcggaggtggtggggcagccgccttt
aactacctggacggagggtatgactacacagcccctgcccaaggcccggcccccctctat
tactccaccaccccccaggatgcccacggacccccttcggatggcagcatgcagtccctg
ggcagcagtcccactggcccactggtgtttgtgtcctccagcccccagctcagccccttc
ctccaccccccaagccaccatggtctccccagccagtcatactacctggagacctcttcc
acacccttatacaggtcgagtgtggtaaccaatcagctatcagcgtcagaggagaagctc
tgcatcgcctccgataggcagcagtcgtacagtgcggcagggtcaggggtcagggtgttt
gagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcctctgggtaccac
tacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagcatccaaggtcac
aatgactacatgtgccctgcgactaaccagtgtacaatggacaggaatcgtaggaagagc
tgccaggcatgccgactcagaaagtgttatgaagtggggatggtgaaaggaggcttgcgt
aaggaccgtggtgggcggattctcaggaaggataagcggtattgtggccctgctggtgac
agagagaaaccctacggagacctggagcacaggacagcgccccttcaggacgggggtagg
aacagcagcagccttaatggtggtggaggatggcgtgggcccagaatcaccatgcctcct
gaacaggtgctgttcttgctgcagggggcagagcctccggccctgtgttctcgtcagaag
gtggcccgcccctacacagaggtcaccatgatgaccctgctcaccagcatggccgacaag
gagctggtgcacatgatcgcttgggctaagaaagtaccaggtttccaggagctgtctctc
catgaccaggtgcagctgctggagagttcctggctggaggtgctgatgatcggactcata
tggagatccatccactgccctgggaaactcatcttcgcccaggacctcatactggacagg
agtgaaggggactgtgtggagggtatggctgagatcttcgacatgctcctggccactgtg
tctcgcttccgcatgctcaaactgaagcctgaggagtttgtgtgcctcaaagccatcatc
ttgctcaactctggtgccttctccttctgttccaactctgtggagtcccttcacaacagc
tcggcagtggaaagcatgctgaacaacatcactgatgccctcatccaccacatcagccat
tcaggagcctctgtgcagcagcagcccagacggcaggcccagctcctgctcctgctctca
cacatcagacatatgagcaacaaaggcatggagcacctttacagcattaaatgtaagaac
aaagtgcctctgtacgacctgctcctggagatgctggacggtcaccggctccaatcccca
ggcaaagtggcccaagctggggaacagaccgagggcccctctaccaccactaccacctcc
acaggctccagcatagggccgatgcgaggcagccaggatatccacatcagaagccctggt
tcgggggtactccagtatggctcccccagctcagaccagatgcccattccgtga
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