Salvelinus fontinalis (brook trout): 129825296
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Entry
129825296 CDS
T11136
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129825296
Membrane trafficking [BR:
sfon04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129825296
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
129825296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR5
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Lgl_C
Beta-prop_WDR36-Utp21_2nd
PEP5_VPS11_N
Beta-prop_Aladin
KNTC1_N
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
CFAP43_N
Synaptobrevin
Beta-prop_IFT122_2nd
WD40_like
Motif
Other DBs
NCBI-GeneID:
129825296
NCBI-ProteinID:
XP_055741255
LinkDB
All DBs
Position
27:21692082..21861341
Genome browser
AA seq
1148 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSVSSGQSGAPENNLMHETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVESYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQRRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYEAGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEDKQNTEIVDEDPFAIQIMAWCPESRRLCVAGVSANLIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGAASPSPQTTGPPTHPSTSSNSSDGVRDNVP
CLKVRSTPLKQSSGYQVELVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYL
QKTVLLNLGTVELYGSNDPYQRQARSPRKTRQPAGGNGLCDINEGSASEDRCKSPTSVLA
SNHQQFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVT
SIDKEAREAITSFHFCETFARKGDSAITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPVI
VLPSGTLARLKGSILRMAFLDNTGTFLPPAFETWYEPNAAGADSEERDKARKRRPVSVSP
STSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACFC
ANGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQETC
ENLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGETQAGKASRGLAQHIPG
PQGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLKC
KDKKWYQF
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcctaaaggagcaggcgtcttcctct
gtttcgtctggccagtcgggcgccccggagaacaatttgatgcacgagacccttcagtcc
gagaattttcagctctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgatccagtccagaagatcctggccattgggacccagagcggggccctcagactg
tttggtcgtccaggtgtggagtcctactgtcaacatgagagtggagcagccgtcatctcg
ctacagtttctcatcaatgagggggcgctggtgagtgctctggcagacgacagcgtgcac
ctctggaacctgaggcagaggaggcccgccatcctccactcactcaagttcaacagagag
aggatcacattcgtccacctgccattccagagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtcgttcacactctcaggctacgtcattatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgagggaaagcttatcattggatatgaggctggaattgtggtcttgtgg
gatctgaaatctaagaaagcagactaccgctacacttacgacgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacatcaagggccagggcaagccattccagacaatcaccccacatggaaagcagccc
aaggatggaaagaagccagagccctgcaaacccatcctcaaagtggagtacaagaccact
agactgggagaccccttcatgatcctgtctggaggtctgtcgtatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggagatggactatcct
atcgtagacttcctcacgctctgtgagacgccatactctaacgattttcaggaaccttat
gctgtagtggtccttctagaaaaggatttagtagtaatcgaccttgcacaaaatggttac
cccatattcgagaacccctatccactgaccatccatgagtctccggtgacctgctgtgag
tactttgctgactgccctgtggatctcatacctgcactttactctgttgggtccagacag
aaacgacagggctacagcaaaaaggagtggccaatcagtggtggtaactggggcctcggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gatgcttctgcaataatgctccaggtactgtacaagctgaagacggccaaggtgtttgag
aagagcaggaataataaggaggacaagcagaacacagagattgtggatgaggacccgttt
gccatccagatcatggcctggtgtcctgagagcaggaggctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaagcaggagatcaccaccgaggtcgtacagctg
ttggaggtacgtctgcagtacgaggtgaatgacatggagtcccctccagaggggggagga
gggggggaccgtgacctgcccaccccaggagcagcctcacctagcccccagaccaccgga
cccccgactcacccctccaccagcagcaactcctctgacggggtccgagacaacgtaccc
tgcctcaaggtgcgtagtacccctctgaagcagtcttcagggtatcaggtagagttggtg
gtgcagctggtgtgggtaagtggagagcccccccaacagatcaccagcttggccctcaac
tcctcctacggcctaattgtgtttgggaacagtaatgggctggcagtggtggactacctc
cagaagacagtgctgttgaacctggggacagtggagctgtatgggtctaacgatccctac
cagagacaggctcgctctccacgcaagacacgccagcccgccggaggtaatggtctctgt
gacatcaacgagggttctgcctcggaggaccgctgcaaatcccccacttcagtgttggcg
tcaaaccatcagcaattctacaatggaggtggtagaggagcaaagatgtcacggaaatta
agcttgcctactgagctaaagccagacttggttctcctgtctgtatgtcctccacggggc
gccaacccattagaccaccgggacaactccttcagccggtcacgctcctcctccgtcacg
tccatagacaaggaggcgcgcgaggccatcacctccttccacttctgtgagacattcgcc
cggaagggggacagcgccatcacaccatgcctgtacgtgggaacctccctgggaacagtg
ctggctgtggccctcaacctgccccctgctggggaacaaaggctgctgcagcccgttatc
gtcttacctagcggtaccctggcgcgactgaagggcagtatcctgaggatggccttccta
gacaacacaggaaccttcctcccccctgcctttgagacctggtatgagccaaacgctgcg
ggcgccgacagtgaggagcgagacaaggcccgtaaacgccgcccggtctctgtgtcgccc
tccacctcccaggagctgcaggagagccagtatgcggtggtgtgctctgagaaacaggct
aaggtcatagcactgccctcacagaactgcatcttcaaacacagcatcacagagacatcg
ttcgtcctgagggctgacgtggtccagatgaacatagggaactgtgtggcctgcttctgt
gctaacggacacatcatgaccctcagtctgccggggctgagaccgttgctggatgtaaac
tacctgccactgacagacatgcggatagcccggaccttctgctttaccaacctgggccag
gccatgtacctcacctcccccactgagatacagaggatcacatacagccaggagacctgt
gagaacctgcaggagatgctgggagaactgttcacaccagtggaaaccccagaggctccc
aaccgaggattcttcaagggcctttttgggggaggagcaacttccctggacagagaggaa
ctatttggtgagacgcaggcgggtaaggcgtcccgtggccttgcccagcacatcccaggt
cctcagggcctggagggcatgaagggggcagcctcgggcgtggtggccgacctggcgcgt
gcccggatagcactggatgagagagggcagaaactgggcgagctggacgagaggacggct
gccatgttggccagcgccgactcctttggcaaacacgcccatgacatgatgctgaagtgc
aaagacaagaagtggtaccagttctga
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