Salvelinus fontinalis (brook trout): 129825346
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Entry
129825346 CDS
T11136
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
129825346
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
129825346
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
KGK
Motif
Other DBs
NCBI-GeneID:
129825346
NCBI-ProteinID:
XP_055741344
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Position
27:complement(25050658..25067282)
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AA seq
700 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGAWCHQRAVTLQPAEHDGTLWKRIISVPRGA
VSTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDNGQFGFHNGLECV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEEEEDDEEQEQSAVA
WHKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYVIHTMDPDNLELTFDFFEEDM
GEHVVAGDAHPGTVGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPI
EGLQCEMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVE
FDVHLSKDCVPIVYHDLTCCISTKKKGDKLSLDLFEVPVKDLTYDQLQQLKLGHASALKV
NDHKDDDEEEEVDEHQPFPSFSQIFQAVPENVGFNIELKWVCQMKDGSWEGNLSSYFNMN
LFLDIILTCVLQRAGKRRIVFSCFDPDICTMVRQKQNKYPILFLTQGISEIYPELMDIRC
RTTQIAMSFAQSENLLGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLRE
QGIDGLIYDRICESWWPNHVIDSHPTGSSDAIADHVMICDDQVEQPNIFKVEEQHTLQET
LKSFVCSCYTIPCQAAPVCPSSTSKKHNGSAESDSGLSSS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gccgtggttggtagctgtgaagctttaggagcctggtgccatcagagagctgtgacccta
caacctgctgaacacgatggcacattgtggaagaggatcatcagtgtgcccagaggtgct
gtgtcaacctaccgctatttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccaccagcagccacgcctgatgagccccaca
gaatcacaccttgatattgacaatggccaatttggattccacaatggcttagagtgtgtg
gactctgggtggctgacgtgccagacagagatccgtttgcgtctgcactattcaaagacg
tctcctgtatccatcaccaagaagaaatataagaagtctcgtttcaggatcaagctgaca
ctggaaggtgtagaagaggaggaggaggatgatgaagagcaggagcagagcgcggtagcg
tggcacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcc
cgccactcccagcctgagtgtggttatgccctggaggcctcacagtggacagagtacgtc
atccacaccatggaccctgacaacctggaactcacctttgacttctttgaggaggacatg
ggtgagcatgtggtggcaggggatgcccacccggggaccgtgggtacggcctgccttctc
tcctcattctttgtggagagtggcaaggacacgggtgtggtcactctgcccatcatgaaa
cgcaactccagacagaccctgggcaaagtccgagtggactacctggtgatccgtcctatc
gagggactacagtgtgaaatgagctcgtccttcaccaagtactggaggaagaggagtgcc
cccctggacgtaggccacagaggggccggcagcacacacgcagccaaacataccaaagtt
agggagaacaccattgcctcgtttaaaagtgctgccaatcatggggctgcctatgtagag
tttgacgtccatctctccaaggactgcgtccccatcgtgtaccacgatctcacctgctgc
atctccactaagaagaaaggagacaagctctctctggacctgtttgaagttcctgtcaaa
gacctcacatacgaccagctacagcagctcaagttgggccatgcttctgccttgaaggtg
aacgaccacaaagatgatgatgaagaggaggaggttgacgagcatcagcccttcccttcc
ttttcccagatattccaagcagtgcctgaaaatgtgggcttcaacatcgagctgaagtgg
gtttgtcagatgaaggatggttcgtgggaaggaaacctgtcctcgtacttcaacatgaac
ctgttcctggacatcatactgacctgtgtgctgcagagagctggcaagagacgcatcgtc
ttctcctgcttcgaccctgacatctgcactatggttcgtcagaagcagaacaagtaccca
atcctgttcctgacccagggcatctctgagatctacccggagctcatggacatccgctgt
cgcaccacacagatcgccatgagcttcgcacagagcgaaaacctcctgggtattagtgcc
cacactgaggagctccttcagaacctggagcacatccgagaggcccagtctaaaggcctg
gtagtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctacgggaa
cagggcattgacggactcatctacgacagaatatgtgaaagctggtggccaaatcatgtc
attgactctcaccctactggttcttctgatgccatagctgatcatgtaatgatctgtgac
gaccaggtcgagcagcctaacatcttcaaagtagaggagcagcacacgctgcaggaaacg
ctcaagagctttgtgtgttcctgctacaccatcccctgccaggcggctcctgtctgcccc
tcctccacctccaagaagcacaatggcagtgcagagtctgactcgggcctcagctcctcc
tga
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