Salvelinus fontinalis (brook trout): 129825380
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Entry
129825380 CDS
T11136
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54-like isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129825380
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
129825380
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
129825380
NCBI-ProteinID:
XP_055741422
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Position
2:complement(73961587..73967019)
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AA seq
522 aa
AA seq
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MADQNKTSVKVEIGNELLNPSELFETRTRSHKIPVRGQKDFIPTGSDQQKDWLQQSLDEH
WNLVSEERVERLGNLVKAVWIPSDMIVELQSPAGKFWQTMGFSAHGKQCLHPEEALYLME
CGNLQVFYQDLPLSIQEGYERFLYLKTMSIQHYQVFGHLKRLGYVVNRFDPSSVLSQYER
QLNLPQSRDRSGRLPKRKRSHSPTSRHTGTQEGPTSKRMEEEKDCNREEEDKNPDSLPDI
SAPDIDEIQTTSHVDPTTSTEGGQGRSWWSTEGSPDPDSELPGQPQSSPRWDFSSIPFPD
LGSRRWLPSSLTSPDPCLLPGAVGSVGACDVAPWLQRLNLREVRMSRREWERERDRDRYR
RDINQDREVRRCRNWAEYQELQERRIQRSRRDRPAHLWEGPVTPLHDPAQVTSTGELLDK
ISVIKSTRLLEGASSLKGSEEWRICFNIYQPDTVAEFKKSAPGKPYSRMCVCSFDGPVPD
LWTLKLLAFQSGDVPVTYAVVDHGDISFYSFKDFQIPADTSF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaaacaaaacatcagttaaagtagaaatcggcaatgaattactaaaccca
tctgagctgttcgaaacccgcacgcgcagccacaagatcccggtgcgcgggcagaaggat
ttcattcccactgggtcggatcagcaaaaggattggcttcagcagagtttggacgagcac
tggaatctagtatctgaggagcgagtggagaggttagggaacctggtgaaggcagtgtgg
attcccagtgacatgatagtggagctgcagtcaccagcagggaagttttggcagactatg
gggttttctgcccatggtaagcaatgtctacatccagaagaggctctctatctaatggag
tgtggaaacctgcaagtgttctaccaagacctgccactgtccatccaagagggctatgag
agatttctatacttgaagacaatgagtatacagcattaccaggtttttggccatttgaag
cgacttggttatgtggtgaacagatttgatcccagttctgtgctatcgcagtatgagagg
cagttgaacctgccccagtcccgagacagatcaggaagacttccgaagaggaaacgcagc
cacagccccacctccaggcacacaggaacacaggagggccccacttctaagagaatggag
gaggagaaagactgcaacagagaggaagaggacaagaatcctgactctcttccagatatt
tcagccccagacattgacgaaatccagacaacatcacacgttgaccccaccacttcaacc
gagggcggccagggcaggagctggtggtcaacggaaggctccccagaccctgactctgag
ctgccaggtcagccccagagctcccctcgctgggacttcagctccatccccttcccagac
ctgggctccagacgctggctccccagcagcctgacctccccagacccctgcctgctgccc
ggggctgtggggtcagtgggggcctgtgatgtggccccctggctgcagaggctcaacctg
cgggaggtgaggatgtcccggcgtgagtgggagagggagcgggacagggaccggtaccgg
agggacatcaaccaggacagagaggtacgacgttgcaggaactgggcagagtaccaggag
ctacaggagagaaggattcaacggagccgcagagataggccagcacacctgtgggagggg
ccggtcacacccctacatgaccctgcacaggtcacttcaactggtgagctgctggataaa
atcagtgtgatcaaatccacacggctgctggagggagcatccagtttgaaaggttcagag
gagtggagaatctgtttcaacatttaccaacccgacacggtcgctgaattcaagaagagt
gctcctggaaaaccctattctcgcatgtgtgtgtgcagtttcgatggtccagtgcctgac
ttgtggacactgaaattgctggctttccagagtggggatgtcccggtcacctatgcagtg
gtggaccacggggacatctccttctactccttcaaggacttccagatacccgcagacacg
tccttctga
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