Salvelinus fontinalis (brook trout): 129825428
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Entry
129825428 CDS
T11136
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129825428
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129825428
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
SALM family
129825428
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
129825428
BRITE hierarchy
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GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_1
ig
fn3
LRR_9
Ig_2
LRR_5
LRRCT
GP79
Motif
Other DBs
NCBI-GeneID:
129825428
NCBI-ProteinID:
XP_055741498
LinkDB
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Position
27:complement(29948113..30111408)
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AA seq
799 aa
AA seq
DB search
MDHILCCLLVLGTAVLLTHACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLG
GNYILRITQQDFANMTDLVDLTLSRNTISYIQPFSFSDLETLRSLHLDNNRLIELGPDDL
RGLVNLQHLILNNNQLGRISDRALEDLAPSLEDLDLSYNNLRSLPWDSVKLMVSLHQLSL
DHNLLDFIPEGTFTDLERLARLDLTSNRLQKLPPDPIFARAQDSVMMTTPYAPQLSLGIG
GNPLHCNCEVLWLRRLERDDDQETCASPSNLKGRYFWYVREEEFVCEPPLITQHTHRMLV
LEGQMASLRCEAIGDPTPTIHWMAPDDRVLGNSSRTVVYGNGTLEILITTSKDYGTFTCI
AANVAGESTASVDLSIIQLPHLSNGTGQASQPKSRLSDITGTTRISKGVPKTPPEKVVTV
SEVTAISALVKWTVSKAAPKVKMYQLQYNCSDDEVLIYRMIPASSQAFLVTNLVSGTKYD
LCVLAAWDDTATTLTATNVVGCAQFFTRDDYTQCQSLHSQFLGGTMILVVGGIIVATLLV
FIVILMVRYKATDHEGGGIGGSGKLTSVSDTHSQTNGGRLGQNGVPLTLPKPKAKVTLQD
EVVEFKCGSLQSTSSSSSSGGSVVGEGSYSPNSTLAIMWRQAAPSKPRANLDHLLGAFNS
LELRGAQGRGDLGEPSSSRSTPVAGGDRPHTDREPLLGRTMDSRLSRLLMLSHDSKPKRS
QSFDMGDCMDTDQQTDRAMASSTSTATTPVCSYPRRISNIWTKRSLSVNGMLLQCDEEGD
MGGSKGTFDSQEWVMESTV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatcctctgttgcctgctggtcctgggaaccgcagtgttgttgacccacgca
tgcccaaagtactgtgtgtgccagaacctgtccgagtccctggggaccctgtgtccctcc
aaaggcttgctcttcgtcccactggacatcgaccggcgcactgtggagctccggctgggc
ggaaactacatcctccgcatcacccagcaggactttgccaacatgaccgacctggtggat
ctgacgctcagccgcaacaccatcagctacatccagcccttctccttcagcgacctggag
accctgcgctccttacacctggacaacaaccgactcatagagctgggtcccgatgatctc
cggggcctggtcaacctgcagcacctcatccttaacaacaatcagttgggacgcatctcg
gaccgggccttggaagaccttgcaccctccctagaggatctggatctgtcctacaataac
ctgaggagcctgccctgggactcagtcaagctgatggtctccctccaccagttgagtctt
gaccataacctcctggatttcatccctgaggggacctttactgatctagagagactggct
cgcttggatctcacctccaaccgactgcagaagctgcccccagaccccatcttcgccagg
gcccaggattcagtgatgatgaccactccctacgccccccagctgtcccttggcatcggg
gggaaccccctgcattgtaactgtgaggtgctgtggctgcggcggctggagagggacgat
gatcaggagacatgcgcttccccttccaacctgaaggggcgctacttctggtatgtgagg
gaggaggagtttgtgtgcgagccacccctcatcactcagcacacccacaggatgctggtg
ctggagggccagatggccagcctgaggtgcgaggccattggagaccccacgcccaccatc
cactggatggcccccgacgaccgtgtccttggcaactcgtcccgaactgttgtctacggc
aacggcaccctggagattctcatcaccacttccaaggactacggtaccttcacctgcatc
gcggccaacgtggccggggagtccaccgcctcagttgatctgtcaatcatccagctgccc
cacctcagcaacggcaccggtcaggcctcacagcccaagtcccgcctctcggatatcacc
ggcaccaccaggataagcaagggggttccaaagacccccccggagaaagtggtcactgtg
tcagaggtgacggccatttcagccttggttaagtggaccgtcagcaaggcagcgcccaag
gtaaagatgtaccagctccaatacaactgttccgacgatgaagtcctcatctacaggatg
atcccggcctccagccaagccttcctggtgaccaacctggtgtcggggaccaagtacgac
ttgtgtgtcctggccgcctgggacgacaccgccaccaccctgacggccaccaacgtggtg
ggctgtgcccagttctttacccgcgacgactacacacagtgccagtctctccacagccag
tttctggggggcaccatgatcctggtggtgggtggcatcatcgtggcgacgctactcgtc
ttcatcgttatcctgatggtgcgctacaaggccaccgaccatgaggggggtggcatcggg
gggagcggcaagctgaccagcgtaagtgacacccactcacagaccaatgggggccggctg
ggacagaatggcgtgccccttaccctgcccaaaccaaaggccaaagtgaccctccaggat
gaggtggtggagtttaaatgtggttccctccagagcacctcgtcctcatcctcgtcgggg
ggctcggtggtcggggagggttcctacagccccaacagcaccctggccattatgtggagg
caggctgccccctctaagcccagggcaaacctggatcacctgctgggggccttcaactcc
ctagagctccggggggcccagggcaggggagacctgggtgagccctcatccagcaggagc
actccggtggcgggtggcgataggccccacacggacagggagcccctgctgggccggaca
atggactcgcggctgagccggctgctcatgttgtctcatgactcgaaaccaaaaaggagc
cagtcgtttgacatgggggactgtatggatacagatcaacaaacagaccgagcaatggcc
tctagcacctccactgccacaacgccggtgtgcagttacccgcggcgcatcagcaacatc
tggactaagaggagcctgtctgtgaacggcatgctgctacagtgtgacgaggaaggggat
atgggggggagcaaggggacctttgacagccaagagtgggtcatggagagtactgtctag
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