Salvelinus fontinalis (brook trout): 129825517
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Entry
129825517 CDS
T11136
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129825517 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129825517 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129825517 (srsf5b)
Spliceosome [BR:
sfon03041
]
Common components
Common spliceosomal components
SR proteins
129825517 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
129825517
NCBI-ProteinID:
XP_055741646
LinkDB
All DBs
Position
27:37146632..37153989
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AA seq
325 aa
AA seq
DB search
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRRTNQPSGQPAD
RNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLK
NALEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRSRNRSPSRSRTPRRSRSH
SPKSRSPKRDYNRSRSRSHSGSPAPRAAAPGSPPPRAKETSSSSKRPSKPSKSASPHSPP
PAQRAPSRSPSRSRGSRSPSTDSRH
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgcatatttgtcggccggttaaacccgtccgccagagagaaggacgtg
gagagattcttcaaaggatacggccgcatccgagacatcgacctcaagagaggctttggt
tttgtggagtttgatgaccctagggatgctgaggatgcagtttatgagttggatggcaag
gagctctgcaatgagagggtgaccattgagcatgctcgtgtgcgcctgcgtggtgggcgg
ggacgtggtggtgacagaggaggaggagggggaggaggaggaggccgcttcccagatcgc
tatggccgtggctcccaggatagtcggaggaccaaccaaccaagtggacaaccggcagat
aggaaccccccgccgatgcgtacggagaaccgtctcatcgtggagaacctgtcatctcgc
gtcagctggcaggacctgaaggatttcatgagacaggctggggaagtcacgtttgcagac
gcccaccgccccaaactcaacgaaggagtggttgagttcgcttcttacagtgatctgaaa
aacgcccttgagaagctgtctggcaaggagatcaatggaaggaaaatcaagctgattgag
gcagcaaagaagaggggttccaggagtcgttcccgctctgagagctcttctcgttcacgc
tcccgttctcgtaaccgttccccgtcccgctccaggaccccccgtcgttccaggtcccac
tcccccaaatcccgctcccccaagagggactacaaccgctctcgttctcgttcccacagc
ggctccccagccccccgtgctgctgcccctggctccccacctcccagggccaaagagacc
tcctcctcctctaaacggccctccaagcccagcaagtctgcctccccccactcccctccc
cctgcacagcgtgcaccttccaggtctccttccaggtctcgtggctctcgctctccgtct
acggacagccgccactga
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