Salvelinus fontinalis (brook trout): 129825883
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Entry
129825883 CDS
T11136
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129825883 (tmc1)
03037 Cilium and associated proteins [BR:
sfon03037
]
129825883 (tmc1)
Transporters [BR:
sfon02000
]
Other transporters
Pores ion channels [TC:
1
]
129825883 (tmc1)
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129825883 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Piezo_TM1-24
COX16
Toddler
Motif
Other DBs
NCBI-GeneID:
129825883
NCBI-ProteinID:
XP_055741981
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All DBs
Position
28:complement(8247764..8262345)
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AA seq
940 aa
AA seq
DB search
MFQISIGLEDADEEDTVIDSDGRQERAKEMERKKERHRKRRRNVARRASSARKEGKELED
RPEREERRGRKKRDKEGKGKGKGGEDERQEEVKNDTVEKIQKNFSNENTRNLEQKEIEVV
GEEDGDTEGKRKNGHSKKDEKKEDNGRGEKVEKKQKKRRVETSSEHESSEEEEDEEEKEG
EEKPEVLSPEELEKLKEEVDERKKLISTLRGKPWPMRKKLLTLRESHEFVEKYEGALGKG
KSRKLYAYKVMMLKKWMKFQRDFENFKTACVPWEMKIKEIESHFGSSVASYFIFLRWMYG
INMILFGLTFGLVMVPEALMGRPYGSMPRKTVPRADEANAMDFAVLWDFGGYAQYSVLFY
GYYNSQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANEDGGGDNNNFNFSWKM
FTSWDYLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTRFLRVLANFLVLCCLA
GSGYLIYFVVRRSQKFALEGLESHSWWERNEVNMVMSLLGMFCPMLFDVISALENYHPRI
ALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEEVLKLNMTMWEASLYNGTLGANSTA
PPITVHPADIPRGPCWETMVGQEFVRLIVSDTMTTYITLLIGDFLRAVLVRFLNYCWCWD
LEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCN
VPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKSRMFDVIQET
LESDFPAWFGKVFSYASNPGLVLPFLLLMVLAIYYLQSTSKSYKQANLELKKKLQTQNEE
NKKKTKIAALKAAMDLEEAQNARSEAPRQQRNNNASQQSYRDRERKGEEHRTHQGKSDHQ
IPPSATSPPAPRGHRIPGPLPGNQRQPAPSVQRVPNSQRH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagatcagcattggcttggaggatgcagatgaagaggacacagttattgactct
gatgggaggcaggagagggcaaaagagatggagagaaagaaagagaggcacagaaagaga
agaagaaatgtagcaagaagagcttccagtgcaagaaaagaaggaaaggaattggaggac
agaccagaaagagaggagaggagaggacgaaaaaagagggataaggaggggaaagggaaa
gggaaagggggagaggatgagaggcaggaagaagtaaagaatgacacggttgaaaaaatt
caaaagaatttcagcaatgaaaacaccagaaatctggagcaaaaagagatagaggttgta
ggagaggaggatggggataccgaggggaagaggaaaaatggacactcaaaaaaagatgag
aaaaaggaggacaatggaagaggagagaaagttgagaagaaacagaagaaaagaagggtt
gagacaagttcagaacatgagtcatcagaggaagaggaggatgaggaagagaaagaggga
gaggagaaaccagaggtcttgtctcccgaggagttggagaagctgaaggaggaagtggat
gagaggaagaaacttatctcaaccctaagaggaaagccttggcccatgaggaagaaactg
ctaactctacgggagtcccatgagtttgtggagaaatatgagggagctcttgggaaaggg
aagagcagaaaactgtacgcatataaagtcatgatgttgaagaaatggatgaagtttcag
agggactttgaaaacttcaaaactgcttgcgttccatgggagatgaaaatcaaagagatt
gagagccattttggctcctcggttgcctcctacttcatattcctgaggtggatgtatggc
atcaacatgatcctctttgggctgacgtttggcctggtcatggtgccagaggctctgatg
ggcaggccgtatggtagcatgcccagaaagactgtccctagagctgacgaagccaacgcc
atggactttgctgtcctatgggactttgggggctacgcccagtattctgtcctcttttat
ggctactacaacagccagcgcgctattggctggctcaagttccgcatgcccctctcctac
ttcctggttggcgtgggaactgtggcctatagctatatggtggtgataaggactatggcc
cggaatgctaatgaggacgggggcggagacaacaacaacttcaatttcagctggaagatg
ttcaccagctgggattacctcatcggcaaccctgagacagccgacaacaagtttgcctcc
atcaccaccagctttaaggaggccattctggaggaacaggagagcaggaaggatgacaac
atccacttgacccgttttctgcgggttctggccaacttcctggtgctgtgctgtctagca
ggaagtggctatctcatctactttgtggtgcgtcgctcccagaagtttgctttagaggga
ctggagagccatagctggtgggagaggaatgaggtgaacatggtgatgtccctcctgggg
atgttctgtcccatgctgtttgatgtgatcagtgcactagagaactatcacccccgcatt
gctctacagtggcagctgggacgcatcttcgccctgttcctggggaacctttacaccttc
atcatcgcactcatggatgagatcaacctcaaacgggaggaggaggaggtgctgaagctt
aatatgactatgtgggaggccagtctgtacaatgggaccttgggagcgaatagcacagct
cctcccatcaccgtccaccctgccgacatcccacgaggaccctgctgggaaaccatggtg
ggacaggagtttgtccgactcattgtgtcggatactatgacaacctacatcacgctgctg
atcggtgacttcttgcgtgctgtgcttgtgcgtttcctcaactactgctggtgttgggac
ttggaggctggatttccctcctactcagagttcgatgtcagtgggaatgtcctgggcctg
atcttcaaccaaggcatgatatggatgggtgcgttctatgccccctgcctgcctgctttg
aacgtgctgagactgcatgtgtcaatgtacctgcagtgctgggccgtcatgtgctgtaat
gttcctcaggagagggtgttcaaggcctcaggctccaacaacttctacatggccatgcta
ctggtcatcctcttcctctcaacgctgcccgccatctacaccatagtcactatccccccc
tccttcgactgtggccccttcagtgggaaaagccgcatgtttgatgtgatccaggagacg
ctggaatctgatttccctgcctggtttgggaaggtgttcagctacgcctccaaccctggc
ctggtgctgcctttcctactgctgatggttttggccatttattacttgcagtctacatcc
aaaagctacaagcaagccaacctggagttaaagaagaaacttcaaacccaaaatgaagag
aacaagaagaagactaaaattgcagcactgaaagctgctatggatttagaggaggctcaa
aacgctcggtcagaagcaccgcggcaacagagaaacaacaacgcctctcagcaatcttat
agggacagagaaaggaagggtgaggaacacagaacacatcaaggaaaaagcgaccatcaa
attcccccttctgccaccagccccccggccccgaggggccacagaatccctgggccccta
ccaggtaaccagcggcaaccagcacccagtgttcagagggtcccaaactcccagagacac
tga
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