Salvelinus fontinalis (brook trout): 129825949
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Entry
129825949 CDS
T11136
Name
(RefSeq) semaphorin-6A-like isoform X1
KO
K06842
semaphorin 6
Organism
sfon Salvelinus fontinalis (brook trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
129825949
NCBI-ProteinID:
XP_055742079
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All DBs
Position
28:2212179..2310486
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AA seq
1012 aa
AA seq
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MRSEALLLYFTLLKIARAGFPEDSEPISISHGNYTKQYPAFFGHKPGRNNTQRHKLDIQL
IIIMNRTLYIAARDHIYTLDTDTANSEEIFFSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNDDTLFVCGTNAFNPSCRTYKMDTMEHLGEEISGMARCPYDAKHSNIALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKCLKEPYFVQAVNYGDFIYFFYREIA
MEYNTMGKVVFPRVARVCKSDRGGSQRVLEKQWTSFLKTRLNCSIPGDSHFYFNILQAVT
DVIHINGRDVVMATFSTPYNSIPGSAVCAYDMAEVANAFMGRFKEQKSPDSTWTPVPEDK
VPKPRPGCCAGSSSLEKYKVSNEFPDDTLNFIKQHPLMDEAVPSIANRPWFLKTMVRYRL
TRISVDNAAGPYRNHTVVFLGSEKGIILKFLAKMNSGLLNDSLFLEELNVYNPEKCSIDG
VDDKRIVSMQIDNQGHSLFVAFTSCVVKVPLSRCERHGKCKKSCIASRDPYCGWVSEGAC
RQVVLDPKSAFEQDVEHGNTDGLGDCQNTFVALNDVQSSPHGHERARYGHPTLPFPTTAH
PPAGGPLGRGGMVEQADTPMPSDNRDPYMAVPSQTQQDANGVIRESYQKGRDQLVPVTLL
AIAVILAFAMGAIFSGILVYCVCDHRRRDIELSGSKDKDHDRRGSMNSVTKLTGLFETGA
KDSRPEAILTPLMHNGRLTNGKILIKADQHHLDLAGMPTPESTPMQPRRKPSRGSREWER
NQNLINACTKDLQTMGTPVIPTDLPLRASPGHIPSVVVLPLPQHQHQQPYQHEYVEQPHR
SDLSQMSLSDQGATLEYKALKSPCPSLNLVESDGLPPRVPQREASLTIPPAVPQMGKRLE
VHSSVYGHEYKRGYPMSAQKGSALKKHNTNSSNSSHLSRHQSFNHVESPPPAPQRVDSMH
MNSQGMFHSRQPSMSSYGSLPRTGVKHLKPDVPPKPSLVSLSTKVNSNDSCT
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaggccttgttgctgtatttcacgctgctgaagatcgcaagggctggcttc
ccggaagactctgagccaatcagtatttcacatggcaactatacaaagcagtatccggct
ttctttggacacaaacctggaagaaacaatacacaacggcacaaactggatatccagctc
atcataataatgaaccgaacgttgtatatcgctgccagggatcacatatacacgctggat
acagacaccgccaactccgaggagatctttttcagcaagaaactgacatggaagtccaga
caggcagatgtggacacctgccgtatgaaggggaagcacaaggatgaatgtcacaatttc
atcaaggtcctcctgcagcaaaacgatgacaccttgtttgtgtgcggaacaaatgctttc
aacccctcctgtagaacgtacaagatggacaccatggaacatctaggggaggagatcagt
gggatggcgcggtgcccatacgatgccaaacactctaacatcgccctgtttgcggatgga
aagctctactccgcaacagtaacagatttcctagcgattgatgcagtcatttatcgtagc
cttggagatagcccaactttgcgcactgtcaaacatgactccaagtgtctcaaagagccg
tattttgtacaggcagttaactacggtgacttcatctacttcttctatcgagaaattgcc
atggagtacaacacaatgggaaaggtggtgttcccccgtgtggccagggtgtgtaagagc
gaccggggcggctcccagagagttctggagaaacagtggacgtccttcctgaagacccgt
ctcaactgctccatcccgggagactcccacttctacttcaacatcctgcaggccgtcacc
gacgtcatccacatcaacggacgcgacgttgtcatggcaaccttctccacaccttacaac
agcattcctgggtcggctgtctgcgcctatgacatggctgaggtggccaatgcgttcatg
ggacgtttcaaagagcagaagtcccctgattccacctggacacctgttcctgaggataaa
gttccaaaaccaaggcccgggtgctgtgctggctcttcgtccttagagaagtacaaggtg
tccaacgagttccctgacgacaccctaaacttcatcaagcagcaccctctcatggatgaa
gctgtgccctctatcgctaacaggccctggtttctcaagaccatggtgcgataccggctc
acccggatctccgtggacaacgctgcgggaccctatcggaatcacactgtcgttttcctg
ggctcggagaaggggatcattctgaaattcctggccaagatgaacagcggtttgctgaat
gacagtctctttctggaggagctcaacgtgtataacccggagaagtgcagcatcgacggt
gtggacgacaaacgtatcgtcagcatgcagatcgacaaccagggccactctctgtttgtg
gccttcacctcctgtgtggtcaaggtgccgctctctcgctgtgagaggcatggcaaatgc
aagaaatcatgtattgcctccagagatccctactgcggctgggtgtccgaaggagcgtgc
agacaggtggtgctcgacccaaaatcggccttcgagcaggacgtggagcatggcaacaca
gatggactgggagactgccaaaatacgtttgtggccctcaacgatgttcagtccagtcct
catggtcatgaaagggctcgctatggccatcccactctcccattccccaccacggcccat
ccccctgcaggaggaccactgggtcggggcggcatggtggagcaggcggacacccccatg
ccctcagataacagggacccctatatggcagtgccctctcagacccagcaggatgccaat
ggagttatacgcgagagttaccagaaggggcgtgaccagctggtccctgtcacactgctg
gccatcgctgtcatcctggccttcgccatgggtgccatcttctctggtatcctcgtctac
tgtgtgtgtgaccaccggcgacgagacattgagctgtctgggagtaaggacaaagaccat
gacaggaggggctccatgaacagcgtgaccaagttgacaggcctgtttgagaccggggcc
aaggacagtcgccctgaagccatcctcaccccgctcatgcacaacggccgcctcaccaat
ggtaaaattctgatcaaagccgaccagcaccacctggacctggctggcatgcccacccca
gagtccacccccatgcagccccgacgcaagcccagccggggaagccgcgagtgggagagg
aaccagaatctgatcaatgcctgcaccaaggacctgcaaaccatgggcaccccagtcatc
cccactgacctgcccctgagggcctccccaggccacatccccagtgtggtagtgcttccc
ctgccacagcaccagcatcagcagccctaccagcatgagtatgtagagcagccccaccgc
agcgacctcagccagatgagcctgagtgaccagggtgccacactggagtacaaggcccta
aagagcccctgccccagcctcaacctggtggagagcgacggactgccgccccgagtgccc
caaagggaggcctccctcaccatcccccctgccgtgccccagatgggcaagcggctcgag
gtgcactcctccgtctatggccatgagtacaagcggggctacccgatgagtgcccagaaa
ggctctgccctcaaaaagcacaacaccaactcatccaactcctctcacctgtccagacac
caaagttttaaccacgtggagtcgccgccccccgccccacagagggtggactccatgcac
atgaattcccaggggatgttccactcccgacagcccagcatgagctcttacggttcgttg
ccccggaccggggtcaaacacctcaagcctgacgtaccgcccaaaccctctttagtgtcc
ctctcaacgaaagtcaattccaatgactcctgcacataa
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