Salvelinus fontinalis (brook trout): 129825980
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Entry
129825980 CDS
T11136
Name
(RefSeq) myocyte-specific enhancer factor 2C-like isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129825980
04371 Apelin signaling pathway
129825980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129825980
Transcription factors [BR:
sfon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
129825980
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
129825980
NCBI-ProteinID:
XP_055742152
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Position
28:complement(4584958..4678558)
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AA seq
478 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKI
NEDIDLMISRQRLCQGVPPSNYEMPVSIPVSNQNSLIYSHPGGSLGNHNLLPLAQHMQRT
SMSPGVTHRPASAGGLMGADLTTGAVTSAGNGYGNHHRNSPGLLASPGSMNKSMQAKSPP
PMNLGMNNRKPDLRVLIPPGAKNNMPSMSEDVNLLLNQRINNSQSAQSLATPVVSVATPT
LPGQGMGGYPSAISTSYGTEYSLSSADLSSLSGFNSGSSLHLGSMSGWQQQHLQNMQHSA
LSQLGNCNSNHLCQSSNLSMPSAQSLHIKSEPVSPPRDRTSSTPLCYGIHQQHNPSSRQD
SGHSPVDSLSSCSSSHEGSDRDEHRNEFHSPLGLSRPAMDERESPSVKRVRLSEGWAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacgcggattatggatgaacgcaacagacaggtgaca
tttacgaagaggaagtttggcctgatgaagaaggcgtatgagctgagcgtgctgtgtgac
tgtgagatcgccctcatcatcttcaacagtaccaacaagctgttccagtatgccagcacc
gacatggacaaggtgctgctcaagtacacggagtacaacgagccccacgagagcaggacc
aactctgatatcgtggagacgttgagaaagaagggtctaaacggctgtgacagccctgac
cccgacgcagacgactcggtcggccacagccccgagtctgaggacaagtacaggaaaata
aatgaagacattgatctgatgatcagcagacagagactgtgtcagggtgtgcccccctcc
aactacgagatgccggtgtccatccccgttagcaaccagaacagtctcatctacagccac
ccaggaggttccctaggcaaccacaacctgctgcccctggcacagcacatgcagaggacc
agcatgtcccccggtgtcacacacagacctgccagtgcaggtggcctcatgggtgctgac
ctcaccactggtgcggttaccagtgctggcaacggctacgggaaccaccaccgtaactcg
cccggtctgctggcctctccgggtagcatgaacaagagcatgcaggccaagtctccccca
cccatgaacctgggcatgaacaaccgcaagccagacctgcgcgtgctcatccccccagga
gccaagaacaacatgccctccatgtctgaggatgtcaatctgctattgaaccagagaata
aacaactcccagtcagcacagtcattggccacccctgtggtttcagtagcaacgcccacc
ctaccaggacaaggcatgggcggttacccatcagccatctccacttcatacggtactgaa
tactcgctgagcagtgcagacctatcctccctgtccggctttaacagtggtagctccctc
cacctgggctccatgagcggttggcaacaacaacacctccagaacatgcagcattcggcc
ctcagtcagctaggaaattgcaatagcaatcacttatgtcagagttcaaatctctccatg
ccttctgctcaaagcctgcacatcaagtccgaacctgtttctcctcctagagatcgcacc
agtagcacgccgttgtgctacggcatccatcagcaacataacccgtcgtcccgccaggac
tcgggccactcccccgtcgacagcctgagcagctgcagcagctcccacgagggcagcgac
cgggacgagcataggaacgagttccactctccactgggactgtctcggcccgccatggac
gagcgcgagagtccctcggtcaaacgtgtgcgcctgtccgaagggtgggccacatga
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