Salvelinus fontinalis (brook trout): 129825994
Help
Entry
129825994 CDS
T11136
Name
(RefSeq) snRNA-activating protein complex subunit 4-like isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129825994
03021 Transcription machinery [BR:
sfon03021
]
129825994
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
129825994
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
129825994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-binding_2
HTH_CHD1_Hrp3
SLIDE
Motif
Other DBs
NCBI-GeneID:
129825994
NCBI-ProteinID:
XP_055742198
LinkDB
All DBs
Position
28:complement(6171881..6199498)
Genome browser
AA seq
1404 aa
AA seq
DB search
MSSDDLLAQRENVERQILVLERSLGPESNSIELSSDSCSSDDGSDDNASQPEDLGPPGNL
EAEREQIQREIEELECTLGPNASNAEILSDEEVQGSETESSKEDSAEELDLPQNTDTCLQ
MNLVYQEVLKEKLEELERLLSDNQHQQKEIMTQLSGTGTPQATTSGQPTLKLFLGSFLKP
YFKDKVTFLGPPANPEAKEKMSKRIGPTDDVKMKRWEGWQKTLLINAVMKDSMKRMIQPK
LSKVEYLTQKMVNAENVEKQILRKQITEIEKDIQAISALKEDDLMGGRYDEHDWQKISNI
DFEGIREAEHIKSFWQNYLHPSINKASWKENEIEMLKKVAVKHGHHNWDQIADKLGTNRT
AFMCLQTYQRYICTDFRRRGWGSVEDEILRELVEKMRIGNYIPYTQISYFMEGRGSCQLM
YRWTQVLDPTLKKGYWSKEEDEMLLRAVAKHGVGNWWKIRQDVPGRNDGQCRDRYVDVLV
GNVKKGPFDEKEKAQLRLLVEKYGRKWSKIAAEIPNRIDSQVLHQWRKMTGYKPRQRDRR
KRSLQRTRKVAAVRSIKSKLMRLDDDVHSSSDEEENVEFEFMDSDDEKKQKFIEPHWSDQ
ESDIIKDYTQPDMEQWIPVLEKEFEGLGKVRSMMVERPSKNTAQEQATTASQDAAGKVVV
VRSTILDRFDKPAATVIGQNPPILAKKDYNSDLAMLKVCYGEVRNLIAWKKTNARKHKNS
GSMSGEQGTANKSSRQKESSANSETCITLNYSLQLAVTPWVGNVLMPPPPSSNKRREADM
VRERAESIGLTNSPVFVFFLQVLRLDAEGCKQIIKMRNNQVVLMGNKSWEVKPVFLASLK
NPKQRHGPRTVASMLNQKGNEQQNSKQQNSQLVMIPQTFVIAPPVVQSIPHPAVPSTPTS
RQQLMPSALTQLRPSTPSRPIPSTPGQPVLSTPSLPIPSTTNQPILPAPLSLSNQSSTTI
DRVNEEANENHSGKKRNRKPTEKAQALKDAAIAKKSVEESPKRKKARTKESLVVQSNVVM
PPPQTAWAMMPIVLVPISGIGIQMTPQNLPRNALAPACPSPIIINQQVPLTRNAAATQAS
PNMTYVCPSPSTPKDPSALMVSPASSIAQGTASPSVLTSLSTSITITSNTGLRMTNPGKR
MRITNPVMQTVATTCPQLNAVSPVPMNMVISAPIRPQTGHPQALVLNVPPGSLPASFPQG
GGLRIVQLNQPKSVPPPRNPELMQFDPNLMFTEDPAQVREWLSGKQGVALPDLDVTLPYL
PPFVSSLNTLSGLLKCKKTLAVRAMQLLPPEEKESQEEQQQVAAVRSFVAERFSHNPGYL
LLKARFLSCFTMPALLATINPVKLSKSPTSDHSDVEEEPFRNRPVEQTTLQAPLLSTDGK
GPPATSFSGITTRNKSRNLNTNTE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggatgaccttcttgcacagagggagaacgttgaacgccagattttggtgctc
gagcgcagccttggtcccgaaagcaactccattgaactatcttcagacagttgttcatct
gatgatggatcagacgataatgcatctcaaccagaagatttgggtcctccggggaacctg
gaggcagagagggagcaaatacagagagagattgaagagttggagtgcactcttggccca
aatgcatctaatgctgagattctgtcagatgaggaggtccaaggaagtgaaacagaatcg
agcaaagaggacagtgctgaggagctggatctaccccagaacacagatacatgtctgcaa
atgaaccttgtttaccaggaagtgttgaaagagaaattagaggagctggagcgactgtta
tcagacaatcaacaccaacaaaaagagattatgactcagctatctggcacaggaactccc
caggctaccacatctggacaacccacactgaagcttttcttggggagctttctgaagccc
tatttcaaagataaagtcacatttctgggcccacctgctaatccagaagccaaagagaag
atgagtaaaaggatcggacccactgacgacgtcaagatgaaaagatgggaagggtggcag
aagactctgctgataaatgctgtcatgaaagacagcatgaaacgcatgatacagcccaag
ctgtccaaggtggaataccttacacagaaaatggtcaacgctgaaaatgtggaaaagcaa
atcctgcggaaacaaatcactgaaattgaaaaggacattcaggccatcagtgcactgaag
gaggatgacctgatgggtggccgctatgatgagcatgattggcaaaagatttccaatatt
gattttgaaggcatccgtgaagctgaacacataaaaagcttttggcagaactacctgcat
ccctccattaacaaagccagttggaaggaaaacgaaattgagatgctcaagaaagtcgct
gtaaaacatgggcaccacaactgggatcagattgctgataaacttgggaccaacaggaca
gccttcatgtgtctccagacgtaccagcgctacatctgcaccgacttcaggaggaggggg
tggggcagcgtggaggacgagatccttcgagagctggtggagaagatgcgtatcgggaac
tacatcccgtacacccagatctcctatttcatggagggccggggttcatgccagctgatg
tatcggtggactcaggttctagaccccaccctcaaaaaaggctattggtctaaagaagaa
gatgagatgctactgagagcagtggctaaacacggggtggggaactggtggaaaatccgt
caggatgtgcctggcagaaatgatggccagtgtagggacaggtacgtggacgtcctggtt
gggaacgtgaagaaggggccctttgacgagaaggaaaaggcacagctcagactattggtg
gagaaatatggacgtaaatggtctaagatagctgccgagattcccaacagaattgacagc
caggtccttcaccagtggaggaaaatgaccgggtacaagcccagacagagggacagaagg
aaaagatcattgcagcgaacgagaaaggtcgcggctgtgaggagcatcaagagtaagttg
atgaggctagacgatgatgtgcactcaagctccgacgaggaggagaacgtcgagtttgag
tttatggacagtgacgacgagaagaaacagaagttcattgaaccgcactggtctgatcag
gaaagtgacattatcaaagactacacccaaccagacatggagcaatggatccccgtgcta
gagaaggagtttgaagggctggggaaggtgaggagcatgatggttgaacggcccagcaag
aacacagcgcaagagcaggcaacgacggccagccaggatgcagcaggcaaggtcgtagtg
gtacgttccaccatcctggaccgctttgataagcctgctgccactgtcatcgggcaaaac
cccccaatactagcaaagaaggattacaacagtgacctggccatgctgaaggtgtgctac
ggagaggtgagaaacctgatcgcttggaagaaaaccaatgccagaaaacacaaaaacagt
gggtctatgagcggtgaacaggggacagccaacaagtcctcaagacaaaaggagtcctct
gccaacagtgaaacctgcatcactctcaactattcccttcagttggcagtcactccctgg
gtgggcaatgtgcttatgcccccaccaccctcttcaaacaagcgccgtgaagcggacatg
gtgcgagagagagcagagagcattggactcaccaatagcccagtgttcgtgttctttctg
caggtcctccgtttagatgcagaaggctgtaagcagatcattaaaatgcgtaacaaccaa
gtggtactcatgggaaacaaatcttgggaagtgaaaccggtttttctagcttcattgaaa
aacccaaagcaacgccatggtcccagaacagtggccagtatgctaaaccagaagggaaac
gagcagcagaacagtaagcaacagaacagtcaacttgtgatgatccctcagacctttgtc
attgcaccgcctgtagtccagtccatcccacatcctgcggtcccctccactccaacttcc
agacaacaactcatgccttccgcacttacccaactcagaccctctacccccagtcgacct
ataccctccacacctggtcaacctgtactctctacccccagcctacccataccctcgacc
accaaccaacctatactccctgctcccctctccctttccaaccaatcctcaactacaata
gaccgggtgaatgaggaggctaatgagaatcattcaggaaaaaaacgcaatcgtaaacct
actgagaaagcacaggccctcaaggatgctgcgattgccaaaaagtctgtggaagagtcg
cccaaacgcaagaaagcccgtaccaaagagagcctagttgtccagtctaacgtggttatg
ccccctccacaaactgcctgggccatgatgcccattgtacttgtgccaatcagtggcatt
ggcatccagatgacacctcagaatctaccacgaaatgctcttgcacctgcttgtccatct
cctattattatcaaccagcaagtccctctaacacgaaatgctgctgcaacacaggcctct
cccaatatgacctatgtctgcccatctccctctacacctaaagacccatctgccctcatg
gtatctcctgcctcatccatagcacaggggactgcctccccatctgttttaacctccctc
tccacctccattaccatcacaagcaacactggtctaagaatgaccaacccagggaaacgc
atgagaataaccaacccagtcatgcagactgtggcaaccacttgtcctcagctcaatgca
gtttcacctgttcccatgaacatggtcatctcggctcccatcagaccacagactggccat
ccacaggctttagtcctcaacgtccctccaggctcccttccagcctcattcccacagggg
ggaggcctccgaatcgtgcagcttaaccagcctaaaagtgtccctccaccccgcaatccg
gagctaatgcagtttgatcccaacctgatgttcacggaggacccggcacaagtgagagag
tggttgagcggcaagcaaggagttgcgcttccggatttggacgtcactctgccctaccta
cccccctttgtcagcagtcttaataccctatcgggtctcctgaaatgtaaaaagacgttg
gcagttcgtgcaatgcagctcctgcccccagaggagaaagagagccaggaagagcagcag
caggtagctgcagtgcggagctttgtggcagagcgctttagccataacccaggctacctg
ctcctgaaggctcgcttcttgtcctgtttcaccatgcctgctcttttggctactatcaat
ccagtgaaactctccaagtcccccacctcggaccacagtgatgtggaggaggaacctttc
aggaaccgtccagtggagcagacaacactccaggctcctctgctaagcactgacggaaaa
ggacctcctgccacctccttctctggaatcaccacaagaaataaaagtcgcaacctcaac
acgaacacagagtaa
DBGET
integrated database retrieval system
