Salvelinus fontinalis (brook trout): 129826007
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Entry
129826007 CDS
T11136
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03030
DNA replication
sfon03410
Base excision repair
sfon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129826007 (pole)
03410 Base excision repair
129826007 (pole)
03420 Nucleotide excision repair
129826007 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfon03032
]
129826007 (pole)
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129826007 (pole)
Enzymes [BR:
sfon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129826007 (pole)
DNA replication proteins [BR:
sfon03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
129826007 (pole)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
129826007 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
129826007
NCBI-ProteinID:
XP_055742232
LinkDB
All DBs
Position
28:complement(6376160..6401273)
Genome browser
AA seq
2291 aa
AA seq
DB search
MVLQNSGRYKSERGQGGDQDNQQDDRSSMSAAIRLERSQFTDEMDTRFGFERMKDPGEKT
GWLINMHPTEILDDDKRMVSAVDYYFIQEDGSRFKVPLPFKPYFYIATKKNCEREVISFL
SKKFQGKVAKLEMLPKEDLDLPNHLVGLKRSYIKLSFNTVDDLMKVKREISPAVRKNRER
EKSNDTYTSMLSSALAGGSVSAADEDGMSKKTSDQMDNIVDMREYDVPYHMRLSIDLKIH
VAHWYNVRYRGSAYPPEIILRSDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEAGLIQRWFEHVQETKPEIF
VTYNGDFFDWPFVETRAAHHGLNMYREIGFQKDNQGEYRASQAIHMDAFRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEESQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEETLRHAIEEEEKIPLEQVANFNEV
CDEIKKKLISLKEVPNRIECPLIYHLDVAAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GANCQRKMSWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGRPRAFHELNLEEQARHE
KKRLGDYCRRAYKKVRQTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQESGDAALVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELVEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYDSVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGEQKSNTISTAKRLAEFLGDQMVKDAGLSCRYI
ISRKPEGTPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHHA
LEAGQAADIEDFGMPARPLQPAILISTKRKRVSQGENSQAVESQEMELTQSWREILGPPP
PTGETQEARLVWLRYHKKKWELQLRQRKERRKRRRLLDGEVQAMGGGVIRDAGPATGLGS
FLRRTARSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQEE
GATYKKVNRLLPRSNIVYYLYQYSVPEDMYQEHLNEINADLSAPDIEGVYETQVPLLFRA
LVQLGCMCMVNKQLVRDLGGREAETYDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHK
ALFGLFIPSQRKASIFVLDTVRSNQMPNLNTLYGAERTALLEKTSEELLPPEKHTFEVRA
ENDVKAIHRALQRILLSYKGERRGPTLIAVQSNWELRRLVAGMPVLEEFPVVPVHVVDEI
SYNVLDWQRHGARRMVRHYLNLDSCLSQAFDMARYYHLPVGNLPHDVSIFGSDLFLARHL
RKHNHLLWLSPTARPDLGGKEADDSRLVMEADDRGSMEINAQGCYSTVCVELDLQSLAVN
TILQSQHVNDMEGGASLGVSFDVIQQASLEEMMSGNQGASAVASYDETALCSNTFRILKS
MVVGWVREITRYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFK
RLGSTVVYGNFNRILLCTKKRRIDDAISYVEYITNSIHSREIFHSLSISFSRCWEFLMWM
DLANYGGVKGKLPSSVLYGENGTAQKKGKEDGEEEGSEDEEEAEEEDGAGEVDEVEELIE
SSWNIMQYLPQTASCQKYFLMIISAYIAAIYHSMREELRRNAPGATPVKRRGGSQTSQQA
AGDSTALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVTQPSEMFPVLPGSHLPL
SNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPEVI
CHHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQTQYETESIEMALVEALQKKLMSYTLQ
DLACAKCKGVKEANMPLYCTCAGDFELTFPTKSFSEQIKVFRNIAAHYNMNFLEETIDWL
LVMSPQISQSR
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagtggacggtacaagtcagagagaggacaagggggtgaccaggac
aatcaacaggatgaccggtcatccatgtcggctgctatccggctggagcgcagccagttc
actgacgagatggacacccgcttcgggttcgagaggatgaaggacccaggagagaagact
ggctggctcatcaacatgcaccctacagagattctggacgatgacaaacggatggtcagc
gctgtggactattatttcatccaggaagatggcagcaggttcaaggtacccctccccttt
aagccctatttctacatagccactaaaaagaactgtgagagagaagtcatttcattcttg
tccaagaagttccaagggaaggtggcgaagctggagatgctccctaaggaggacctggat
ctgcccaatcacctggtgggactaaagaggagctacatcaagctttcattcaacactgtg
gatgacctcatgaaggtcaaacgggagatctcgccggcggtgcgcaagaatcgggagagg
gagaagtccaacgatacctacacctcaatgttatcaagtgcgttggcaggaggcagtgtc
tcggcagcggatgaagatggcatgtccaagaaaacctccgaccagatggacaacatagtg
gacatgagagagtacgacgtgccttaccacatgcgcctgtccatcgaccttaagatccac
gtggctcactggtacaacgttcggtacaggggtagtgcataccctccggagatcatactg
agaagcgacctggtggaacgaccagacccagttgtgctggcctttgacatagagaccacc
aagcttcctctgaaattccctgatgcagaaacggaccagattatgatgatatcctacatg
atcgacggacagggctacctcatcacaaaccgagagattgtctctgaggacattgaggac
tttgagttcacccctaagccagagtacgagggacccttcactgtattcaatgagcctgac
gaggcgggtctcattcagcgatggttcgagcacgtccaagaaaccaagcccgaaatcttt
gtcacctacaacggagactttttcgattggccctttgtggagaccagggctgcccaccac
ggcctgaacatgtacagagagattggcttccagaaggacaaccagggcgagtacagggct
agccaggccatccacatggacgcctttaggtgggtgaagcgtgacagctacctgccggtg
ggcagtcacaacctgaaggcggcggccaaggccaagctgggctatgacccagtggagctg
gaccccgaggagatgtgccgcatggccacagaggagtcacagactctggccacttactct
gtgtcggatgccgtggccacgtattatctttacatgaagtacgtccaccccttcatcttt
gctctttgcaccatcatccctatggagccagatgaggtgctgcgtaagggttcggggacc
ctgtgtgaggcgctgctcatggtgcaggcctaccatgccaacatcgtcttccccaacaag
caggagcaggtgttcaacaagctgacagacgatggccacgtcatggactctgagacctac
gtggggggtcacgtggaggccctggagtccggcgtgttccgcagcgacatcccctgccgc
ttcaaaatgaatccggcggcattcgacttcctgcttcagcgggtggaggaaacgctgcgt
cacgccatcgaggaggaggagaagattcccctggagcaagtcgccaacttcaacgaggtg
tgtgacgagatcaagaagaagctcatctctttgaaggaggtccccaacaggatcgagtgt
ccactcatctaccatctggacgtggcggccatgtaccccaacatcatcctcaccaaccgc
ctgcagccctctgctatggttgacgaggccacgtgtgctgcctgcgatttcaacaagccg
ggggccaactgtcagaggaagatgagctggcaatggaggggggagatcatgccggccagc
cgcagtgagttccaccgtatccagcagcagctggaatcagagaagtttcctccgctcttc
cctaacggcaggccgcgggccttccatgagctcaacctggaggagcaggcccgccacgag
aagaaacgcctgggcgactactgcaggagggcctataagaaggtccgccagaccaagctg
gaggagcgggtcaccaccatctgccagagggagaactccttctacgtggacactgtgcga
gccttcagagaccgccgctacgagtttaagggactgcacaaggtgtggaagaagaaactg
tctgcagcccaggaaagtggtgacgctgccctggtgaagcgctgtaagaacatggagatc
ctctacgattctctccagctagcccacaagtgcatcctcaactccttctatggctacgtc
atgaggaaaggggcccgctggtactccatggagatggctggcatagtgtgctacaccggt
gccaacatcatcacccaggccagagagctcgtggaacagatcgggaggcctctggagctg
gacacggatggtatctggtgcgtcctgcccaacaccttccccgagaactttgtggtgaag
acgagcaacgagaagaagcccaaggtgaccatctcctacccgggcgccatgctcaacatc
atggtgaaggaaggcttcaccaacgaccagtaccaggagctggtggaccctgcctcgctg
acctacgagacgcgggcggaaaacagcatcttcttcgaggtggacgggccctacctggcc
atgatcctgcccgcctccaaagaggagggaaagaaactgaagaaaaggtacgctgtgttc
aacgaggacggctcgctggccgagctgaagggcttcgaggtgaagaggcgaggcgagctg
cagctcatcaagatcttccagtcgtccgtgttcgaggccttcctcaaaggcaccactcta
gaggaggtgtatgactcggtggccaaggtggccgactactggcttgacgtgctctacagc
aaggctgccaacatgccggacgcggagctgtttgagctcatctcggagaaccgctccatg
tcgcggaagctggaggactatggcgagcagaagtccaacaccatcagcacggccaagcgg
ctggccgagttcctgggagaccagatggtgaaggacgccgggctgagctgccgctacatc
atctcccgcaagccagagggcacgccggtcacagagagggccatccccctggccatcttc
caagctgaacccagtgttaagaagcacttcctacgcaagtggctgaagatgcccagcctc
catgacctggacatccgctccatccttgactggagctactacattgagagattgggtagt
gccatccagaaaatcatcaccattccagctgccctgcaacaggtgaagaaccccgtgccc
agagtgcgccacccggactggctccacaagaagctgctggagaagaacgacatctacaag
cagaagaagatcagcgagctgttcaccagcgagggcaagagacaggtggcccatcatgcc
ctggaggcagggcaggcggctgacattgaggactttgggatgcctgcccgacccctgcag
ccggccatactgatcagcaccaagcgcaagcgggtgtcgcaaggagagaacagccaggcc
gtggagtcccaggagatggagctcacccagtcctggagggagatcctcggccctccacca
cccacgggggaaacgcaggaggcgcgcctggtgtggctgcgctaccacaagaaaaagtgg
gagctgcagctgcggcagaggaaggagcgccggaagcgccggcgcctgctggacggcgag
gtccaggccatggggggaggggtgatccgggacgcgggccccgccacaggcctgggtagc
ttcctccgccgcacggcgcgcagtatcctggacatgccctggcagatcgtacagattgca
gagaccagtcaccctgggctgtataagctgtgggctgtgatcggcagtgacctgcactgc
atgaagctcaacatcccacgggtgttctacgtcaaccagaaggtccccaagcaggaggag
ggagccacatacaagaaggtgaaccgtcttctgccgcgctccaacatcgtctactacctg
taccagtactctgtccctgaggacatgtaccaggagcacctcaacgagatcaacgctgac
ctctctgccccagacatagagggggtctacgagacacaggtccctctgctgttccgggcc
ctggtacagctgggttgtatgtgcatggtcaacaagcagttggtccgggacctgggcggc
cgggaggctgagacgtacgacctggagcacctggagatgagatccctggcccagttcagc
tacctggagcctgggagcgtccgacacatctacctttaccaccacagccagggccacaaa
gccctgttcggcctgttcatcccctcacagcgcaaggccagcatctttgtcctggacacg
gttcgcagtaaccagatgcccaacctgaacaccctgtatggggcagagcgtacagccctg
ctggagaagaccagcgaagagctcctgccccctgagaaacacacctttgaggtgcgggcc
gagaacgatgtgaaggccatccaccgagccctgcagcgcatactgctcagctacaagggg
gagcgccgcgggcccaccctgatcgcagtgcagtccaactgggagctgcggcggctggtg
gcgggcatgccggtgctggaggagttcccggtggtgccggtgcatgtggtggacgagatc
agctacaacgtgctggactggcagcgccacggtgcccgccgcatggtccgccactacctc
aacctggacagctgcctgtcgcaggcttttgacatggccagatactaccacttgccggtg
gggaacctgccccacgatgtgtccatctttggttctgacctgttcctggccaggcacctg
aggaagcacaaccacctgctgtggctgtcccccactgccaggcctgacctggggggcaag
gaggccgacgacagcaggctggtgatggaggctgatgacaggggctccatggagatcaac
gctcagggctgctactcaacagtgtgtgtggagctggacctgcagagtttggctgtcaac
accatcctgcagtcgcagcatgtcaacgacatggagggaggagccagcctgggtgtcagc
tttgatgtcatccagcaggcctcgctggaggaaatgatgtcagggaaccagggagccagt
gcggtggccagctacgacgagaccgccctctgctccaacaccttcaggatcctgaagagc
atggtggttggctgggtgcgggagatcacgcggtaccacaacgtctacgccgacaaccag
gtgatgcacttctaccgctggctgcgctcgcccagctcgctgctttacgacccggcgctg
caccgcaccctacacaacatgatgaagaaggtattcctccagctggtggcagagttcaag
cggctgggctccaccgtggtgtacggaaactttaaccgcatcctcctttgcactaagaag
cggaggattgacgacgccatcagctacgtggagtacatcaccaacagcattcactcgcgg
gaaatcttccactccctctccatctccttctcccgctgctgggagttccttatgtggatg
gatctggccaactatggaggagtgaagggcaaactgccctccagcgtcctgtatggagag
aatgggacagcccagaagaagggaaaggaggatggagaggaggagggcagcgaggacgag
gaggaagctgaggaggaggatggagccggagaggtggatgaggtggaggagctgattgaa
agcagctggaacatcatgcagtatctgcctcagaccgcctcctgtcagaaatacttcctc
atgatcatctccgcctatattgctgccatctaccacagcatgcgggaggagctaagacgc
aacgccccgggagccacgcccgttaagaggcggggcgggagccagacttcccagcaggca
gcaggagattccacagcacttcctggtatgatctccttctctcaagagtatgtgtccagc
gagctgacccagaacttcttcaccatcacccagaagatccagaagaaggtgacgggcacc
cggagcgtgacccagccctcggaaatgttccccgtcctgcctggctcccacctgcctctc
agcaacccagccctggaattcatcaaatacgtctgccaggtcctctccctggatgccaac
atagtgaaccaggtgaacaagctgaagagggacctgttgcgtctggtagacgtgggtgag
ttctcggaggaagcccagttccgcgacccctgcaactcttacatcctgcccgaggtcatc
tgccaccactgcaacttctgccgcgacctcgacctttgcaaggacccctcggtggcacag
gacggctctgttttgccccagtggttctgctccaactgccagacccagtatgagactgag
tccattgagatggccctggtggaggccttgcagaagaaactcatgagttacactctgcag
gacctggcttgtgccaagtgtaaaggagtgaaggaggccaacatgcctctttactgcact
tgtgcaggagactttgaactcaccttccccaccaagagtttctcagagcagatcaaagtg
ttccggaacatcgccgcacactacaacatgaacttcctggaagagaccattgactggcta
ctggtcatgagtccacaaataagccagtctcgatga
DBGET
integrated database retrieval system
