Salvelinus fontinalis (brook trout): 129826012
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Entry
129826012 CDS
T11136
Name
(RefSeq) ubiquitin-protein ligase E3B-like isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129826012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129826012
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129826012
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
HECT type E3
129826012
BRITE hierarchy
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GFIT
Other DBs
NCBI-GeneID:
129826012
NCBI-ProteinID:
XP_055742236
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Position
28:6540866..6562882
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AA seq
1065 aa
AA seq
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MFSAAQSSKSEFLDKARQAREERKGYKARDRAATLIQALVRRFLCRCRLQKQIRKEVDDL
FQDAGTTKRNALSIFKIARKLLFIFCQDDKLRFEKLCRSILGSMDVENEPKVWYVSLALS
KDLTIPWIKQIKDVLWISCQFLKKLKPDIMQDNKLVTLYLTMLVTFTDTSTWKIVRGKGE
ALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLTKGTLTAVFTLALRPVIAA
HFSDNLLRSLLLHIMSVPAVVSHIYTITPECMTTIQTHDLLRKFILFLSREEQCADICVC
LEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVTELTDMLSYCQRYVSQKKSNLTHWHPVL
GWFSQTVDYGLNESMPLVTKQLQYLWGMPVIWTLFSDVLSKKLETQDPTPPPQPTTSQNN
LPVKSLFKRAFQKSASVRNILKPVGGRRVDSAEVQKVCSICVLYQTALTTLTQIRLQILT
GLTYLDDLLPKLWAFICELGPQGGLKLFIECLNNDTEESKQLLAMLMLFCDCSRHLITIL
DDIEVYEEQISFKTEELVTISSFLNTFVYKMVWDGILENATGEKLDLFHSVHGWLMVLYE
RDCRRRFSPDDNWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNIVTK
EKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVDEA
GIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGKMLG
KAMYEGIVVDVPFASFFLSQVMGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVGDL
GLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFIRGF
RSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILSSD
FSSEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRK
KEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcagctcagagttccaagtctgagttcctggacaaagccaggcaggcgcgt
gaggagaggaaggggtacaaagcaagggacagagcagccaccctaattcaagcgctggtg
aggagattcctctgtcgctgcagactccagaaacaaataaggaaagaagttgatgactta
ttccaagatgccgggaccacaaaaagaaacgcactatccatttttaaaattgcacggaag
ttactattcattttttgccaagatgataagttgagatttgagaagctttgtcgctccatt
cttggcagcatggatgttgaaaatgagcccaaagtttggtatgtgtcattggccctttct
aaagacctcaccatcccttggatcaagcagattaaagatgtcctgtggatctcctgtcag
ttcctgaaaaaattaaagcctgacatcatgcaggacaataagctggtgactctgtacctc
accatgctggtgaccttcacagacacatcaacctggaagatagtgagagggaaaggcgag
gccctcagaccagctttgacccggatctgtgagaacatcatggggcatctcaatcaaaag
ggattttattcaatactgcagattctactcaccaacggattggcacgctccagaccctct
cttaccaagggcacactcacagcagtattcacgctggcattaagacctgtcattgctgct
cacttctctgacaacttgctgaggtctctccttctccacatcatgtctgtcccagcagtt
gtctcccacatctacaccatcaccccagagtgcatgaccaccatccagacccatgacctc
ttgaggaagttcatcctgttccttagccgcgaggagcagtgtgccgacatctgtgtctgc
ctggaggggagccacacactgtgcttactgggcaacctgattcacctgggctacctcaac
gagaaagtactggaggaggaggccaaccactttgtgacggaactgacggacatgctgtcc
tactgccagagatacgtgtcccagaagaaatctaacctcacccactggcaccctgtcctg
ggctggttctcccaaaccgtagactacggtctgaatgagtccatgccactggtcacgaag
cagctgcagtacctgtggggcatgcctgtgatctggacgctcttcagtgacgtccttagc
aaaaagctggagacccaagatcccacgcctccgccgcaacctaccacgtcccaaaacaac
ctgccagtcaagagtctattcaagcgggcatttcagaagtctgcctcagtgcgaaacatc
ctgaagccagttggcgggagacgggtggactccgcagaggttcagaaagtgtgcagtatc
tgtgtactgtaccagacagccctcaccacgctcacccagatacgattgcaaatcctcact
ggcctaacctacctggacgacctgctgcctaagctgtgggccttcatctgcgaactagga
ccccaaggagggctcaagctgttcatagagtgcctgaacaacgacacagaggagtctaag
cagctgctagccatgctcatgctgttctgcgactgctccagacacctcatcacgatcctg
gatgacattgaagtttacgaagagcagatctcgtttaagacggaagagctcgtaaccatc
tcctcgtttctcaacacgtttgtttacaagatggtctgggatggtatcttagagaatgcc
acgggagagaagctggacctgttccacagcgttcacggctggctgatggtgctttacgag
cgggactgcaggaggaggttctcccctgatgacaactggctgcgcaaggatctaaagccg
agccttttgttccaagagctggagaagggcaagaggagagctcagctgttacttcagtac
atcccacacgtcattccacacaaaaacagggtcctgctgttccgaaacattgtcaccaag
gagaaggaaaccttgggattggtggagaccagctccgcctctccgcatgtcacccatatc
accattcgccgctcacggatgttagaggatggttatgaccagctccgccggttgcccgtc
aactccatcaaaggtgtgatccgcgtgaagtttgtcaacgacctgggtgtggacgaggcc
ggcatcgaccaggacggcgtcttcaaggagttcctggaagagatcatcaagaaagtcttc
aatccggctctcaacctctttaagaccaccagtggcaacgagaggctctacccctcccct
acgtcctacatccacgagaaccacctgcagctctttgagtttgtggggaagatgctcggc
aaagccatgtacgagggtatcgtggtagacgtacccttcgcctccttcttcctcagccag
gtcatgggccaccatcacagcactttctacagctccattgacgagctgccctccctggac
tctgagttctacaagaacctcacctccattaagcgctacgacggggatgttggtgatcta
ggactgacgctatcgtatgacgaggatgttatgggacagctggtctgtcatgagctgatc
cctggaggaaagacgatgccagtcaccaatgaaaacaagatcagctatatccacctgatg
gcgcacttccgcatgcacacgcagataaaagagcaaacggcagctttcatccgagggttc
cgcagcatcatcaacccggagtggctgcacatgttctccacccccgaggtccagcgcctc
gtctccggggacaacgccgagatagacctggacgacctcaagaaacacacagtgtactat
ggaggtttccacagcagccatcgggtcatcatctggctgtgggacatcctgtccagtgac
ttctcatctgaggaaagggccatgttcctcaagtttgtcaccagctgttcgagaccaccc
ctcctgggttttgcctacctcaagccccctttctccattcgctgtgtggaggtgtctgat
gatcaggacacgggggacaccctgggcagtgtcctgcggggtttcttcaccatccggaag
aaggagcctggcggccgcctccccacctcatccacctgcttcaacctgctcaagctgcct
aactacagcaaaaagagcatcctgcgtgacaagcttcgctatgccatcagtatgaacaca
ggttttgagctctcctaa
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