Salvelinus fontinalis (brook trout): 129826048
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Entry
129826048 CDS
T11136
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129826048 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129826048 (rorb)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129826048 (rorb)
Nuclear receptors [BR:
sfon03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129826048 (rorb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129826048
NCBI-ProteinID:
XP_055742307
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All DBs
Position
28:complement(7927413..7959031)
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AA seq
471 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQQQTGEAEALAR
VYSSSLTNGLNTLNHEIGGTYANGHVIELPKGQVNGGAPGGYYHSMDSTQPSPDQSGLDM
AGMKHIKQEPVYDLTPVTNLFNYSSYQDSQLAPSNVSMGELDRIAQNIIKSHLETCQYTA
DELQQLAWQTHSYDDIKMYQSKTRDMLWQQCAIQITHAIQYVVEFAKRISGFMELCQNDQ
ILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLCS
LQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDTLAKLIG
RIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITIPK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagttataccatgcaaaatttgcggagacaagtcatcaggaatc
cactatggagtcatcacgtgtgagggctgcaaagggttcttcagacgtagtcagcagaac
aacgctgcatactcctgccctcgccagaggaactgtctgatcgacaggaccaaccgaaac
cgctgccaacactgccgcttacagaagtgtctcgcactcggaatgtccagagatgcggtg
aagtttggccgcatgtcaaagaagcagcgagacagcctgtacgctgaggtgcagaagcac
cagcagcggatcctgaatgagcggcagcagcagactggtgaggccgaggccctggcgcgc
gtctactcctccagcctgaccaacggcctcaacaccctcaaccacgagatcggaggcacc
tacgccaacggccacgtcatcgagctccccaagggccaggtgaacggtggtgcccccggc
ggctactaccacagtatggactccacccagccctccccggatcagtcaggcctggacatg
gcgggcatgaagcacataaaacaggagcctgtgtatgacctgacccctgtgaccaacctg
ttcaactacagctcctaccaggacagtcagctggcgccaagcaatgtcagcatgggagag
ctagatcgtatcgcccagaacattataaagtctcacctggagacctgtcagtacacagca
gatgagctccagcagctggcctggcagacacactcctacgatgacatcaagatgtaccag
agcaaaacgcgagacatgctgtggcagcagtgtgccatccagatcacccatgccatccag
tatgtggtggagtttgccaagcgcatctcaggcttcatggagctgtgccagaatgaccag
atccttctgctcaagtcaggttgtctggaggtggtcctggttagaatgtgtcgggcgttt
aacccgctcaacaacacagtgctgtttgaggggaagtacgggggcatgcagatgttcaaa
gcactaggctgtgacgacctggtcagcgcggtgtttgactttgccaagagtctgtgctct
ctgcagctcactgaggaggagatcgctctgttctccgcagcagtgctcatctccacagac
cggccgtggctgatggagcccaggaaggtgcagaagctccaggagaagatctactttgcg
ctgcagcacatcatgcagaagaaccacatggatgaggacacgctggctaagctgattggt
cggatccccacgctgtcggccctgtgtactctccacaccgaggagctacaggccttccag
cagcttcatcccgagacggtcaatgtgctcttccccccactctacaaggagctcttcaat
cccgaccccaatgcagccatcaccatacccaagtga
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integrated database retrieval system
