Salvelinus fontinalis (brook trout): 129826113
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Entry
129826113 CDS
T11136
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129826113
04020 Calcium signaling pathway
129826113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129826113
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129826113
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
129826113
NCBI-ProteinID:
XP_055742422
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All DBs
Position
28:complement(10444518..10593653)
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AA seq
2427 aa
AA seq
DB search
MARFEEELSNRRGGVCQAGPPRGAGRPAGPPSGPRVYKQSMAQRARTMAIYNPIPVKQSC
LTVNRSIFIFSEDCIIRKYAKKITEWPPFEYLILATIIANCIVLALEQHLPAGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGMLATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLDFYMGK
FHRTCFRTDTGEQAAEFPCGMEAPARTCENGTVCQEYWIGPNYGITNFDNILFAILTVFQ
CITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKHAEEKSPLDGAWYKRKHNNPVLKR
AKKSKNDLINAEEGEDHFTDISSVVPPGSPFARASLKSSKNGSASYFRRKEKRLRFTIRH
LVKAQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLALFLTEMSMKMYGLG
PMSYFHSSFNCFDFGVIIGSIFEVIWAVVKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGLFNFDEETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEVAITKKMALQKAKEVKEVSPMSAANISITALHSILYTGQHGAERAMPASFV
KQSQGALSSSSSVCSVNSLSYVCSPVHHYLSKEQQKSLKMMSVWEQRTTQLRRHNLRASS
EALYSELDPEERLRMSSALHIRPDMKTHLDRPLVVEPHDGPGPMGQNKPRTPEETDTPED
PAGPQPRRHHRHRDRERPIDEANENGDPGKEGRHHVHHSRSKDPDGTRGKEGKSERSRSR
EGGRRHHHQTLVDEGGGGGTGEREHRHHHSHRQAREGNGTVNSGGKGERRSRHKDGRSGE
RCSRGENGANGERKRHKTHGSRGQSTLEGEDHSEREKGRGHRDRYVESEGDSLAISPQQD
PGDQRWGTEGPEDSDNQRNVRRTGQTAVNIPPVTITPPPGETTLIPMNSIDCETMPMNEE
KKTLEERTQSGPRPILPYSSMFVFGQANVVRRLCHYIVSLRYFEMCILVVISMSSIALAA
EDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSG
ALVAFAFSGSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVY
MLFMFIFAVIAVQLFKGKFFYCTDESKSLEKDCRGNFLDYDKDEVAAQPRVWKKYEFHYD
NVLWAFLTLFTVSTGEGWPDVLKHSVDATFEDQGPSPGYRIEISIFYVVYFVVFPFFFVN
IFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAKQMTRYMPENVQSFQYRMWKFVV
SPPFEYSIMIMIALNTVVLMMKFHGAPDFYEAMLKHFNIVFTALFSLECILKIIAFGPLN
YLKDPWNVFDFVTVLGSITDIVVTEINDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWT
FVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEDTAITHHNNFRTFLQALMLLFRS
ATGEAWHEIMLSCLSHRACDERSGNLGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMD
NFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIRYNDMYNLLRIISPPLGLGKNCPNR
VAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLSSGMVAQRLSDAELKKELSTVWP
SLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRPKEQQQQQQNAAGSQGKVG
ALFKPILPLTYKQEKEKSINNMEPPCELLPQPQPQPQALPRPSSTLLNNIEPPCELLPQP
QPQALPRPSSTLLNNGSTLPGQDGTMKGSSSWVSEKSREVHRPKNKRPVQMGQSEDVPNT
TLPQESVEMRKMDTSDNTVPGPGSGLESQGRAVSMPRLNAELQRSHSRHSPGTLLAPVPD
CSPMKRSASTHAPQRPQEANLRDYTLETPSIQERPHHHHHHRCHHRRERDKKQRSLDRTP
STAGTPGDPAAEPSSRDRVQDRGRSHERKHHSTAGEKQRYYSCDRYGSREHCHTTKSATA
SCATSPSEVQDPSINKQGSGSVKCSPVMMASGASTPSRGRRQLPQTPLTPRPGVAYKTAN
SSPVHFVSAQCGSGLPTQSPGRLSRGLSEHNALLHSGSSHIPSPVTRISSEPFLGYSHRE
AQGQGSLYCSLRDELLSPYAARVRSPRTALPQMGPGPLHLPPPPQQSHAVPNGYHFTFGG
IGNASPGSGSGARAPRYYHEADEDEWC
NT seq
7284 nt
NT seq
+upstream
nt +downstream
nt
atggctcgattcgaagaggaactatccaaccggcgtggaggggtctgtcaagcgggccca
ccaaggggggcaggtcggccagcaggccccccaagcggccctagggtgtacaaacaatca
atggcccaaagagccaggacaatggccatttacaaccccatccctgtcaagcagagctgt
cttactgtcaaccggtccatcttcatctttagtgaggattgtatcatacggaaatatgcc
aaaaagattacagaatggcctccatttgaatacctgatcctggccaccattatagccaac
tgcatcgtccttgcattggagcagcacctaccagccggcgacaagacccccatgtcagag
cgcttggacgacacagagccctattttattggaatattttgttttgaagctggcattaag
atcatcgcccttggctttgcgtttcacaaaggctcctatctccggaatggctggaatgta
atggactttgtggtggtgctaacagggatgctggctacagtgggagcagactttgacttg
agaactctgcgggcggtacgggtcctgaggcccctgaaactggtgtctggaatccctagt
cttcaggtggttctgaagtccatcatgaaagccatggtgcctctgctgcagatcggtatg
ctgctcttcttcgctatcctcatgttcgccatcatcggcctggacttttacatgggcaag
ttccacaggacctgtttcaggactgatacaggtgagcaggcagcagagttcccctgtggt
atggaggctccagcgaggacctgtgagaatggcactgtgtgtcaggaatactggatcggc
cccaactacggcatcaccaacttcgacaacatcctctttgctattctcaccgtcttccag
tgcatcaccatggagggatgggtggacatcctctataacgccaacgatgcctcaggcaac
acctggaactggctctacttcatccccctcatcatcatcggatccttcttcatgctcaac
ctggtgctgggagtcctgtctggggagtttgccaaggagcgtgagcgtgtggagaagagg
caggagtttctgaagcttcgcaggcagcagcagatcgagagggagctgactggatacctg
gagtggatatgcaaggcagaggaagtgatgctggcggaggaggacaagcacgctgaagag
aagtcccctctggatggagcgtggtacaaaaggaaacacaacaacccagtgttgaaaaga
gcaaagaagagcaagaatgacctgatcaatgctgaggagggcgaggaccacttcactgac
atctcatctgttgttcctccagggtctccgttcgcccgggccagcctgaagagcagcaag
aacggcagtgcctcctacttccggaggaaagagaagcggctccgcttcaccatcagacac
ctggtcaaggctcagagcttctactggacagtgctgtgtctggtgggcctcaacacgctg
tgtgtggccatcgtccattacgaccagcctgagtggctcacatatgcactgtatttggca
gagtttgtattcctggccttgtttctgactgagatgtccatgaaaatgtatggactagga
cccatgagctacttccattcgtctttcaactgttttgatttcggagtgattataggcagt
atttttgaggtgatctgggcagttgtgaaacctggggcctccttcggcatcagcgtcctg
agagctctccgtctgctcaggattttcaaagtcactaagtattggaactctctgaggaac
ctggtggtctctctactcaactccatgaagtccatcatcagcctgctgttcctcctcttc
ctctttatcgtggtgttcgccctactgggcatgcagctctttgggggactgtttaatttt
gacgaggagacgccaacaacaaactttgacacctttccagcagccattctcacagttttc
cagattctgacaggagaggactggaatgcggtgatgtatcatgggatagagtcccagggg
ggcgtgcgccggggaatgttctcctccatctacttcatcgttctcaccctgtttggaaac
tacactctcctcaatgtcttcttggccatcgctgttgacaaccttgcaaacgcacaggag
ctcactaaggatgaggaagagcaggaggtggccatcaccaagaagatggccctccagaag
gccaaggaggtcaaggaggtcagccccatgtcggccgcaaacatctccatcacagcgcta
cacagcatcctgtacacaggccaacatggagcggagagggcaatgccagcaagttttgta
aagcaaagtcaaggtgcactctctagcagctcgtccgtctgcagcgttaattcactgagt
tatgtctgctccccagtccatcactacttgagtaaggaacagcagaagtctctgaagatg
atgtcagtgtgggagcagcgcaccactcagctgaggagacataacctgcgggccagcagt
gaggccctgtacagcgagctggaccctgaggagaggctacgcatgtcctccgccctgcac
atccgccctgacatgaagacccacctggaccggcccctggtggtggaaccccatgacggc
cccggtcctatgggccaaaacaagccccggacccctgaggagacggatacccctgaggac
ccggccggcccccagccacgcaggcaccaccgccaccgggacagggagagacccatcgac
gaggccaatgagaatggcgatccaggcaaagagggtaggcaccatgtccaccacagtcgt
agcaaggacccagacggcacccggggcaaggaggggaagagtgagcggtcacgcagccga
gaggggggcaggaggcaccaccaccagaccttagtggatgagggaggaggaggcgggacg
ggggagagagagcaccgccaccaccactcccacagacaggccagagagggcaacggcact
gtcaacagcggaggcaagggcgagcgcaggtcacgccacaaagatggccgctcgggagag
aggtgctccaggggagagaacggagccaatggggagaggaagagacacaagacccacggc
tcaaggggccagtccacactggagggagaggaccacagtgagagagagaaggggaggggc
cacagggacagatatgtggagtctgagggtgactccctggccatcagcccccagcaggac
cctggagatcagaggtggggcaccgagggacctgaagactcagacaaccagaggaacgtc
agacggactggacagacggccgtcaacatcccccctgtcaccatcacccccccacccggg
gagactacccttatacccatgaacagtatagactgtgagaccatgcctatgaacgaggag
aagaagaccctggaggagcggactcagagtggacccagacccatcctgccttacagctcc
atgtttgtgtttggccaggccaacgtggtgcggcgtctgtgtcattatattgtcagcctg
cggtactttgagatgtgtatcctggtagtgatatccatgagtagcattgcattggctgca
gaggaccctgtccaggccaacgctccgcgcaacaatgtgctcaagtatctggactacgtc
ttcacgggagttttcacttttgagatggtgattaagatggttgacctgggcctcctgctc
catcctggttcttacttcagagatctctggaacattctggacttcattgtggtcagtggc
gcactggtggcatttgcattttcagggtccaaaggaaaggacatcagcaccatcaagtcc
ctcagagttctgcgagtattacggcccctcaagaccatcaaacgcctacccaagctgaag
gctgtgtttgactgtgtggtcaactccctgaagaacgtgttcaacatcctcatagtctac
atgctcttcatgttcatcttcgctgtcatcgccgtgcagctgttcaagggcaagttcttc
tactgcaccgatgagtccaagagcctggagaaagactgcagaggtaatttcctggactat
gataaagatgaggtggccgcccagcctcgggtgtggaagaagtatgagttccactatgac
aacgtgctttgggccttcctcactctcttcactgtgtccaccggagagggctggcctgat
gttcttaagcactctgtggatgctacctttgaggaccagggtcccagtccaggctaccgt
attgagatctccatcttctacgtggtctacttcgtggtcttccccttcttcttcgtcaac
atctttgtggccttgatcatcattaccttccaggagcagggagacaaggccatgtcagag
tgcagcctggagaaaaacgagagagcctgcattgactttgccatcaacgccaagcaaatg
acgcgttacatgccagagaacgtgcagtccttccagtaccggatgtggaagtttgtggtg
tcacctccgtttgagtactccattatgatcatgattgccctgaacaccgttgtgctcatg
atgaagttccatggagctccagacttctacgaggccatgttgaaacacttcaacatcgtc
ttcactgccctcttctctctggaatgcattctgaagatcattgccttcggcccgctgaat
tacctgaaggatccctggaacgtgtttgactttgtgacagtgctgggaagtataactgac
attgtggtcacagaaatcaatgaccggctgttgaatctgagttttctgaggctgttcaga
gcagctcgtctcatcaagctgctgaggcagggatacaccatccgtatcctgctgtggacc
ttcgtccagtccttcaaggccctgccctatgtttgccttctgatagcgatgctgttcttc
atctatgccatcattggtatgcaggtgtttggaaacattgagctcaacgaggacacagcc
atcactcaccacaacaacttccgcacttttcttcaggccctcatgctgctgttcaggagt
gccacaggggaggcgtggcatgagatcatgctgtcgtgtttgagtcacagagcctgtgat
gagaggtcaggcaacctggggaaggagtgtggcagtgacttcgcctacttctactttgtg
tccttcatcttcctctgctctttcctgatgctcaatctgtttgtggctgtcatcatggat
aactttgagtacctgactcgagactcatctatactgggccctcatcatctggatgagttc
atccgtgtttgggctgagtacgaccctgctgcctgcggacggattcgctataacgatatg
tacaacttgttacgaattatctcaccccctcttggcttagggaagaactgccctaatagg
gtagcgtacaagcggctagtcaagatgaacatgcccatcgccgatgacaacacagtccac
tttacctccactctcatggccctgatccgcacggccctggagatcaaactgtcctcaggg
atggttgcccagcgtctttctgatgctgaactgaagaaagagctctctacagtttggcca
agcctttcacagaagactatggatctgttggttacaccacacaaacccaatgagcttact
gttggaaaggtgtatgcagccctgatgatctttgactactacaagcagaaccgagccaag
aggcccaaggagcagcaacaacagcaacagaatgctgccggctcccagggtaaggtgggg
gctctgtttaaaccaatactgcccctgacttacaagcaggagaaagagaagtccatcaac
aacatggagcctccctgtgaactacttcctcagccccagccccagcctcaggccctacct
agacccagctccaccctgctcaacaacatagagcctccctgtgaactacttcctcagccc
cagcctcaggccctacctagacccagctccaccctgctcaacaacggaagcacactgcca
ggccaagatggcaccatgaaaggatcatcctcctgggtgtcagagaagtctagagaggtc
cacagacccaagaataagagacctgtccaaatgggccagtctgaagatgtcccaaacaca
acacttccccaggagtcagtggagatgaggaagatggacaccagtgacaacacagtgcct
ggtcctgggtctggactggagagccaggggagggctgtgtccatgccccgcctcaacgca
gagctgcagaggagccattcacgccactccccggggaccctgctggcccctgttcctgac
tgcagcccgatgaagcgctctgcgtccacccatgccccacagcgcccccaagaggcgaac
ctgcgtgactacaccctggagacgcccagcatccaggaaaggcctcaccaccaccaccac
caccgctgccaccaccgcagagagagggacaagaagcagcggtcactcgacaggacgcca
agcaccgctggcacaccaggagacccggctgcagagccctcgtctagagacagggtgcag
gaccgcggccgctcccatgagaggaagcaccactcgacggcgggggagaagcagcggtac
tactcctgcgatcgctacggcagcagggaacactgccacaccaccaagtctgccaccgcc
agctgtgcaacctcccccagcgaggtgcaggaccccagcatcaacaagcagggtagtggt
tcggttaaatgcagcccagtgatgatggcctcaggggctagcacacccagccgtggacgc
aggcagctaccccagacccccctgaccccccgccccggggtggcctacaagactgccaac
tcctcccctgtgcactttgtgtctgcccagtgtggcagcggcctgcccacccagagtcct
ggccggctgagccgcgggctgtctgagcacaacgccctgctgcacagtggctcctcccac
atcccctcccctgtcacccgcatcagctccgagcccttcctgggctacagtcacagggaa
gcccagggccagggcagtctgtactgcagcctccgggacgagctgctgagcccctatgct
gccagagtacgctcccctcggaccgcactgcctcagatggggccggggcccctccacctg
cctccgccaccccagcagagccatgcggtgcccaacggataccacttcacctttggtggt
attggcaacgccagcccggggtctggctctggtgccagggcacccaggtactaccacgag
gcagatgaagatgaatggtgctag
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