KEGG   Salvelinus fontinalis (brook trout): 129826119
Entry
129826119         CDS       T11136                                 
Name
(RefSeq) negative elongation factor B-like
  KO
K15180  negative elongation factor B
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129826119
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfon03021]
    129826119
Transcription machinery [BR:sfon03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     129826119
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 129826119
NCBI-ProteinID: XP_055742448
LinkDB
Position
28:complement(10635371..10650731)
AA seq 583 aa
MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQTENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELRDKLMERVATIAEGKDEERYGKLEELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKLVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSSDL
SILHNFFSPSPKARRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDPCHKFTWCLDACIREKFVDAKRARELQGFLDGVKKGQEQVLGDL
SMILCDPFACNTLVLSTVRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWDMIDSQVFK
EPRLELEVVTRFLPAMLSVVVDDYTFTVEQKLPSEEKTSLAYPTALPDAFNKYLQENRVA
CEIGLYYTLHIAKQRNKNALQRLLPALVETHNEMAFGDIFLHLLTGHLTLLSDEFGTEEF
CSAVFDAFLLASFSSKENVHRHTLRLLLHLHHKVLPSCVETLLKTLEPPKQSSDQVKELY
TQLTEKLEAQKKSPAQPDEAPSLDLGLHPVTVPTTASTPTTPL
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgtttgcgggcctacctgagcttgggatatccaatggcgaggatctaaaagaaacactg
actaactgcacagagcctctgaaagccattgaccagtttcagacagaaaatggcattttg
ttgccaactcttcagtcagctcttcccttcctggaccttcacgggactcctcggttggag
tttcaccagtctgtctttgatgagcttcgtgacaagttgatggagcgagtcgccactatc
gcggagggcaaggatgaggaacgttatgggaaacttgaagagcttctagagaagagtttt
ccgctggtgaagatgccttccattcagccagtggtcatgcaggttctgaaacatcttcca
aaggttccagagaaaaagctgaagcttgtaatggctgataaggaactgtataaggtctgt
gctgttgaggtgaagaggcagatctggcaggacaaccaggctctcttcggggatgaggtt
tcgcccctgctcaagcagtatattgtggagaaggaggcagcacttttcagcagtgatctc
tctattttgcacaacttcttcagcccctcccccaaagcaagacgccaaggagaggtagtc
ttgaagttgacccagatgattgggaagaatgtgaaattgtatgacatggtacttcagttc
ctgcgaaccctcttcctgcgtacgcgtaacgtccactactgcaccttgcgtgcagagctg
ctcatgtccctccatgacctggacatcagtgagatctgttcagtagatccctgccataag
ttcacctggtgcttggatgcctgtatccgtgagaagtttgtggatgccaagcgagcccgg
gaattgcaaggttttctggatggagtgaagaaaggacaggagcaagtacttggggacctg
tccatgatcctgtgtgacccatttgcctgtaacaccctggttttgagtacggtccgaaac
ttgcaagaattgctcagccaggacgctctacccagagacagtccagacctgatgctgctg
ctcagaatgctgtctcttggtcaaggggcttgggatatgattgacagccaagtctttaaa
gagcccagattggaactggaggttgtaacccgttttctaccagccatgttgtcagtagtt
gtggacgactacaccttcactgtagaacagaagctccccagtgaggagaagacctccctc
gcttaccccacagccctgcctgatgccttcaacaagtacctgcaggagaacagggtggca
tgtgagataggtctgtattacacactccacattgccaagcagaggaacaagaatgcctta
caacggttacttcccgctttggtggagacccacaatgaaatggcctttggagacatcttc
ctgcacctcctgacagggcacctcaccttgctctctgatgagtttgggactgaagagttc
tgctctgccgtgtttgatgcttttctcctcgcctctttctccagtaaagagaatgtccac
agacacaccctacgcctgttgcttcaccttcaccacaaagttttgccatcttgtgtggag
accttactgaaaaccctggaacccccaaaacagagcagtgaccaggtgaaggagttgtac
acccagctgacggagaaactggaggcccaaaagaagagtcctgcccagccagacgaagcc
ccctctctagacctggggctccatcctgttacagtgcccactacagcctccactccaacc
acaccactttga

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