Salvelinus fontinalis (brook trout): 129826230
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Entry
129826230 CDS
T11136
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfon01002
]
129826230 (adamts13)
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
129826230 (adamts13)
Peptidases and inhibitors [BR:
sfon01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
129826230 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Reprolysin_5
Adt-1
Reprolysin_4
TSP1_CCN
TSP1_spondin
Reprolysin_2
Peptidase_M10
DUF6055
Motif
Other DBs
NCBI-GeneID:
129826230
NCBI-ProteinID:
XP_055742706
LinkDB
All DBs
Position
28:complement(14393865..14407981)
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AA seq
1549 aa
AA seq
DB search
MAALALLCLLSVLPGSTAILMRSPLEELFLHSLDQKDMVFYFGTDSATSVPEFQLIWTDC
ASTELHTGPWRCSFETEGKRFVLGIGERKQSFSCQSTLETARNTTLNIIRKSHAMCCQQA
KVLHPPSTKGFLTICARKMQGLVVAGKEKERLYIQPVLQKHIHLTEARNCSSPRIPHLVF
HQPFTARGPPRHSHMKRLRRQRSAIMPEVTHLELLVVVAPDVQLVHRQDTERYILTNLNI
ASELLRDMTLGANMRVHLVRMIILSEPEPEINISTNISSSLRSVCEWARRVIPSNDTDPL
HADLVLYITRFDLELPNGNKQVRGVAQLGGACSSQWSCVITEDTGFDLGITIAHEIGHSF
GINHDGIGNTCSSSGFMMASDGGYNSVDLTWSQCSRQQLYTFFSEGKADCVKDLPVLVGS
LQDWKPGLYYGVDDQCRIAFGSTARACSFTNPDLPACRVLSCHIKPDDNSSCKRLLVPLL
DGTECAPNQWCLKGRCVSPDQLSSSSSVVVHGSWSSWSQFSPCSRICGGGVTSRTRQCNN
PRPAFGGNDCKGRDTEAELCHQQQCERTQLAFMAEQCAQTDLQPLYLSPNTASLYTWIPA
VGFVTGDEQCRYMCQCKGENFIVSRGSQFVDGTRCEPDSPAPLGATTACLGGMCQLFGCD
GVLKSGKVEDVCGVCGGDGSSCSLTSQSYSGGQAREYVTFLTLPVNATQVHIVNRAPVFT
HLAVLIGNQYVVSGSGGIALNITHPSPLEDGRLVYRLYLTPDLLPLMEELLLPGTVTEET
HIQVYRKYGKEYGEQTSPNITYHFYTPISNNAFIKEIPRGKWTVVTTSCSVTCGSGIQKS
MYVCMDEDTKEHLEEVYCDSAPLLLLQQTTCHLPACPPSWEMGEFGPCSALCGGGEKVRP
VRCVQRQGADVLQVAVSECPQHSATQSVDTCNFQPCPARWNASEAGECSAVCGPGAAKRV
VTCVRSEGGHDVEVDHSLCSGLFKPPVLVSCVIDVCPIGWESKGQDQPILNKSPGLRYRS
RYLTVYVWSPVIGQCSKTCGNGTLQVWFSCLDHQTRLAVPEVYCDASSKPEPHTESCNPS
PCPPMWRYKQGVCSVSCGGGVAHRVLYCSQETEGDEEVVVNNTECSNMTKPIAVVTCNSN
SCPARWRVLRTGACSTSCDLGLARRHVSCVEYIHGDDSEVSEERCHAAVKPATTVPCLVQ
VCTFRWDVKDWNQCSVPCGYGIQSRAVSCMGPTKPEPLSPLLCMHMPKPITIRGCQMDDC
RVLEKTSPLTHTHTTNAPSLETRDQLPSPQGMEVSSSSMGVSPTLSLTQTPPTVTELITP
AMPTVTPKTSLCGQLLLGESGTVDLRHETGRCILSIGRPLDEVIHMKVESSSLSCKKREY
VAFYDRLVLVRKCDQLEDTELTSRTNVLLVRQHLLSSGNGVLLTYSSQKNNKKSHHQDCD
VQLFAPSGVIENPTMTSALGSHTCRVLINAPPSVKIRIRALSMGPVVNSTAAQSTFIMIR
DVDVLKTNVFKGQQLFDWRSAGNMAEIEFHGEYLQSNGSFRAEYSFVEP
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttggcgctgctctgtctgctgtcagtgctgccaggctccacagcaatacta
atgagatctccattggaggagctatttctgcactccctggatcaaaaggacatggtgttt
tattttggtaccgactctgctacctcagtgccggagtttcagctcatctggacagactgt
gcctctacggagctccacactggcccctggcgatgctccttcgagaccgaagggaagcgc
tttgtgctggggatcggggagaggaagcagtccttctcctgtcagtccacattagagaca
gctcggaacaccactctcaacatcataaggaaaagtcatgccatgtgttgtcagcaggcc
aaagttctacatcctccttcaactaaaggatttctcaccatctgtgccaggaaaatgcaa
ggcctggttgttgcaggtaaagagaaggagagactatacattcagccagtgcttcaaaaa
cacattcatctgactgaagccagaaactgttccagtccaagaatacctcatctggtgttc
caccagccatttactgccagaggcccccccagacactctcacatgaagaggctgcgtcgc
caaaggtcagccataatgcctgaggtgacccacctggagctgctagtggtggtagcgcct
gacgtgcagctggtccacaggcaggacacagagagatacatacttaccaacctcaacatt
gcctcagagctgttgagggacatgacactgggagccaacatgagagtgcatctggtccgt
atgatcatcctctcagaaccagagccagagattaacatctccaccaacatctcctcgtct
ctgaggagtgtgtgtgagtgggccagaagggtcatcccctctaatgacacggaccccctg
catgctgaccttgtgttatacatcacaagatttgatctggagctgcccaatgggaacaag
caggtgaggggcgtggcccagctaggcggggcatgttctagccaatggagttgtgtaatc
acagaggacacaggctttgatctgggcatcaccatcgctcatgagataggccacagcttt
ggtataaaccatgatgggattggtaatacatgcagcagcagtggctttatgatggcctct
gatggaggctacaacagtgtggatctcacctggtcccagtgcagcagacaacagctgtac
acattcttcagtgaaggcaaggctgactgtgtgaaagacttgcctgttctggttggctct
ctgcaagactggaagccaggcctttactatggcgtggacgaccagtgccggatagcgttt
ggtagcaccgccagggcctgctccttcaccaaccctgacctgcctgcgtgccgtgttctc
tcctgccacatcaaacctgatgacaacagctcatgtaaacgtctgctggtgcctctgttg
gatgggacagagtgtgcacccaaccagtggtgcctgaagggccgctgtgtgtccccagac
cagctcagctcctcttcctctgtggtggtgcacgggtcctggtccagctggtcccagttc
tccccatgctcacggatatgtggcgggggcgtcacttcccggaccaggcaatgcaacaac
ccacggcctgcatttggtgggaatgattgcaagggcagggatacagaggcggaactttgt
caccagcagcagtgtgaaaggacccagctggccttcatggcagagcagtgcgcccagaca
gatctacagcccctgtacctgtcccccaacacggcctccctctacacctggatccccgct
gtaggctttgtcacaggggatgaacagtgcaggtacatgtgccagtgtaagggagagaac
ttcattgtgagccgtgggtctcagtttgtggatgggactcgttgtgaaccagacagtcca
gctccccttggtgccacgacagcttgtctaggagggatgtgccagctgtttggctgtgat
ggagtgttgaagtctgggaaggtggaggatgtgtgtggggtatgtggaggggatggctcc
tcttgcagtctcacctctcagtcttacagtggtggtcaggccagagagtacgtcacattc
ctgaccctgccagtaaacgccactcaggttcatattgtcaacagggcacctgtcttcact
cacctggcggtgttgattgggaatcagtatgttgtgtctgggagtggcggcattgcgtta
aacatcactcacccctctcctctggaggacggtcgtctggtttatcgtctgtacctgacc
cctgacctcctgcctctcatggaggagctgctgctacctggaactgttacagaggagaca
cacatacaggtctatcggaaatatggaaaagaatatggagaacaaaccagtccaaacatc
acctaccacttttatactcccattagtaataatgcttttataaaagagatacccaggggc
aagtggactgttgttacaacatcctgctctgtcacctgtggctctggcatacagaaatct
atgtatgtctgtatggatgaagacaccaaggagcatctggaggaggtctactgtgattca
gctccccttctcctgcttcagcagacaacctgtcacctcccagcctgtccccccagctgg
gagatgggagagtttgggccctgcagtgccttgtgtggtggtggagagaaagtgcgccct
gtgagatgtgttcaaaggcaaggagcagatgtcctacaggtggccgtttctgaatgtcca
caacactcagccacacaatcagtggatacatgcaactttcaaccctgccctgcaaggtgg
aatgcgtcagaagccggggagtgttcagcggtgtgtgggcccggagcggccaaacgcgtt
gtgacatgtgtgcggtccgaagggggtcatgatgttgaggtggaccatagcttgtgttca
gggctcttcaaaccacctgtcttagtgtcttgtgtgatcgatgtctgccctattggctgg
gagtctaagggacaggatcaacctatacttaacaaatcccctggtttaaggtaccgctcc
aggtacctaacagtgtatgtttggagccctgtgataggccaatgctcaaagacctgcgga
aatggtaccctgcaggtgtggttttcatgtctggaccaccagaccaggctagcggtgcct
gaggtctactgtgatgcctccagcaaaccagagcctcacacagagtcctgcaacccttcc
ccttgccctcccatgtggcgctacaagcagggagtgtgcagtgtgtcgtgtggaggaggc
gtggcccatagggtgctatactgctcccaggagaccgagggagatgaggaggtggttgtg
aacaatacagagtgcagtaacatgaccaaacccatagcagtggtcacatgcaactccaac
agctgtccagccaggtggagagtgctgaggacgggggcctgttctacgtcttgtgatctg
gggttagccaggaggcatgtctcctgtgttgagtatatccatggggatgacagtgaggtg
tctgaggagagatgccatgcagccgttaaacctgctaccacggtaccctgtctggtgcag
gtgtgcaccttcagatgggacgtgaaagactggaatcagtgttcagtgccgtgtgggtat
gggatccagtctagagcagtgtcctgcatgggacccactaagcctgagcccctcagccca
ctgctctgcatgcacatgcccaagcccatcaccatccggggctgccagatggacgactgc
agggtcttagagaagactagtcccctcacccacacacacaccaccaacgccccctcacta
gagaccagggaccagttacccagcccccagggcatggaagtcagctcctcatccatggga
gtgtctcctactctcagcctgacccagacacccccgactgtaacagaactgatcacccca
gccatgcccactgtgacacctaaaaccagtctgtgtgggcagcttctgctgggggagtca
ggcacagtggacttgagacatgagacaggtcgctgcatcctgtcaataggccggcccctg
gatgaggtcatccacatgaaagtagagtccagctccctaagctgcaagaaaagggagtat
gtggcgttctatgacaggctggtactggtcaggaagtgtgaccagcttgaggacactgaa
ctgacctccaggaccaacgtcctgctggtgcgccagcatctcttgtccagtggaaacgga
gtgctgctcacttacagcagtcagaagaacaacaagaagagtcaccaccaggactgtgat
gtccagctgtttgctcccagcggggtcattgagaatccaacgatgacctctgcgttgggc
agtcacacctgtcgagtcctcatcaacgcccctccctcagtgaagattaggatccgggct
ctgagcatgggccctgtggtcaacagcacagcagcccagtccaccttcattatgatacga
gatgtagacgtcttgaagaccaacgtgttcaagggccaacagctttttgactggcgatca
gctggaaacatggcagagatagaatttcatggcgagtacctgcaaagcaacgggagcttc
cgagctgaatactcattcgtggagccttga
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