Salvelinus fontinalis (brook trout): 129826246
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Entry
129826246 CDS
T11136
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129826246
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129826246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
129826246
NCBI-ProteinID:
XP_055742737
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All DBs
Position
28:complement(15253310..15293920)
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AA seq
1475 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLLASCLVAGERL
NQEHTQGVIYTVFTSLYGNCIMQEDERYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERFTPAQQERLFGEKGS
EGYRQKVAAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVERLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDGDP
RRKKSLAKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTVAYMTHSQLLCLVDFV
RSVMAGDHLREEEHMLLETMLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRNIG
QQLATSWDSTTTTLSAHIPLVTPFAASRSRSRSELAQQGEAEASSLESLQEVMPDEVLVI
SLGSSPQTIPGMMSENEVLTMQLTDGSQGDIPADDTKHHGKPDKTLRFSLCSDNLEGISE
GPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEHATTQDNLDDKLRKFEIRD
MMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGATVENMLGSLLCLPGSSSV
LLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTEVREVSS
RPSTPGLSVISATSEDRGKTEDLRSECSSDFGGKDSVTSPDGEESSHGAHHSLASPASQA
DSLLAMFDPLSSGEGFSTGTIVRPKVHYARPLHPPPDPPIPEACALGQEPRYSLFTPHCL
AQAELEHTKQRHSYPDRLVRSRSSDIVCQGRRPTSDPGLNRRAAAEERDPAGHFSMGPSS
SPSKDSLKGEVEERKDSDEEKSDRNRPWWKKRFQSAIPKVLYWTAESEVPAPIAFRKRDR
QEKDDVGHERVPQDETLSRNSQAQAAEDILDKYRNIKRTSPSEGATAAAYDTTGELCGEE
GLHDEALQNMSTDDLPDSASQTAQQHDSSKFSFSDAKKKLRLALCSADSVAFPLMAPATT
RNGLPDHTDSEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFDARTCRKLLAAI
AEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMEA
KSLDFIKAFQGCTASDDKTAAVEDFLRYLYGAMAHDAIWQYASEDQLQDAQMAIERSVMN
RIFKLAFYPNQDGDILRDQLLQEHIARLSKVVTANHKALQIPEVYAREAPWPSAQSEIRT
ISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTIQ
YINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtatgtg
gcttcagagaagcagctgatccagcggctcaacggggacgtgctgaagactgctgagaga
ctgtaccgtgctgcctggatcaccaaacagcagaggatcaatctcgacaggctcattctc
accagtgctgaggcctccccggccgaatgctgccagcatgccaaagtgctggaggacaca
cagttcctggacggctacaagactctgggctttcaggagagcatctatggggagttcctg
ggtcgggtgcgcgagaaccctcggctgttggcctcctgcctggtggctggggagaggctg
aaccaggagcacacacagggggtcatttacacggtcttcacctcactctacggcaactgt
atcatgcaggaggatgagcgctacctgctgcaggtcctccgctacttggtggagtttgag
ctgaaggagagcgacaaccctcggcggctgctgcggcggggcacgtgcgccttcagcatc
ctcttcaagctcttctccgaggggctgtactcggccaagcttttcctcaccgccaccctc
cacgagcccatcatgcagctgctggtggaggacgaggaccacctggagacggacccctcc
aaggtgacggagcgcttcacgccggcccagcaggagcgcctctttggggagaagggctcg
gagggctacagacagaaggtggcagccgccgtggaagccaacgaggccaagctggtgacc
ctggtcaacaagttcatcggctacctgaagcagaacacctactgcttcccccacaacctg
cgctggatagtgtctcagatgtacaagacactgtcgtgcgtggaacggctggaggtgggc
gaggtgcggaccatgtgcacggacctgctgctcacctgcttcatctgcccagccatagtc
aaccctgagcagtacggcatcatctcagacgcccctatcaatgaggtggctcgcttcaac
ctcatgcaggtagggcagcttcttcaacagttggcaatggctgacgatgatggagacccc
cggaggaaaaagagtttggccaagttcgataagagctgtgtagctgccttcttggatgtg
gtaatcggagggagagctgtggagacaccgcccatgtcctccatgaacctactagaagga
ctcagcaggactgtggcgtacatgacacacagtcagctcctctgcctggtggactttgta
cggagtgtgatggcaggggaccacctccgggaggaggagcacatgctcctggagaccatg
ctggccaacgtgccccagtcccgcacggtgaagagcaacagtctggagctcaccccctcc
aacaccccccagctctccccagccaccacccccgccaacaaaaaaaacaggaacatagga
caacagttagcaacttcctgggactccacaaccaccaccctgtctgctcacattccatta
gttaccccttttgcagcctcccgcagtcgtagccgttccgagctggcccagcagggggag
gcagaggctagctctctggagtccctgcaggaggttatgccagatgaggtgctggtgatc
tcactaggaagcagcccgcagaccatccctgggatgatgtcagagaatgaggtgttgacc
atgcagctgactgatgggtcacaaggggacattcctgcagatgacaccaagcaccatggc
aagccagacaaaaccctgcgcttctccctctgcagtgacaacctggagggcatctcagag
ggtccatctaaccggtctaattctgtgtcgtctctggacctggagggagagtctgtgtct
gagctgggagctgggccatcagggagcaatggggtggaggctctacaactgctggagcat
gaacatgccaccactcaggacaacctggatgacaaactgcgtaagtttgagatccgcgac
atgatgggcctgacagatgaccgggacatctctgagacagtgagtgagacctggagcaca
gacgtgctgggcagcgactttgaccccaacatggatgaggatcgactgcaggaaatagct
ggggcgactgtagagaacatgctgggcagcctgctgtgcctaccaggctccagctcagtg
ctgctagacccttatggatccaccatctcagagaccaccagcgaggcctggagtgtggag
gtcctgcccagcgactcagaagccccagacctgaagcaggaagagcgtctacaggagttg
gagagctgctcagggctgggcagcacctccgatgacacagaggtcagagaggtcagctcc
cggcccagcaccccagggctcagcgtcatctcagcgacatcagaagatagaggcaagacg
gaggacctacggtcggagtgcagctcggactttggggggaaggactctgtgaccagtcca
gatggggaggagtcgtcccacggagcacaccacagtttggcttctccggcctcgcaggca
gactccttactggccatgttcgatcccctatcctccggggaaggtttctctactggtacc
atcgtgaggcccaaagtgcactacgccaggccccttcatcctccccctgaccctcccatc
ccagaggcctgtgccctaggccaggagccccgctactccctgttcacgccccactgcctg
gcccaagctgagctggagcacaccaagcaacgccactcctacccagacaggctggtacgc
agccgcagctctgatattgtttgccaaggccgccggcctaccagcgacccgggactcaac
cgcagagcggcagccgaggagcgggaccctgccgggcacttctccatggggccgtcctcg
tcccccagcaaggattccctaaaaggagaggttgaggagagaaaggacagtgatgaggaa
aagtctgatcgcaacagaccatggtggaagaaacgttttcagtcagccattcccaaagtg
ctgtattggacggctgagagtgaagtcccagctccgatagccttccggaaaagggacagg
caggagaaagacgatgtgggccatgaacgcgtcccacaagacgaaactctgtccaggaac
tcccaggcccaggcagcagaagacatcctggacaaatacaggaacatcaagaggaccagc
cctagtgaaggagccaccgctgcagcctatgacaccacaggagagctgtgtggagaggag
ggtttacacgacgaagctctgcagaacatgtccacagacgacctgccagactcagccagc
cagacagcccagcaacacgactccagcaagttctcattcagtgatgcaaagaagaagttg
agactggccttgtgttcagcagactctgtggctttccccctcatggctcctgccaccaca
cgcaatgggctgcctgaccacacggactctgaagacaatgagatcgtgtgcttcctgaag
gtccagctggcggaggccatcaacctgcaggataagaaccagatggcccagatccaggag
accactcgctgcgtcagccgctttgacgcacgtacctgcaggaagctgctggcagccatc
gccgaggattacaggaagcgggcgccctacatagcgtatctgacgcggtgtcggcaaggc
ctgcagacgtcccaggcccacctggagcggctgctgcagcgggtgctgagggacaaagag
gtggctaaccgctacttcaccacagtctgtgttcgcctcctactggaacacatggaggcg
aagtccctggacttcatcaaagccttccaggggtgcacagcgtcagatgacaagacggcg
gcagtggaggacttcctgcgctacctgtacggggccatggcccatgatgccatctggcag
tacgccagcgaggaccagctgcaggatgcccagatggccatagagcgcagcgtcatgaac
cgcatcttcaagctggccttctaccccaaccaggacggggacatcctgagagaccagctt
cttcaggaacacatagcgcgtctctcaaaagtggtgacggcaaatcacaaagctcttcaa
atcccagaggtgtatgcgagggaggctccctggccgtctgcccagtcggagatccggacc
atcagtgcctacaagactcctcgggacaaagtgcagtgtatactgcgcatgtgttccacc
atcatgaacctcctgagtctggccaacgaggactctgtccctggagctgacgacttcgtc
cctgtgcttgtctttgtcctgataaaggcaaacccgccctgcctgctgtccactattcag
tacatcaataatttctacgccagccggctgagtggggaggagtgctattggtggatgcag
ttcaccgcggcagtggaattcattaagaccatcgatgatcgcaagtga
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