Salvelinus fontinalis (brook trout): 129826333
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Entry
129826333 CDS
T11136
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129826333
Cilium and associated proteins [BR:
sfon03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
129826333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TTC28_C
TPR_2
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_SusR
RPN7
TPR_16
DUF6340
TPR_14
TPR_NPHP3
TPR_6
PUB
TPR_9
TPR_YpiA_C
TPR_19
HlyE
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
129826333
NCBI-ProteinID:
XP_055742906
LinkDB
All DBs
Position
28:complement(19922456..20177652)
Genome browser
AA seq
2378 aa
AA seq
DB search
MMKWQPRKKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRES
LEPTYQQLQKMKLDKSPFVVVSVIGQELLTAAHHTASVVVLEAALKIGTCSLKLRGSVFS
ALSSAHWSLGNAEKSTGYMQQDLEVSKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHR
HQLVLAMKLKDREAASMALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELG
NMGAVYIAMGDFENAVQCHEQHLGIAKALTNKREEARAYSNLGSAYHYHRNFDKAMSYHT
HVLELAQELEEQPIEMRAYAGLGHAARCMQDLERAKQYHEQQLAIAEGLKDRAAEGRASS
NLGIIHQMKGDYETALKLHKTHLSITQELSDYAAQGRAYGNMGNAYNALGAFDQAVRYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALG
NLGNFHCSRGEFPQAVPYYEQYLRLSPDLQDMESEGKVCHNLGYAHYCLGSYQDAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALG
NLGDIFVCKKDVTGAIQFYEQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHT
QELEVYQELGDVPGECKAHGHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPGVEAQVYG
NMGITKMNVGVMEEAIGYLEQQLATLQQLSGNEAVLDRGRAYGNLGDCYEALGDFEEAIK
YYDQYLSVAQSLNRMQDQEKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQ
AYGELGALHSQLGNYEQAISCLERQLGIARDTQDRSLEGDASCGLGVVYQSMGEYETALR
CHQSDLEIAEETGRPARQGRAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTL
AYGSLGRTHHALQNYSQAVMYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQH
QLYRASALFETIRHEAQHSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQQDSDPYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGIL
KFHEVYLGEGVTEGGPDLHEGGGGGVASGSSLEQHIASAREALGVESYYSRGCSSSETES
EAGDLLDQQFEELNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTVSPAKDGCSS
LPRRPSNLNKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGS
SSNEYLYERFSLIAVPSIQGLGISSKGHSRRVGPASCGGVSMAAVVGNPRLPSSVMDRWL
WGPMPSAEEEALMVSELLGCHPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTP
NPESIPGGAGAGVGTGGRGAGGGKRGSGGKGRKGSFGSSYTIPESLHLQDDGSDAESICD
SPPLQEFLLTAADILDLRLPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSL
WPVPVSASKVFVHAFYTALLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKL
NSPSSLIGQALAEILQYPERARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGG
VPGWHALLTAVGFRLDSAGTGIPAAVFFPTADPGDRLQQCSTTLQSILGLPPPALQALCK
LITASEAGEQLINRAVKNMVGMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHE
FLAALGFDLCEVGQEEVVLKTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLES
LASAQFVSNPLPLGYPSLPFSPPCLDSLASDAISVYSLSSVASTMSFASKSECDFLGHRQ
RGGATAHFSAHKHPHIPRSRSSPHGAAAAAGGGRGDDEEYEGFSIISSEPLGSHCDSLPL
PPGHGQRHLHRGGRGVVSSSNSGAGRGYQVSVSSRGSVSTPTSPVKTSLVPSPNPPLQKV
PGKVSSSDTGESDQSSTETDSTVKSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAG
AEGAAAGATSARSSAFRSSETSAFSRPSSSASVRVQSSPRPKPPSRSSSLQKISSGYNSP
AASETSLKDGSHPSPTLDSHAQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPACSAPSPA
LSYSSTGSACSSPADAPDLDRLRRGVIDEKVVAIHNLKTFWANTASQQQQQHLGPVRALR
GAPGPLVSAKRDVLSLLNLSPRHCSPSDAQDSLELRELGLQSLDRGNKNPSNGHNPRKVA
PSPSISTSSSPGARSIRLPAGNGYKFLSPGRFFPSSKC
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatggcagccccggaagaaggcatacttccgacagggtgttgcccttcagtac
cttggtcgccatgccgacgcgttggccgccttcgcctcggggctggcccaagaccccaag
agcctgcagctactggttggcatggtggaggctgccatgaagtccccactacgagagtcc
ctggaacccacctaccagcagctgcagaagatgaagctggacaagagtccattcgtggtg
gtgtcagtgattggtcaggagctgctgacggcggcccaccacaccgcatccgtagtggtc
ctggaggccgcgttaaagatcggtacctgcagcctcaagctgcgtggctccgtcttctca
gccctcagcagcgcccactggtccctgggcaatgcagagaagagcaccggatacatgcag
caagacctggaggtttccaagacactaggtgaccaaacaggtgaatgccgtgcccatggc
aacctgggctcagcattcttctccaaggggaactaccgcgaggccctgaccaaccaccgc
caccagctggtcctggccatgaagctcaaggacagggaggcagcttctatggctctgagc
agcctgggtcatgtgtatacagccatcggggactaccctaatgccctggccagccacaag
cagtgtgtcctactggcaaagcaatccaaagaccagctgtcagaggcacgagagctgggc
aacatgggcgctgtctacattgctatgggcgactttgaaaacgctgtacaatgccacgag
cagcacctgggcatcgccaaggccctgaccaacaagagggaggaggcccgtgcctacagc
aacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccacacc
catgtgctggagctggcccaggagctggaggagcagcctatagagatgagggcatacgct
gggctggggcacgctgcacgctgcatgcaggacctggagagagccaagcagtaccatgaa
cagcaactggccatcgctgagggcctgaaggacagggctgcagagggaagagcctcctcc
aacctgggcattatccaccagatgaaaggagactatgagactgcactgaaactccacaaa
acccacctctccatcacccaggagctcagtgactatgctgcccagggccgggcctacggt
aacatgggcaatgcctacaacgcgctgggggcctttgaccaggccgtacgctaccaccgc
caggagctacagatctccatggaggtcaatgaccgggcctcacaggcctccacccatggt
aacctggccgtggcctaccaggccctgggggcccacgaccgcgccctgcagcactaccag
aaccacctcaatatcgcccgtgagctgcgagacgtccagagcgaggcccgcgccctcggc
aatttggggaacttccactgctcccggggagagttcccccaagccgtgccctactacgag
cagtacctccgcttgtcccctgacctccaggacatggagagtgaggggaaagtctgccac
aacttgggctacgcccactactgcctgggaagctaccaggacgctgtcaagtactatgag
caggacctggctctggctaaggacctgcatgacaagctgagccaggccaaggcctactgt
aacctgggactggccttcaaggctctgggtgacttcacaaaggcagaggagtgtcagaag
tacctgctctctctagcccagtctcttaataatgcacaggcccgcttcagagccctgggc
aacctaggggacatctttgtctgcaagaaggacgtgactggagctatccaattctatgag
cagcagctggccctggctcaccaggtgaaggagcgcaggatggaggcctgtgcctacgcg
gccctgggtgccacctacagactggtgcagaagtacgacaaggcgctgggctaccacacc
caggagctggaggtgtatcaggagctgggcgatgtgcctggggagtgtaaagcccacggc
cacctggcagccgtctacatggctctggggaagtatgccatggccttcaagagctacgag
gagcagctagagctgggccgcagactgaaggacccgggggtagaggcccaggtctacggc
aacatgggcatcaccaagatgaacgtaggggtgatggaggaggctataggctacctggag
cagcagttggccaccctgcagcagctgagtggcaacgaggccgtgctggaccggggtagg
gcctatggtaacctgggagactgttacgaggctctaggggactttgaagaggccattaaa
tactatgaccagtacctgtctgtggcccagagccttaaccggatgcaggaccaggagaag
gcctaccgaggcctggggaatggacacagggcgatgggtaacctgcagcagtccctggtg
tgttttgagaagcgtctggtggtggcccatgagttgggggagtgtggagggaaggcccag
gcctacggggagctgggggcgctccacagccagttggggaactatgaacaggccatatcc
tgtctggagcgccagctaggcatcgcccgcgacacccaggaccgatcactagagggcgac
gccagctgtggcctgggcgtggtctaccagtccatgggggaatacgagacggccctgcgc
tgccaccagagtgacctggagatcgcagaggagacgggcaggcccgcccgacagggccgt
gcctatggcaacctgggcctcacctacgagtcgctaggcaactatgagcgtgcagtggtg
ttccaggagcagcatctaagtgttgcagctcagaccaacgacctggcggccaagaccctg
gcctacggcagtctggggaggacacaccacgcactgcagaactactcacaggctgtcatg
tacctgcaggaaggcctacgactggcagagcagctggctcggcgtgaggacgaggctaag
atccgccatcgtctggggctgtctctgtgggccagtgggaacctggaggaggcccagcac
cagctctaccgagcatctgcgttgtttgagaccattcgtcatgaggcccagcacagcacc
gactacaaactttctctgtttgacctgcagacctcctcctaccaggcactccagagggtc
cttgtcagcctaggccaccatgacgaggcgttggcggtggcagagcggggtcggacgcgg
gcctttgctgacctgctggtggagaggcagacaggccagcaggactcagacccctacacc
ccagtcacagtggagcacatcctggacacggtgaacagccagagggccctggtgctctac
ttctccatggctgctgggtacctgtacagctggctgctggctccaggagcaggcatcctg
aagttccatgaggtgtacttgggagagggcgtgacagagggtgggccagacctccatgag
ggcgggggagggggtgtggccagcggctcgtctctggagcagcacattgccagtgctcgg
gaggccctgggggtagaatcctactacagcaggggttgttctagcagtgagacagagagt
gaggcaggggacctgttggaccagcagtttgaggagctcaacaacaaactcaactctgtg
actgaccccacaggctttctccgtatggtgtccagaaacaacctgttcaacaggagctgc
cagagtatgactagcctgttcagtaataccgtgtccccagccaaagatggctgctcctct
ctgccccgccgacccagcaacctcaacaaacctcctctccgtgccctctacgacctgctc
atcgcacccatggaagggggcctgatgcattccagtggtcccgtgggcagacacagacag
ctgatattggtattggagggggagttgtacctcatccccttcgcactgctgaagggcagc
tcctctaatgagtacctgtatgaacgcttcagcctcattgccgtgccctccatccagggt
ctagggatcagctccaagggtcattctcggcgggtggggccggcttcctgtgggggcgtg
tccatggcagctgtggtgggtaaccctcgtctgccgtcctctgtgatggaccgctggctg
tgggggcccatgccctcggccgaggaggaggccctcatggtgtctgagctgctgggctgc
catccactggctggatcctctgccaccaaggagagggtgatgagtgccctcactcaggcc
gagtgtgcacacttcgctacccacatctcctggaagctggccgccctggtgctcacaccc
aacccagagagcatacccggcggggcaggggcgggtgtggggactggagggagaggggca
gggggtgggaagagaggcagtggaggcaagggcaggaaaggctcgtttgggagcagctac
accatcccagagagcctgcacctgcaggatgatgggagcgacgcagagagtatctgtgac
agccctcccctgcaggagttcctgctcaccgctgctgacatactggacctgaggctgcct
gtcaaactggtggtgctggggtcataccaggagtccagcagtaaggtgacagcagacggt
gtggtaggtctgaccagggccttccttgctgctggggcccagtgtgtcctggtgtctctg
tggcctgttcctgtgtcagcctccaaagtgttcgtccatgccttttacaccgctctgctc
aacgggaccaaggccagcgctgccctcgcagacgccatgaagactgtccagagcagcaag
cagtactcccacccctccaactgggcaggctacatgctgattggtaatgacgtgaagctg
aacagcccctcgtctctgattggccaggctctagcagagatcctacagtatccagagaga
gcacgggatgctctgcgggtcttactgcaccttgtggagaagtctctccagaggattcag
aacggccagcgtaactccatgtacacgtcccagcagagtgtggagaacaaggtggggggc
gtcccaggctggcatgccctgctgaccgctgtgggcttccgcctggactcggctggcacc
ggcatccctgctgctgtcttcttccccacagcagaccctggagacaggctgcagcagtgt
agcaccaccctgcagtcaatacttggtctaccgcccccagctctccaagccctgtgtaaa
ctcatcaccgcctccgaggcaggagagcagctcatcaaccgggctgttaaaaatatggtg
ggaatgctccaccaggtgctggtccagcttcagacaggggagaaggagcaggacttctct
ctgctgcccatccaagtgtccatcagtgtgcagctctggagactgccaggctgccatgaa
tttctggctgcactaggattcgacctgtgtgaggtgggccaggaggaggtggtactgaag
acgggcaagcaagccaaccgccgcaccatgcactttgccctccagtccctgctggcactg
tttgactccacagagctgccaaagcgtctcagcctggacagctcgtcttctctggagtct
ctggcctcggcccagtttgtctccaaccccctaccgctgggctaccccagcctgcccttc
tccccaccctgcctagacagtctggcctcagacgccatctccgtctacagcctgagctcc
gtggcctccaccatgagctttgcctccaaatcagagtgtgacttcctgggccatcgacag
cgtggtggggccacagcacacttctctgcccacaagcacccgcacattccccgcagtcgc
tcctctcctcacggggcggctgcagcagcaggagggggccggggagatgatgaggagtat
gaaggcttttccatcatcagcagtgagcctctgggaagccactgtgactccctgcctcta
cctccgggtcacgggcagcgccacctccaccgtgggggcaggggtgttgtcagtagttcc
aactcgggcgctgggcggggttaccaggtgtctgtgtcgtcacgaggcagtgtcagcacc
cccacctccccagtcaagaccagcctggttcccagccccaacccccccctccagaaggtg
ccaggcaaggtgagcagctcagacacaggtgagtcggaccagtccagcactgagacagat
agcaccgtcaagtcccaggaggagaagactgtccctctggacccccaggagctggcccag
aagatcctggaggagacgcagagccacctgcgggcggtgggaagtttacaacgggctggg
gctgagggggctgcagctggagctacctcagccaggagctctgccttccgctcctcagag
accagcgccttcagccgtcccagcagcagcgccagtgtccgcgtccagtcctccccacga
cccaaacctccctcccgctcttcctccctgcagaagataagctctggttacaatagccct
gcagcctcggagacctctctaaaggatggcagtcacccctcccctaccctggacagccac
gcccagttcaagctcaaataccccagctccccctatagtggtcacatctcccgctctccc
agtaacgtgtcccccagctctggccaccagtccccggcttgtagtgccccatccccagct
ctctcctactcctccacgggctctgcctgctccagccctgccgatgccccagacctggac
cgcctcaggaggggcgtcatcgatgagaaggttgtggccatccacaacctgaagacattc
tgggccaacacggcgtcccagcaacagcagcagcatctgggtccagtccgtgctctccgt
ggcgccccaggacccctggtctctgccaagagagatgtgctgagccttctgaacctctcc
ccacgacactgctcccccagcgacgcccaagacagcctggagctgcgggagctggggctg
cagtcgttggacaggggcaacaagaacccttccaatggacacaaccccagaaaggtggcc
ccctcgccctctatttccacgagcagcagccctggtgctcgctctatcagactacctgcc
ggcaatggatacaagttcctctcccctggcaggtttttcccatcctccaaatgctga
DBGET
integrated database retrieval system
