Salvelinus fontinalis (brook trout): 129826367
Help
Entry
129826367 CDS
T11136
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129826367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129826367
Spliceosome [BR:
sfon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
129826367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
129826367
NCBI-ProteinID:
XP_055742987
LinkDB
All DBs
Position
28:21184064..21189178
Genome browser
AA seq
497 aa
AA seq
DB search
MNAMVSVKREREIDLEDDEVPVKIGRSSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLS
HINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDI
TYVLKPTFTRQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPL
RNYFLEEENYCGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK
NFQITKQGDAVDFLSWFMNALHGALGGTKKKPSSLTKVFQGSMRIFSKKLPHPDLPPEEK
VALLLKEEYQEEMSDTTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEY
KTYKENFLKRFQLLKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQV
TEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQ
IWKRRESEDDTTNHTGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctatggtatctgtaaaacgggagcgagaaattgacttggaagacgatgaagta
cctgtgaaaattggccgttcgtccgaggaccgcagaagtcgccattgtccctacctcgac
acaataaataggagtgtactggactttgattttgagaagctatgctccatttccctctcc
cacatcaatgtatacgcctgtctcatctgtgggaaatacttccaaggtagagggctgaag
tcccatgcctacactcacagtgtgcagttcacacaccatgtgttcctcaatctgcatacc
ctcaagttctactgtctaccagataactacgagatcattgactcgtcgttggaagacatc
acgtatgtactaaagcccacgttcaccagacagcacatctctggattggataagcaggga
aagctgtatcgagcctatgatggcaccacctatctgcctggcatcgtagggctcaacaac
atcaaggctaatgactacgctaatgtggtgctgcaggccctgtccaatgtgcccccactg
cggaactactttttggaagaggagaattactgcggcatccgtaggccgccgggtgacatc
atgttcctgctggtgcagcgattcggtgagctgatgcgcaaactgtggaacccacggaac
ttcaaggcccatgtgtcgccccacgagatgttgcaggccgtagtgctgtgcagcaagaag
aacttccagatcaccaagcaaggggatgctgtggacttcctgtcatggttcatgaacgct
ctgcacggcgcactgggaggaaccaagaagaaaccctcaagccttaccaaagtgttccag
ggttccatgcgtatcttttccaagaagcttcctcacccagatttgccaccagaagagaag
gtggctctgcttctgaaggaggagtaccaggaggagatgtctgacaccaccttcctcttc
ttgacccttgacctccccacagccccgctgtacaaggatgagaaggagcagctcatcatc
ccacaggtccccctcttcaacatcctggccaagttcaatggcaacacagagaaggagtat
aaaacatacaaagagaatttcctcaagaggttccagttgctcaagctgcccccctatctc
atcttctgcatcaagaggttcaccaagaacaacttctttgtggagaagaaccccaccatt
gtcaacttccccatcacgaacgtagaccttcgtgagtatctgacagaggaagcacaggtc
acagagaagaacacaacctatgacctggtggccaatgtggtgcatgatgggaagcccact
gagggggcatacagaatacatgtcctgcatcatggcactggaaagtggtacgagctccag
gacctgcaggtgacagatatactgccccagatgatcacactgtcagaggcttacattcag
atttggaaaagaagagagagtgaagatgacacaactaaccacactggggcgtga
DBGET
integrated database retrieval system
